RNA–Protein interactions for RNA: ENST00000595566.1

LINC01872-202, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-202ENST00000595566 TOM1O60784 492 aa12.85□□□□□ -0.35
LINC01872-202ENST00000595566 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
LINC01872-202ENST00000595566 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
LINC01872-202ENST00000595566 NCKAP5LQ9HCH0 1330 aa12.84□□□□□ -0.35
LINC01872-202ENST00000595566 ATP10BO94823 1461 aa12.81□□□□□ -0.36
LINC01872-202ENST00000595566 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
LINC01872-202ENST00000595566 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
LINC01872-202ENST00000595566 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
LINC01872-202ENST00000595566 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
LINC01872-202ENST00000595566 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
LINC01872-202ENST00000595566 HECW1Q76N89 1606 aa12.77□□□□□ -0.37
LINC01872-202ENST00000595566 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
LINC01872-202ENST00000595566 ATP10AO60312 1499 aa12.76□□□□□ -0.37
LINC01872-202ENST00000595566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
LINC01872-202ENST00000595566 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
LINC01872-202ENST00000595566 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
LINC01872-202ENST00000595566 C3P01024 1663 aa12.74□□□□□ -0.37
LINC01872-202ENST00000595566 SETD1AO15047 1707 aaKnown RBP12.72□□□□□ -0.37
LINC01872-202ENST00000595566 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
LINC01872-202ENST00000595566 PKD2Q13563 968 aa12.71□□□□□ -0.37
LINC01872-202ENST00000595566 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
LINC01872-202ENST00000595566 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
LINC01872-202ENST00000595566 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
LINC01872-202ENST00000595566 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
LINC01872-202ENST00000595566 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
LINC01872-202ENST00000595566 UPF1Q92900 1129 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01872-202ENST00000595566 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
LINC01872-202ENST00000595566 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
LINC01872-202ENST00000595566 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
LINC01872-202ENST00000595566 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
LINC01872-202ENST00000595566 CPS1P31327 1500 aa12.64□□□□□ -0.39
LINC01872-202ENST00000595566 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
LINC01872-202ENST00000595566 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
LINC01872-202ENST00000595566 SHANK2Q9UPX8 1470 aa12.61□□□□□ -0.39
LINC01872-202ENST00000595566 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
LINC01872-202ENST00000595566 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
LINC01872-202ENST00000595566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC01872-202ENST00000595566 CTTNBP2Q8WZ74 1663 aa12.59□□□□□ -0.39
LINC01872-202ENST00000595566 NPATQ14207 1427 aa12.59□□□□□ -0.39
LINC01872-202ENST00000595566 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
LINC01872-202ENST00000595566 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
LINC01872-202ENST00000595566 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
LINC01872-202ENST00000595566 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
LINC01872-202ENST00000595566 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
LINC01872-202ENST00000595566 AGLP35573 1532 aa12.54□□□□□ -0.4
LINC01872-202ENST00000595566 ZMYM3Q14202 1370 aa12.54□□□□□ -0.4
LINC01872-202ENST00000595566 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
LINC01872-202ENST00000595566 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
LINC01872-202ENST00000595566 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
LINC01872-202ENST00000595566 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.4
LINC01872-202ENST00000595566 ZNF142P52746 1687 aaPredicted RBP12.52□□□□□ -0.4
LINC01872-202ENST00000595566 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
LINC01872-202ENST00000595566 PLCH2O75038 1416 aa12.52□□□□□ -0.41
LINC01872-202ENST00000595566 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
LINC01872-202ENST00000595566 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
LINC01872-202ENST00000595566 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
LINC01872-202ENST00000595566 VWDEQ8N2E2 1590 aa12.48□□□□□ -0.41
LINC01872-202ENST00000595566 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
LINC01872-202ENST00000595566 KDM5CP41229 1560 aa12.47□□□□□ -0.41
LINC01872-202ENST00000595566 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
LINC01872-202ENST00000595566 MROH2AA6NES4 1674 aa12.46□□□□□ -0.41
LINC01872-202ENST00000595566 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
LINC01872-202ENST00000595566 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
LINC01872-202ENST00000595566 POLR1AO95602 1720 aaPredicted RBP12.44□□□□□ -0.42
LINC01872-202ENST00000595566 DNMT1P26358 1616 aaKnown RBP12.43□□□□□ -0.42
LINC01872-202ENST00000595566 A2ML1A8K2U0 1454 aa12.41□□□□□ -0.42
LINC01872-202ENST00000595566 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
LINC01872-202ENST00000595566 ANKLE2Q86XL3 938 aa12.41□□□□□ -0.42
LINC01872-202ENST00000595566 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
LINC01872-202ENST00000595566 CLTCQ00610 1675 aaKnown RBP12.39□□□□□ -0.43
LINC01872-202ENST00000595566 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
LINC01872-202ENST00000595566 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
LINC01872-202ENST00000595566 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
LINC01872-202ENST00000595566 RXRBP28702 533 aa12.37□□□□□ -0.43
LINC01872-202ENST00000595566 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
LINC01872-202ENST00000595566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01872-202ENST00000595566 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
LINC01872-202ENST00000595566 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
LINC01872-202ENST00000595566 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
LINC01872-202ENST00000595566 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
LINC01872-202ENST00000595566 ARHGAP5Q13017 1502 aa12.35□□□□□ -0.43
LINC01872-202ENST00000595566 SYNMO15061 1565 aa12.35□□□□□ -0.43
LINC01872-202ENST00000595566 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
LINC01872-202ENST00000595566 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
LINC01872-202ENST00000595566 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
LINC01872-202ENST00000595566 GGT6Q6P531 493 aa12.33□□□□□ -0.44
LINC01872-202ENST00000595566 MED14O60244 1454 aa12.33□□□□□ -0.44
LINC01872-202ENST00000595566 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
LINC01872-202ENST00000595566 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
LINC01872-202ENST00000595566 FOXD1Q16676 465 aa12.31□□□□□ -0.44
LINC01872-202ENST00000595566 THEMISQ8N1K5 641 aaPredicted RBP12.31□□□□□ -0.44
LINC01872-202ENST00000595566 ABCC1P33527 1531 aa12.31□□□□□ -0.44
LINC01872-202ENST00000595566 JCADQ9P266 1359 aa12.3□□□□□ -0.44
LINC01872-202ENST00000595566 IQGAP1P46940 1657 aa12.3□□□□□ -0.44
LINC01872-202ENST00000595566 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
LINC01872-202ENST00000595566 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
LINC01872-202ENST00000595566 TNRQ92752 1358 aa12.29□□□□□ -0.44
LINC01872-202ENST00000595566 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
LINC01872-202ENST00000595566 ROBO1Q9Y6N7 1651 aa12.29□□□□□ -0.44
LINC01872-202ENST00000595566 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms