RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 ADGBQ8N7X0 1667 aa22.76■■□□□ 1.23
CNN1-210ENST00000592923 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
CNN1-210ENST00000592923 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
CNN1-210ENST00000592923 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
CNN1-210ENST00000592923 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
CNN1-210ENST00000592923 PLEKHD1A6NEE1 506 aa22.71■■□□□ 1.23
CNN1-210ENST00000592923 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
CNN1-210ENST00000592923 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.22
CNN1-210ENST00000592923 ADGRL2O95490 1459 aa22.69■■□□□ 1.22
CNN1-210ENST00000592923 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
CNN1-210ENST00000592923 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
CNN1-210ENST00000592923 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
CNN1-210ENST00000592923 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
CNN1-210ENST00000592923 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
CNN1-210ENST00000592923 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
CNN1-210ENST00000592923 PREX2Q70Z35 1606 aa22.64■■□□□ 1.21
CNN1-210ENST00000592923 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
CNN1-210ENST00000592923 ARHGEF5Q12774 1597 aa22.6■■□□□ 1.21
CNN1-210ENST00000592923 NCOA1Q15788 1441 aa22.6■■□□□ 1.21
CNN1-210ENST00000592923 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
CNN1-210ENST00000592923 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.2
CNN1-210ENST00000592923 UHRF1BP1LA0JNW5 1464 aa22.57■■□□□ 1.2
CNN1-210ENST00000592923 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
CNN1-210ENST00000592923 CDC42BPBQ9Y5S2 1711 aa22.57■■□□□ 1.2
CNN1-210ENST00000592923 MIER1Q8N108 512 aa22.55■■□□□ 1.2
CNN1-210ENST00000592923 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
CNN1-210ENST00000592923 TTC37Q6PGP7 1564 aa22.54■■□□□ 1.2
CNN1-210ENST00000592923 MPHOSPH9Q99550 1183 aa22.54■■□□□ 1.2
CNN1-210ENST00000592923 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
CNN1-210ENST00000592923 SAMD9LQ8IVG5 1584 aa22.54■■□□□ 1.2
CNN1-210ENST00000592923 C9orf84Q5VXU9 1444 aa22.53■■□□□ 1.2
CNN1-210ENST00000592923 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
CNN1-210ENST00000592923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.51■■□□□ 1.19
CNN1-210ENST00000592923 MYO5CQ9NQX4 1742 aa22.5■■□□□ 1.19
CNN1-210ENST00000592923 PZPP20742 1482 aa22.5■■□□□ 1.19
CNN1-210ENST00000592923 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
CNN1-210ENST00000592923 CCDC141Q6ZP82 1450 aa22.48■■□□□ 1.19
CNN1-210ENST00000592923 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
CNN1-210ENST00000592923 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
CNN1-210ENST00000592923 ANKRD50Q9ULJ7 1429 aa22.45■■□□□ 1.18
CNN1-210ENST00000592923 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
CNN1-210ENST00000592923 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
CNN1-210ENST00000592923 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
CNN1-210ENST00000592923 KDM5DQ9BY66 1539 aa22.44■■□□□ 1.18
CNN1-210ENST00000592923 SYCP2Q9BX26 1530 aa22.42■■□□□ 1.18
CNN1-210ENST00000592923 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
CNN1-210ENST00000592923 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.18
CNN1-210ENST00000592923 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
CNN1-210ENST00000592923 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
CNN1-210ENST00000592923 KIAA1107Q9UPP5 1409 aa22.38■■□□□ 1.17
CNN1-210ENST00000592923 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
CNN1-210ENST00000592923 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
CNN1-210ENST00000592923 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
CNN1-210ENST00000592923 PLXNC1O60486 1568 aa22.36■■□□□ 1.17
CNN1-210ENST00000592923 HNRNPMP52272 730 aaKnown RBP eCLIP22.35■■□□□ 1.17
CNN1-210ENST00000592923 FOXD1Q16676 465 aa22.34■■□□□ 1.17
CNN1-210ENST00000592923 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
CNN1-210ENST00000592923 PLCH2O75038 1416 aa22.33■■□□□ 1.16
CNN1-210ENST00000592923 ABCC1P33527 1531 aa22.31■■□□□ 1.16
CNN1-210ENST00000592923 UNC13BO14795 1591 aa22.28■■□□□ 1.16
CNN1-210ENST00000592923 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
CNN1-210ENST00000592923 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
CNN1-210ENST00000592923 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
CNN1-210ENST00000592923 NUP155O75694 1391 aa22.27■■□□□ 1.15
CNN1-210ENST00000592923 ARHGEF12Q9NZN5 1544 aa22.25■■□□□ 1.15
CNN1-210ENST00000592923 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
CNN1-210ENST00000592923 PKD2Q13563 968 aa22.24■■□□□ 1.15
CNN1-210ENST00000592923 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
CNN1-210ENST00000592923 FAM135AQ9P2D6 1515 aa22.23■■□□□ 1.15
CNN1-210ENST00000592923 DUOX2Q9NRD8 1548 aa22.22■■□□□ 1.15
CNN1-210ENST00000592923 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
CNN1-210ENST00000592923 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
CNN1-210ENST00000592923 DDX10Q13206 875 aaKnown RBP22.2■■□□□ 1.14
CNN1-210ENST00000592923 HIRIP3Q9BW71 556 aaPredicted RBP22.19■■□□□ 1.14
CNN1-210ENST00000592923 ERBINQ96RT1 1412 aa22.18■■□□□ 1.14
CNN1-210ENST00000592923 IQGAP3Q86VI3 1631 aa22.18■■□□□ 1.14
CNN1-210ENST00000592923 MAGI2Q86UL8 1455 aa22.18■■□□□ 1.14
CNN1-210ENST00000592923 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.13
CNN1-210ENST00000592923 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.13
CNN1-210ENST00000592923 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
CNN1-210ENST00000592923 ZFYVE16Q7Z3T8 1539 aa22.14■■□□□ 1.13
CNN1-210ENST00000592923 TRAPPC8Q9Y2L5 1435 aa22.13■■□□□ 1.13
CNN1-210ENST00000592923 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
CNN1-210ENST00000592923 RTEL1-TNFRSF6BF6WH68 1400 aa22.12■■□□□ 1.13
CNN1-210ENST00000592923 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
CNN1-210ENST00000592923 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
CNN1-210ENST00000592923 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
CNN1-210ENST00000592923 FANCAO15360 1455 aa22.09■■□□□ 1.13
CNN1-210ENST00000592923 INO80Q9ULG1 1556 aaPredicted RBP22.09■■□□□ 1.13
CNN1-210ENST00000592923 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.12
CNN1-210ENST00000592923 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
CNN1-210ENST00000592923 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
CNN1-210ENST00000592923 ATP7AQ04656 1500 aa22.03■■□□□ 1.12
CNN1-210ENST00000592923 ANP32CO43423 234 aa22.03■■□□□ 1.12
CNN1-210ENST00000592923 DEPDC5O75140 1603 aa22.02■■□□□ 1.12
CNN1-210ENST00000592923 SPAG9O60271 1321 aaKnown RBP22.02■■□□□ 1.12
CNN1-210ENST00000592923 CCER2I3L3R5 266 aa22.02■■□□□ 1.12
CNN1-210ENST00000592923 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
CNN1-210ENST00000592923 ATP10AO60312 1499 aa22.02■■□□□ 1.12
CNN1-210ENST00000592923 ADGRL1O94910 1474 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms