RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ARHGAP35Q9NRY4 1499 aa18.69■□□□□ 0.58
PRKCSH-220ENST00000593104 KIF14Q15058 1648 aa18.68■□□□□ 0.58
PRKCSH-220ENST00000593104 FBXO41Q8TF61 875 aa18.68■□□□□ 0.58
PRKCSH-220ENST00000593104 PLCH2O75038 1416 aa18.67■□□□□ 0.58
PRKCSH-220ENST00000593104 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
PRKCSH-220ENST00000593104 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
PRKCSH-220ENST00000593104 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
PRKCSH-220ENST00000593104 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
PRKCSH-220ENST00000593104 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
PRKCSH-220ENST00000593104 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
PRKCSH-220ENST00000593104 CEBPAP49715 358 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-220ENST00000593104 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
PRKCSH-220ENST00000593104 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
PRKCSH-220ENST00000593104 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
PRKCSH-220ENST00000593104 ATP10AO60312 1499 aa18.58■□□□□ 0.56
PRKCSH-220ENST00000593104 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
PRKCSH-220ENST00000593104 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-220ENST00000593104 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
PRKCSH-220ENST00000593104 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
PRKCSH-220ENST00000593104 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
PRKCSH-220ENST00000593104 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
PRKCSH-220ENST00000593104 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-220ENST00000593104 KDM5CP41229 1560 aa18.51■□□□□ 0.55
PRKCSH-220ENST00000593104 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
PRKCSH-220ENST00000593104 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
PRKCSH-220ENST00000593104 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
PRKCSH-220ENST00000593104 CLIP1P30622 1438 aa18.49■□□□□ 0.55
PRKCSH-220ENST00000593104 TRAPPC8Q9Y2L5 1435 aa18.49■□□□□ 0.55
PRKCSH-220ENST00000593104 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
PRKCSH-220ENST00000593104 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
PRKCSH-220ENST00000593104 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
PRKCSH-220ENST00000593104 ABCC1P33527 1531 aa18.45■□□□□ 0.54
PRKCSH-220ENST00000593104 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
PRKCSH-220ENST00000593104 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
PRKCSH-220ENST00000593104 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
PRKCSH-220ENST00000593104 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
PRKCSH-220ENST00000593104 C3P01024 1663 aa18.42■□□□□ 0.54
PRKCSH-220ENST00000593104 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
PRKCSH-220ENST00000593104 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
PRKCSH-220ENST00000593104 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-220ENST00000593104 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
PRKCSH-220ENST00000593104 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
PRKCSH-220ENST00000593104 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
PRKCSH-220ENST00000593104 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
PRKCSH-220ENST00000593104 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
PRKCSH-220ENST00000593104 AGLP35573 1532 aa18.34■□□□□ 0.53
PRKCSH-220ENST00000593104 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.53
PRKCSH-220ENST00000593104 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRKCSH-220ENST00000593104 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
PRKCSH-220ENST00000593104 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-220ENST00000593104 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-220ENST00000593104 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-220ENST00000593104 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-220ENST00000593104 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-220ENST00000593104 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
PRKCSH-220ENST00000593104 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
PRKCSH-220ENST00000593104 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-220ENST00000593104 PTPRTO14522 1441 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 INO80Q9ULG1 1556 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
PRKCSH-220ENST00000593104 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
PRKCSH-220ENST00000593104 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
PRKCSH-220ENST00000593104 ILDR2Q71H61 639 aa18.21■□□□□ 0.51
PRKCSH-220ENST00000593104 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
PRKCSH-220ENST00000593104 PLXNC1O60486 1568 aa18.21■□□□□ 0.51
PRKCSH-220ENST00000593104 A2MP01023 1474 aa18.2■□□□□ 0.5
PRKCSH-220ENST00000593104 GGT6Q6P531 493 aa18.2■□□□□ 0.5
PRKCSH-220ENST00000593104 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
PRKCSH-220ENST00000593104 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
PRKCSH-220ENST00000593104 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
PRKCSH-220ENST00000593104 MYO3AQ8NEV4 1616 aa18.18■□□□□ 0.5
PRKCSH-220ENST00000593104 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
PRKCSH-220ENST00000593104 NPATQ14207 1427 aa18.16■□□□□ 0.5
PRKCSH-220ENST00000593104 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-220ENST00000593104 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
PRKCSH-220ENST00000593104 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
PRKCSH-220ENST00000593104 MBD5Q9P267 1494 aa18.13■□□□□ 0.49
PRKCSH-220ENST00000593104 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-220ENST00000593104 ZNF142P52746 1687 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-220ENST00000593104 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
PRKCSH-220ENST00000593104 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
PRKCSH-220ENST00000593104 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.49
PRKCSH-220ENST00000593104 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
PRKCSH-220ENST00000593104 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-220ENST00000593104 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-220ENST00000593104 PLA2R1Q13018 1463 aa18.05■□□□□ 0.48
PRKCSH-220ENST00000593104 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
PRKCSH-220ENST00000593104 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
PRKCSH-220ENST00000593104 KIF3BO15066 747 aa18.04■□□□□ 0.48
PRKCSH-220ENST00000593104 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-220ENST00000593104 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
PRKCSH-220ENST00000593104 UBAP1LF5GYI3 381 aa18.03■□□□□ 0.48
PRKCSH-220ENST00000593104 DHX29Q7Z478 1369 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-220ENST00000593104 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
PRKCSH-220ENST00000593104 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms