RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 DNMT1P26358 1616 aaKnown RBP15.04■□□□□ -0
VPS25-206ENST00000591584 ABCC10Q5T3U5 1492 aa15.04■□□□□ -0
VPS25-206ENST00000591584 ABCC2Q92887 1545 aa15.02■□□□□ -0
VPS25-206ENST00000591584 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
VPS25-206ENST00000591584 GCC2Q8IWJ2 1684 aa15.01□□□□□ -0.01
VPS25-206ENST00000591584 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
VPS25-206ENST00000591584 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
VPS25-206ENST00000591584 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
VPS25-206ENST00000591584 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
VPS25-206ENST00000591584 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
VPS25-206ENST00000591584 SHANK2Q9UPX8 1470 aa14.97□□□□□ -0.01
VPS25-206ENST00000591584 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
VPS25-206ENST00000591584 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
VPS25-206ENST00000591584 NCOA1Q15788 1441 aa14.96□□□□□ -0.01
VPS25-206ENST00000591584 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
VPS25-206ENST00000591584 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
VPS25-206ENST00000591584 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.02
VPS25-206ENST00000591584 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
VPS25-206ENST00000591584 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
VPS25-206ENST00000591584 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
VPS25-206ENST00000591584 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
VPS25-206ENST00000591584 MPHOSPH9Q99550 1183 aa14.94□□□□□ -0.02
VPS25-206ENST00000591584 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
VPS25-206ENST00000591584 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
VPS25-206ENST00000591584 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
VPS25-206ENST00000591584 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
VPS25-206ENST00000591584 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
VPS25-206ENST00000591584 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
VPS25-206ENST00000591584 ADGBQ8N7X0 1667 aa14.89□□□□□ -0.03
VPS25-206ENST00000591584 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
VPS25-206ENST00000591584 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
VPS25-206ENST00000591584 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
VPS25-206ENST00000591584 PLCH2O75038 1416 aa14.87□□□□□ -0.03
VPS25-206ENST00000591584 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
VPS25-206ENST00000591584 CCDC141Q6ZP82 1450 aa14.87□□□□□ -0.03
VPS25-206ENST00000591584 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
VPS25-206ENST00000591584 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
VPS25-206ENST00000591584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS25-206ENST00000591584 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
VPS25-206ENST00000591584 ARAP3Q8WWN8 1544 aa14.85□□□□□ -0.03
VPS25-206ENST00000591584 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS25-206ENST00000591584 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
VPS25-206ENST00000591584 ARHGAP5Q13017 1502 aa14.83□□□□□ -0.04
VPS25-206ENST00000591584 ANKRD30BQ9BXX2 1392 aa14.83□□□□□ -0.04
VPS25-206ENST00000591584 KDM6BO15054 1643 aa14.82□□□□□ -0.04
VPS25-206ENST00000591584 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
VPS25-206ENST00000591584 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
VPS25-206ENST00000591584 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
VPS25-206ENST00000591584 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
VPS25-206ENST00000591584 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS25-206ENST00000591584 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
VPS25-206ENST00000591584 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
VPS25-206ENST00000591584 KIF15Q9NS87 1388 aa14.79□□□□□ -0.04
VPS25-206ENST00000591584 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
VPS25-206ENST00000591584 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
VPS25-206ENST00000591584 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
VPS25-206ENST00000591584 PZPP20742 1482 aa14.77□□□□□ -0.04
VPS25-206ENST00000591584 RPRD2Q5VT52 1461 aaKnown RBP14.77□□□□□ -0.04
VPS25-206ENST00000591584 NUP155O75694 1391 aa14.76□□□□□ -0.05
VPS25-206ENST00000591584 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
VPS25-206ENST00000591584 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
VPS25-206ENST00000591584 CENPBP07199 599 aaPredicted RBP14.73□□□□□ -0.05
VPS25-206ENST00000591584 PKD2Q13563 968 aa14.73□□□□□ -0.05
VPS25-206ENST00000591584 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
VPS25-206ENST00000591584 PLXNC1O60486 1568 aa14.72□□□□□ -0.05
VPS25-206ENST00000591584 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.05
VPS25-206ENST00000591584 MIER1Q8N108 512 aa14.71□□□□□ -0.05
VPS25-206ENST00000591584 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
VPS25-206ENST00000591584 ASXL2Q76L83 1435 aa14.7□□□□□ -0.06
VPS25-206ENST00000591584 ABCC1P33527 1531 aa14.7□□□□□ -0.06
VPS25-206ENST00000591584 ABCA9Q8IUA7 1624 aa14.7□□□□□ -0.06
VPS25-206ENST00000591584 FOXD1Q16676 465 aa14.68□□□□□ -0.06
VPS25-206ENST00000591584 ARHGEF12Q9NZN5 1544 aa14.67□□□□□ -0.06
VPS25-206ENST00000591584 EIF4G2P78344 907 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS25-206ENST00000591584 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
VPS25-206ENST00000591584 FANCAO15360 1455 aa14.65□□□□□ -0.06
VPS25-206ENST00000591584 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
VPS25-206ENST00000591584 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
VPS25-206ENST00000591584 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
VPS25-206ENST00000591584 UNC13BO14795 1591 aa14.64□□□□□ -0.07
VPS25-206ENST00000591584 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
VPS25-206ENST00000591584 MAGI2Q86UL8 1455 aa14.61□□□□□ -0.07
VPS25-206ENST00000591584 UHRF1BP1Q6BDS2 1440 aa14.6□□□□□ -0.07
VPS25-206ENST00000591584 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
VPS25-206ENST00000591584 ATP10AO60312 1499 aa14.59□□□□□ -0.07
VPS25-206ENST00000591584 ADGRL1O94910 1474 aa14.59□□□□□ -0.07
VPS25-206ENST00000591584 AFAP1Q8N556 730 aa14.59□□□□□ -0.07
VPS25-206ENST00000591584 CD109Q6YHK3 1445 aa14.58□□□□□ -0.07
VPS25-206ENST00000591584 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
VPS25-206ENST00000591584 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
VPS25-206ENST00000591584 STAC3Q96MF2 364 aa14.58□□□□□ -0.08
VPS25-206ENST00000591584 CFAP74Q9C0B2 1584 aa14.58□□□□□ -0.08
VPS25-206ENST00000591584 IQGAP3Q86VI3 1631 aa14.58□□□□□ -0.08
VPS25-206ENST00000591584 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
VPS25-206ENST00000591584 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
VPS25-206ENST00000591584 CCDC144AA2RUR9 1427 aa14.57□□□□□ -0.08
VPS25-206ENST00000591584 KANK1Q14678 1352 aa14.56□□□□□ -0.08
VPS25-206ENST00000591584 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
VPS25-206ENST00000591584 CCER2I3L3R5 266 aa14.55□□□□□ -0.08
VPS25-206ENST00000591584 ANP32CO43423 234 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms