RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 PLB1Q6P1J6 1458 aa27.72■■■□□ 2.03
GRAMD1A-207ENST00000598118 PRG4Q92954 1404 aaPredicted RBP27.71■■■□□ 2.03
GRAMD1A-207ENST00000598118 FOXD1Q16676 465 aa27.71■■■□□ 2.03
GRAMD1A-207ENST00000598118 CDK11AQ9UQ88 783 aaPredicted RBP27.71■■■□□ 2.03
GRAMD1A-207ENST00000598118 ANP32CO43423 234 aa27.7■■■□□ 2.02
GRAMD1A-207ENST00000598118 FBLN2P98095 1184 aa27.69■■■□□ 2.02
GRAMD1A-207ENST00000598118 CCER2I3L3R5 266 aa27.68■■■□□ 2.02
GRAMD1A-207ENST00000598118 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
GRAMD1A-207ENST00000598118 NUP160Q12769 1436 aa27.63■■■□□ 2.01
GRAMD1A-207ENST00000598118 L3MBTL2Q969R5 705 aa27.62■■■□□ 2.01
GRAMD1A-207ENST00000598118 KIF14Q15058 1648 aa27.62■■■□□ 2.01
GRAMD1A-207ENST00000598118 JPH4Q96JJ6 628 aa27.62■■■□□ 2.01
GRAMD1A-207ENST00000598118 HSPA5P11021 654 aaKnown RBP27.61■■■□□ 2.01
GRAMD1A-207ENST00000598118 ANKRD30BQ9BXX2 1392 aa27.61■■■□□ 2.01
GRAMD1A-207ENST00000598118 CAMSAP2Q08AD1 1489 aa27.6■■■□□ 2.01
GRAMD1A-207ENST00000598118 GPATCH8Q9UKJ3 1502 aaKnown RBP27.59■■■□□ 2.01
GRAMD1A-207ENST00000598118 ADCY10Q96PN6 1610 aa27.58■■■□□ 2.01
GRAMD1A-207ENST00000598118 ITSN2Q9NZM3 1697 aa27.58■■■□□ 2.01
GRAMD1A-207ENST00000598118 CFDP1Q9UEE9 299 aaPredicted RBP27.58■■■□□ 2.01
GRAMD1A-207ENST00000598118 CARMIL2Q6F5E8 1435 aa27.57■■■□□ 2
GRAMD1A-207ENST00000598118 WASHC2AQ641Q2 1341 aa27.56■■■□□ 2
GRAMD1A-207ENST00000598118 RPRD2Q5VT52 1461 aaKnown RBP27.55■■■□□ 2
GRAMD1A-207ENST00000598118 SLC4A1APQ9BWU0 796 aaKnown RBP27.52■■■□□ 2
GRAMD1A-207ENST00000598118 NCOA1Q15788 1441 aa27.51■■■□□ 2
GRAMD1A-207ENST00000598118 EIF4G2P78344 907 aaKnown RBP eCLIP27.51■■□□□ 1.99
GRAMD1A-207ENST00000598118 ZNF777Q9ULD5 760 aaPredicted RBP27.51■■□□□ 1.99
GRAMD1A-207ENST00000598118 ADGBQ8N7X0 1667 aa27.51■■□□□ 1.99
GRAMD1A-207ENST00000598118 TEX14Q8IWB6 1497 aa27.5■■□□□ 1.99
GRAMD1A-207ENST00000598118 CROCC2H7BZ55 1655 aa27.49■■□□□ 1.99
GRAMD1A-207ENST00000598118 PZPP20742 1482 aa27.49■■□□□ 1.99
GRAMD1A-207ENST00000598118 NBPF8Q3BBV2 869 aa27.48■■□□□ 1.99
GRAMD1A-207ENST00000598118 ABCA8O94911 1581 aa27.48■■□□□ 1.99
GRAMD1A-207ENST00000598118 ADGRL2O95490 1459 aa27.44■■□□□ 1.98
GRAMD1A-207ENST00000598118 CDC42BPAQ5VT25 1732 aa27.44■■□□□ 1.98
GRAMD1A-207ENST00000598118 C11orf95C9JLR9 678 aaPredicted RBP27.43■■□□□ 1.98
GRAMD1A-207ENST00000598118 ATP10BO94823 1461 aa27.42■■□□□ 1.98
GRAMD1A-207ENST00000598118 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
GRAMD1A-207ENST00000598118 ABCC10Q5T3U5 1492 aa27.4■■□□□ 1.98
GRAMD1A-207ENST00000598118 FKBP8Q14318 412 aa27.36■■□□□ 1.97
GRAMD1A-207ENST00000598118 ANKRD30AQ9BXX3 1397 aa27.36■■□□□ 1.97
GRAMD1A-207ENST00000598118 CNTLNQ9NXG0 1405 aa27.35■■□□□ 1.97
GRAMD1A-207ENST00000598118 CCDC7Q96M83 1385 aa27.35■■□□□ 1.97
GRAMD1A-207ENST00000598118 SPATA31E1Q6ZUB1 1445 aa27.33■■□□□ 1.97
GRAMD1A-207ENST00000598118 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
GRAMD1A-207ENST00000598118 BCANQ96GW7 911 aa27.32■■□□□ 1.96
GRAMD1A-207ENST00000598118 ANKRD50Q9ULJ7 1429 aa27.32■■□□□ 1.96
GRAMD1A-207ENST00000598118 PKD2Q13563 968 aa27.29■■□□□ 1.96
GRAMD1A-207ENST00000598118 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
GRAMD1A-207ENST00000598118 C9orf84Q5VXU9 1444 aa27.27■■□□□ 1.96
GRAMD1A-207ENST00000598118 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
GRAMD1A-207ENST00000598118 SHANK2Q9UPX8 1470 aa27.26■■□□□ 1.96
GRAMD1A-207ENST00000598118 CCDC184Q52MB2 194 aa27.25■■□□□ 1.95
GRAMD1A-207ENST00000598118 PTPRGP23470 1445 aa27.24■■□□□ 1.95
GRAMD1A-207ENST00000598118 KIF7Q2M1P5 1343 aa27.23■■□□□ 1.95
GRAMD1A-207ENST00000598118 HNRNPUQ00839 825 aaKnown RBP eCLIP27.23■■□□□ 1.95
GRAMD1A-207ENST00000598118 HNRNPMP52272 730 aaKnown RBP eCLIP27.21■■□□□ 1.95
GRAMD1A-207ENST00000598118 TSHZ2Q9NRE2 1034 aa27.21■■□□□ 1.95
GRAMD1A-207ENST00000598118 PRKRIP1Q9H875 184 aaPredicted RBP27.2■■□□□ 1.95
GRAMD1A-207ENST00000598118 NUP155O75694 1391 aa27.2■■□□□ 1.94
GRAMD1A-207ENST00000598118 CHD1O14646 1710 aa27.2■■□□□ 1.94
GRAMD1A-207ENST00000598118 CDC42BPBQ9Y5S2 1711 aa27.18■■□□□ 1.94
GRAMD1A-207ENST00000598118 NEFLP07196 543 aa27.18■■□□□ 1.94
GRAMD1A-207ENST00000598118 TSPY4P0CV99 314 aa27.18■■□□□ 1.94
GRAMD1A-207ENST00000598118 TSPY10P0CW01 314 aa27.18■■□□□ 1.94
GRAMD1A-207ENST00000598118 ARHGEF5Q12774 1597 aa27.16■■□□□ 1.94
GRAMD1A-207ENST00000598118 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
GRAMD1A-207ENST00000598118 SAMD9LQ8IVG5 1584 aa27.14■■□□□ 1.94
GRAMD1A-207ENST00000598118 KDM5DQ9BY66 1539 aa27.14■■□□□ 1.94
GRAMD1A-207ENST00000598118 KIF15Q9NS87 1388 aa27.14■■□□□ 1.93
GRAMD1A-207ENST00000598118 BCORL1Q5H9F3 1711 aa27.14■■□□□ 1.93
GRAMD1A-207ENST00000598118 PREX2Q70Z35 1606 aa27.13■■□□□ 1.93
GRAMD1A-207ENST00000598118 USP47Q96K76 1375 aa27.11■■□□□ 1.93
GRAMD1A-207ENST00000598118 KDM5CP41229 1560 aa27.09■■□□□ 1.93
GRAMD1A-207ENST00000598118 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
GRAMD1A-207ENST00000598118 CCDC141Q6ZP82 1450 aa27.07■■□□□ 1.92
GRAMD1A-207ENST00000598118 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
GRAMD1A-207ENST00000598118 MRS2Q9HD23 443 aa27.05■■□□□ 1.92
GRAMD1A-207ENST00000598118 FAM9BQ8IZU0 186 aa27.04■■□□□ 1.92
GRAMD1A-207ENST00000598118 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
GRAMD1A-207ENST00000598118 TTC37Q6PGP7 1564 aa27.04■■□□□ 1.92
GRAMD1A-207ENST00000598118 RALGAPBQ86X10 1494 aa27.02■■□□□ 1.92
GRAMD1A-207ENST00000598118 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
GRAMD1A-207ENST00000598118 ARHGEF12Q9NZN5 1544 aa27.01■■□□□ 1.91
GRAMD1A-207ENST00000598118 SYCP2Q9BX26 1530 aa27■■□□□ 1.91
GRAMD1A-207ENST00000598118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27■■□□□ 1.91
GRAMD1A-207ENST00000598118 FAM135AQ9P2D6 1515 aa26.98■■□□□ 1.91
GRAMD1A-207ENST00000598118 RSPH4AQ5TD94 716 aa26.97■■□□□ 1.91
GRAMD1A-207ENST00000598118 POLR3GLQ9BT43 218 aa26.97■■□□□ 1.91
GRAMD1A-207ENST00000598118 KDM2AQ9Y2K7 1162 aa26.97■■□□□ 1.91
GRAMD1A-207ENST00000598118 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
GRAMD1A-207ENST00000598118 CARD11Q9BXL7 1154 aa26.95■■□□□ 1.9
GRAMD1A-207ENST00000598118 DCAF11Q8TEB1 546 aa26.93■■□□□ 1.9
GRAMD1A-207ENST00000598118 ABCC2Q92887 1545 aa26.93■■□□□ 1.9
GRAMD1A-207ENST00000598118 IRX6P78412 446 aaPredicted RBP26.92■■□□□ 1.9
GRAMD1A-207ENST00000598118 MAST1Q9Y2H9 1570 aa26.92■■□□□ 1.9
GRAMD1A-207ENST00000598118 ARID4BQ4LE39 1312 aaPredicted RBP26.92■■□□□ 1.9
GRAMD1A-207ENST00000598118 MYO5CQ9NQX4 1742 aa26.91■■□□□ 1.9
GRAMD1A-207ENST00000598118 CNGB1Q14028 1251 aaPredicted RBP26.91■■□□□ 1.9
GRAMD1A-207ENST00000598118 ZBED9Q6R2W3 1325 aa26.89■■□□□ 1.9
GRAMD1A-207ENST00000598118 UNC13BO14795 1591 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms