RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ANP32EQ9BTT0 268 aa21.45■■□□□ 1.02
ZNF541-205ENST00000595558 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
ZNF541-205ENST00000595558 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
ZNF541-205ENST00000595558 RBM19Q9Y4C8 960 aaKnown RBP21.4■■□□□ 1.02
ZNF541-205ENST00000595558 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
ZNF541-205ENST00000595558 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.02
ZNF541-205ENST00000595558 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.01
ZNF541-205ENST00000595558 IRX6P78412 446 aaPredicted RBP21.39■■□□□ 1.01
ZNF541-205ENST00000595558 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
ZNF541-205ENST00000595558 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
ZNF541-205ENST00000595558 TCOF1Q13428 1488 aaKnown RBP21.37■■□□□ 1.01
ZNF541-205ENST00000595558 ABCC5O15440 1437 aa21.36■■□□□ 1.01
ZNF541-205ENST00000595558 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
ZNF541-205ENST00000595558 SYNJ2O15056 1496 aa21.34■■□□□ 1.01
ZNF541-205ENST00000595558 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
ZNF541-205ENST00000595558 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1.01
ZNF541-205ENST00000595558 DAPK1P53355 1430 aa21.33■■□□□ 1.01
ZNF541-205ENST00000595558 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
ZNF541-205ENST00000595558 MIA2Q96PC5 1412 aa21.31■■□□□ 1
ZNF541-205ENST00000595558 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
ZNF541-205ENST00000595558 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
ZNF541-205ENST00000595558 CNGB1Q14028 1251 aaPredicted RBP21.29■■□□□ 1
ZNF541-205ENST00000595558 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
ZNF541-205ENST00000595558 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
ZNF541-205ENST00000595558 KIF14Q15058 1648 aa21.27■■□□□ 1
ZNF541-205ENST00000595558 ZNF326Q5BKZ1 582 aaKnown RBP21.26■□□□□ 0.99
ZNF541-205ENST00000595558 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
ZNF541-205ENST00000595558 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
ZNF541-205ENST00000595558 TROQ12816 1431 aaPredicted RBP21.24■□□□□ 0.99
ZNF541-205ENST00000595558 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.99
ZNF541-205ENST00000595558 GPATCH8Q9UKJ3 1502 aaKnown RBP21.23■□□□□ 0.99
ZNF541-205ENST00000595558 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
ZNF541-205ENST00000595558 NUP160Q12769 1436 aa21.21■□□□□ 0.99
ZNF541-205ENST00000595558 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
ZNF541-205ENST00000595558 CAMSAP2Q08AD1 1489 aa21.2■□□□□ 0.98
ZNF541-205ENST00000595558 MSH5O43196 834 aa21.19■□□□□ 0.98
ZNF541-205ENST00000595558 ANKRD30BQ9BXX2 1392 aa21.19■□□□□ 0.98
ZNF541-205ENST00000595558 FAM9BQ8IZU0 186 aa21.18■□□□□ 0.98
ZNF541-205ENST00000595558 ATP10BO94823 1461 aa21.17■□□□□ 0.98
ZNF541-205ENST00000595558 PKD2Q13563 968 aa21.17■□□□□ 0.98
ZNF541-205ENST00000595558 CNTLNQ9NXG0 1405 aa21.16■□□□□ 0.98
ZNF541-205ENST00000595558 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
ZNF541-205ENST00000595558 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
ZNF541-205ENST00000595558 DNMT1P26358 1616 aaKnown RBP21.14■□□□□ 0.98
ZNF541-205ENST00000595558 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.98
ZNF541-205ENST00000595558 CCDC7Q96M83 1385 aa21.14■□□□□ 0.97
ZNF541-205ENST00000595558 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
ZNF541-205ENST00000595558 PTPRGP23470 1445 aa21.12■□□□□ 0.97
ZNF541-205ENST00000595558 SENP3-EIF4A1A0A087X0R7 540 aa21.1■□□□□ 0.97
ZNF541-205ENST00000595558 MRS2Q9HD23 443 aa21.1■□□□□ 0.97
ZNF541-205ENST00000595558 RPRD2Q5VT52 1461 aaKnown RBP21.09■□□□□ 0.97
ZNF541-205ENST00000595558 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.97
ZNF541-205ENST00000595558 PZPP20742 1482 aa21.08■□□□□ 0.97
ZNF541-205ENST00000595558 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.96
ZNF541-205ENST00000595558 KIF7Q2M1P5 1343 aa21.07■□□□□ 0.96
ZNF541-205ENST00000595558 NUP155O75694 1391 aa21.05■□□□□ 0.96
ZNF541-205ENST00000595558 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
ZNF541-205ENST00000595558 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
ZNF541-205ENST00000595558 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
ZNF541-205ENST00000595558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.96
ZNF541-205ENST00000595558 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
ZNF541-205ENST00000595558 ABCA8O94911 1581 aa21.03■□□□□ 0.96
ZNF541-205ENST00000595558 B4GALNT3Q6L9W6 998 aa21.02■□□□□ 0.96
ZNF541-205ENST00000595558 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
ZNF541-205ENST00000595558 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.95
ZNF541-205ENST00000595558 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
ZNF541-205ENST00000595558 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
ZNF541-205ENST00000595558 C9orf84Q5VXU9 1444 aa20.99■□□□□ 0.95
ZNF541-205ENST00000595558 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
ZNF541-205ENST00000595558 CDC42BPAQ5VT25 1732 aa20.97■□□□□ 0.95
ZNF541-205ENST00000595558 RGL3Q3MIN7 710 aa20.95■□□□□ 0.94
ZNF541-205ENST00000595558 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
ZNF541-205ENST00000595558 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
ZNF541-205ENST00000595558 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
ZNF541-205ENST00000595558 CHD1O14646 1710 aa20.93■□□□□ 0.94
ZNF541-205ENST00000595558 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
ZNF541-205ENST00000595558 ITSN2Q9NZM3 1697 aa20.92■□□□□ 0.94
ZNF541-205ENST00000595558 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
ZNF541-205ENST00000595558 ADCY10Q96PN6 1610 aa20.9■□□□□ 0.94
ZNF541-205ENST00000595558 BCL11AQ9H165 835 aa20.9■□□□□ 0.94
ZNF541-205ENST00000595558 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
ZNF541-205ENST00000595558 MBD5Q9P267 1494 aa20.89■□□□□ 0.93
ZNF541-205ENST00000595558 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
ZNF541-205ENST00000595558 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
ZNF541-205ENST00000595558 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
ZNF541-205ENST00000595558 USP47Q96K76 1375 aa20.85■□□□□ 0.93
ZNF541-205ENST00000595558 CARD11Q9BXL7 1154 aa20.85■□□□□ 0.93
ZNF541-205ENST00000595558 ADGBQ8N7X0 1667 aa20.84■□□□□ 0.93
ZNF541-205ENST00000595558 CROCC2H7BZ55 1655 aa20.84■□□□□ 0.93
ZNF541-205ENST00000595558 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.93
ZNF541-205ENST00000595558 ST20-MTHFSA0A0A6YYL1 179 aa20.83■□□□□ 0.92
ZNF541-205ENST00000595558 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
ZNF541-205ENST00000595558 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
ZNF541-205ENST00000595558 SYCP2Q9BX26 1530 aa20.81■□□□□ 0.92
ZNF541-205ENST00000595558 CDC42BPBQ9Y5S2 1711 aa20.8■□□□□ 0.92
ZNF541-205ENST00000595558 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
ZNF541-205ENST00000595558 NBPF1Q3BBV0 1214 aa20.8■□□□□ 0.92
ZNF541-205ENST00000595558 AFAP1Q8N556 730 aa20.79■□□□□ 0.92
ZNF541-205ENST00000595558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.92
ZNF541-205ENST00000595558 SMG6Q86US8 1419 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms