RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 HECW1Q76N89 1606 aa30.91■■■□□ 2.54
PDE4C-205ENST00000593594 SIGLEC1Q9BZZ2 1709 aa30.91■■■□□ 2.54
PDE4C-205ENST00000593594 ARHGAP35Q9NRY4 1499 aa30.89■■■□□ 2.53
PDE4C-205ENST00000593594 PLPPR3Q6T4P5 718 aa30.86■■■□□ 2.53
PDE4C-205ENST00000593594 EFCAB2Q5VUJ9 269 aa30.84■■■□□ 2.53
PDE4C-205ENST00000593594 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
PDE4C-205ENST00000593594 MLECQ14165 292 aa30.83■■■□□ 2.53
PDE4C-205ENST00000593594 MYO5CQ9NQX4 1742 aa30.81■■■□□ 2.52
PDE4C-205ENST00000593594 HSPA2P54652 639 aa30.81■■■□□ 2.52
PDE4C-205ENST00000593594 ATP10AO60312 1499 aa30.78■■■□□ 2.52
PDE4C-205ENST00000593594 KIF14Q15058 1648 aa30.78■■■□□ 2.52
PDE4C-205ENST00000593594 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
PDE4C-205ENST00000593594 TROQ12816 1431 aaPredicted RBP30.76■■■□□ 2.51
PDE4C-205ENST00000593594 FER1L4A9Z1Z3 1794 aa30.76■■■□□ 2.51
PDE4C-205ENST00000593594 C9orf84Q5VXU9 1444 aa30.74■■■□□ 2.51
PDE4C-205ENST00000593594 ARHGEF12Q9NZN5 1544 aa30.72■■■□□ 2.51
PDE4C-205ENST00000593594 ARHGAP5Q13017 1502 aa30.71■■■□□ 2.51
PDE4C-205ENST00000593594 CLIP1P30622 1438 aa30.71■■■□□ 2.51
PDE4C-205ENST00000593594 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.51
PDE4C-205ENST00000593594 AFAP1Q8N556 730 aa30.68■■■□□ 2.5
PDE4C-205ENST00000593594 LRRIQ1Q96JM4 1722 aa30.67■■■□□ 2.5
PDE4C-205ENST00000593594 KDM5CP41229 1560 aa30.66■■■□□ 2.5
PDE4C-205ENST00000593594 CEBPAP49715 358 aaPredicted RBP30.6■■■□□ 2.49
PDE4C-205ENST00000593594 MYT1LQ9UL68 1186 aa30.6■■■□□ 2.49
PDE4C-205ENST00000593594 CDC42BPBQ9Y5S2 1711 aa30.59■■■□□ 2.49
PDE4C-205ENST00000593594 DIP2CQ9Y2E4 1556 aa30.57■■■□□ 2.48
PDE4C-205ENST00000593594 CASKIN1Q8WXD9 1431 aa30.56■■■□□ 2.48
PDE4C-205ENST00000593594 PREX1Q8TCU6 1659 aa30.55■■■□□ 2.48
PDE4C-205ENST00000593594 CCDC18Q5T9S5 1454 aa30.55■■■□□ 2.48
PDE4C-205ENST00000593594 MLH3Q9UHC1 1453 aa30.54■■■□□ 2.48
PDE4C-205ENST00000593594 PREX2Q70Z35 1606 aa30.53■■■□□ 2.48
PDE4C-205ENST00000593594 REREQ9P2R6 1566 aa30.53■■■□□ 2.48
PDE4C-205ENST00000593594 CERKQ8TCT0 537 aa30.52■■■□□ 2.48
PDE4C-205ENST00000593594 TRAPPC8Q9Y2L5 1435 aa30.51■■■□□ 2.47
PDE4C-205ENST00000593594 ABCA6Q8N139 1617 aa30.51■■■□□ 2.47
PDE4C-205ENST00000593594 ABCC1P33527 1531 aa30.5■■■□□ 2.47
PDE4C-205ENST00000593594 ITSN2Q9NZM3 1697 aa30.46■■■□□ 2.47
PDE4C-205ENST00000593594 UHRF1BP1Q6BDS2 1440 aa30.45■■■□□ 2.46
PDE4C-205ENST00000593594 AGLP35573 1532 aa30.44■■■□□ 2.46
PDE4C-205ENST00000593594 SETD1BQ9UPS6 1966 aaKnown RBP30.44■■■□□ 2.46
PDE4C-205ENST00000593594 FYCO1Q9BQS8 1478 aa30.42■■■□□ 2.46
PDE4C-205ENST00000593594 CDC42BPAQ5VT25 1732 aa30.42■■■□□ 2.46
PDE4C-205ENST00000593594 DMRT2Q9Y5R5 561 aa30.4■■■□□ 2.46
PDE4C-205ENST00000593594 STRCQ7RTU9 1775 aa30.39■■■□□ 2.46
PDE4C-205ENST00000593594 ESF1Q9H501 851 aaKnown RBP30.39■■■□□ 2.46
PDE4C-205ENST00000593594 KIDINS220Q9ULH0 1771 aa30.38■■■□□ 2.45
PDE4C-205ENST00000593594 C3P01024 1663 aa30.38■■■□□ 2.45
PDE4C-205ENST00000593594 ZNF777Q9ULD5 760 aaPredicted RBP30.35■■■□□ 2.45
PDE4C-205ENST00000593594 SAMD9LQ8IVG5 1584 aa30.32■■■□□ 2.45
PDE4C-205ENST00000593594 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
PDE4C-205ENST00000593594 CNTLNQ9NXG0 1405 aa30.3■■■□□ 2.44
PDE4C-205ENST00000593594 SYCP2Q9BX26 1530 aa30.28■■■□□ 2.44
PDE4C-205ENST00000593594 SPAG9O60271 1321 aaKnown RBP30.27■■■□□ 2.44
PDE4C-205ENST00000593594 HNRNPMP52272 730 aaKnown RBP eCLIP30.27■■■□□ 2.44
PDE4C-205ENST00000593594 PTPRTO14522 1441 aa30.25■■■□□ 2.43
PDE4C-205ENST00000593594 CFDP1Q9UEE9 299 aaPredicted RBP30.22■■■□□ 2.43
PDE4C-205ENST00000593594 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
PDE4C-205ENST00000593594 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
PDE4C-205ENST00000593594 CCNB3Q8WWL7 1395 aa30.19■■■□□ 2.42
PDE4C-205ENST00000593594 ATP7AQ04656 1500 aa30.19■■■□□ 2.42
PDE4C-205ENST00000593594 MROH2AA6NES4 1674 aa30.18■■■□□ 2.42
PDE4C-205ENST00000593594 NPATQ14207 1427 aa30.18■■■□□ 2.42
PDE4C-205ENST00000593594 SUPT6HQ7KZ85 1726 aaKnown RBP30.18■■■□□ 2.42
PDE4C-205ENST00000593594 ZMYM3Q14202 1370 aa30.17■■■□□ 2.42
PDE4C-205ENST00000593594 NCOA1Q15788 1441 aa30.17■■■□□ 2.42
PDE4C-205ENST00000593594 MTUS2Q5JR59 1369 aa30.15■■■□□ 2.42
PDE4C-205ENST00000593594 INO80Q9ULG1 1556 aaPredicted RBP30.15■■■□□ 2.42
PDE4C-205ENST00000593594 A2MP01023 1474 aa30.13■■■□□ 2.41
PDE4C-205ENST00000593594 PLXNC1O60486 1568 aa30.12■■■□□ 2.41
PDE4C-205ENST00000593594 LTBP4Q8N2S1 1624 aa30.1■■■□□ 2.41
PDE4C-205ENST00000593594 CAMSAP1Q5T5Y3 1602 aa30.09■■■□□ 2.41
PDE4C-205ENST00000593594 CLTCQ00610 1675 aaKnown RBP30.08■■■□□ 2.41
PDE4C-205ENST00000593594 ZNF644Q9H582 1327 aaPredicted RBP30.06■■■□□ 2.4
PDE4C-205ENST00000593594 GGT6Q6P531 493 aa30.06■■■□□ 2.4
PDE4C-205ENST00000593594 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
PDE4C-205ENST00000593594 PTPRKQ15262 1439 aa30.02■■■□□ 2.4
PDE4C-205ENST00000593594 EHBP1L1Q8N3D4 1523 aa30.01■■■□□ 2.4
PDE4C-205ENST00000593594 NCKAP5LQ9HCH0 1330 aa30.01■■■□□ 2.4
PDE4C-205ENST00000593594 MBD5Q9P267 1494 aa30.01■■■□□ 2.4
PDE4C-205ENST00000593594 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
PDE4C-205ENST00000593594 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
PDE4C-205ENST00000593594 PPP6R1Q9UPN7 881 aa30■■■□□ 2.39
PDE4C-205ENST00000593594 MYO3AQ8NEV4 1616 aa29.99■■■□□ 2.39
PDE4C-205ENST00000593594 ZNF142P52746 1687 aaPredicted RBP29.98■■■□□ 2.39
PDE4C-205ENST00000593594 DISP3Q9P2K9 1392 aa29.98■■■□□ 2.39
PDE4C-205ENST00000593594 CEP162Q5TB80 1403 aa29.97■■■□□ 2.39
PDE4C-205ENST00000593594 RTEL1-TNFRSF6BF6WH68 1400 aa29.96■■■□□ 2.39
PDE4C-205ENST00000593594 CEP170BQ9Y4F5 1589 aaPredicted RBP29.95■■■□□ 2.39
PDE4C-205ENST00000593594 PLA2R1Q13018 1463 aa29.95■■■□□ 2.39
PDE4C-205ENST00000593594 PKD2Q13563 968 aa29.95■■■□□ 2.39
PDE4C-205ENST00000593594 DHX29Q7Z478 1369 aaKnown RBP29.92■■■□□ 2.38
PDE4C-205ENST00000593594 ZNF335Q9H4Z2 1342 aaPredicted RBP29.92■■■□□ 2.38
PDE4C-205ENST00000593594 TCOF1Q13428 1488 aaKnown RBP29.91■■■□□ 2.38
PDE4C-205ENST00000593594 ILDR2Q71H61 639 aa29.88■■■□□ 2.37
PDE4C-205ENST00000593594 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
PDE4C-205ENST00000593594 NCOA2Q15596 1464 aa29.85■■■□□ 2.37
PDE4C-205ENST00000593594 CCDC141Q6ZP82 1450 aa29.85■■■□□ 2.37
PDE4C-205ENST00000593594 KIF3BO15066 747 aa29.84■■■□□ 2.37
PDE4C-205ENST00000593594 CAMSAP2Q08AD1 1489 aa29.83■■■□□ 2.37
PDE4C-205ENST00000593594 RSPH4AQ5TD94 716 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms