RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
NCLN-205ENST00000590671 KDM6BO15054 1643 aa29.52■■■□□ 2.32
NCLN-205ENST00000590671 GCC2Q8IWJ2 1684 aa29.49■■■□□ 2.31
NCLN-205ENST00000590671 UHRF1BP1LA0JNW5 1464 aa29.48■■■□□ 2.31
NCLN-205ENST00000590671 ZCCHC11Q5TAX3 1644 aaKnown RBP29.48■■■□□ 2.31
NCLN-205ENST00000590671 AKNAQ7Z591 1439 aa29.47■■■□□ 2.31
NCLN-205ENST00000590671 SIN3AQ96ST3 1273 aa29.46■■■□□ 2.31
NCLN-205ENST00000590671 KDM5BQ9UGL1 1544 aa29.44■■■□□ 2.3
NCLN-205ENST00000590671 KCNH8Q96L42 1107 aa29.43■■■□□ 2.3
NCLN-205ENST00000590671 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
NCLN-205ENST00000590671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.41■■■□□ 2.32e-6■□□□□ 8.3
NCLN-205ENST00000590671 ROCK1Q13464 1354 aa29.41■■■□□ 2.3
NCLN-205ENST00000590671 CDC42BPBQ9Y5S2 1711 aa29.39■■■□□ 2.3
NCLN-205ENST00000590671 NEUROD1Q13562 356 aa29.37■■■□□ 2.29
NCLN-205ENST00000590671 PREX2Q70Z35 1606 aa29.36■■■□□ 2.29
NCLN-205ENST00000590671 CROCC2H7BZ55 1655 aa29.34■■■□□ 2.29
NCLN-205ENST00000590671 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.297e-10■■■□□ 18.3
NCLN-205ENST00000590671 TRIM52Q96A61 297 aa29.33■■■□□ 2.29
NCLN-205ENST00000590671 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
NCLN-205ENST00000590671 NCOA1Q15788 1441 aa29.32■■■□□ 2.28
NCLN-205ENST00000590671 ZNF316A6NFI3 1004 aaPredicted RBP29.31■■■□□ 2.28
NCLN-205ENST00000590671 DENND4BO75064 1496 aaPredicted RBP29.3■■■□□ 2.28
NCLN-205ENST00000590671 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
NCLN-205ENST00000590671 ADGBQ8N7X0 1667 aa29.28■■■□□ 2.28
NCLN-205ENST00000590671 ARHGAP5Q13017 1502 aa29.27■■■□□ 2.28
NCLN-205ENST00000590671 ADGRL2O95490 1459 aa29.27■■■□□ 2.28
NCLN-205ENST00000590671 MYO5CQ9NQX4 1742 aa29.24■■■□□ 2.27
NCLN-205ENST00000590671 C9orf84Q5VXU9 1444 aa29.24■■■□□ 2.27
NCLN-205ENST00000590671 MPHOSPH9Q99550 1183 aa29.21■■■□□ 2.27
NCLN-205ENST00000590671 ARHGEF5Q12774 1597 aa29.21■■■□□ 2.27
NCLN-205ENST00000590671 ANKRD30AQ9BXX3 1397 aa29.21■■■□□ 2.27
NCLN-205ENST00000590671 SHANK2Q9UPX8 1470 aa29.2■■■□□ 2.27
NCLN-205ENST00000590671 SYCP2Q9BX26 1530 aa29.2■■■□□ 2.27
NCLN-205ENST00000590671 FOXD1Q16676 465 aa29.18■■■□□ 2.26
NCLN-205ENST00000590671 WDR7Q9Y4E6 1490 aa29.18■■■□□ 2.26
NCLN-205ENST00000590671 TSPY4P0CV99 314 aa29.17■■■□□ 2.26
NCLN-205ENST00000590671 TSPY10P0CW01 314 aa29.17■■■□□ 2.26
NCLN-205ENST00000590671 PLCH2O75038 1416 aa29.17■■■□□ 2.26
NCLN-205ENST00000590671 DIEXFQ68CQ4 756 aaKnown RBP29.16■■■□□ 2.26
NCLN-205ENST00000590671 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
NCLN-205ENST00000590671 ARHGEF12Q9NZN5 1544 aa29.14■■■□□ 2.26
NCLN-205ENST00000590671 ANKRD50Q9ULJ7 1429 aa29.12■■■□□ 2.25
NCLN-205ENST00000590671 ASXL2Q76L83 1435 aa29.12■■■□□ 2.25
NCLN-205ENST00000590671 KIF15Q9NS87 1388 aa29.08■■■□□ 2.25
NCLN-205ENST00000590671 PZPP20742 1482 aa29.07■■■□□ 2.24
NCLN-205ENST00000590671 EFCAB2Q5VUJ9 269 aa29.07■■■□□ 2.24
NCLN-205ENST00000590671 KIAA1107Q9UPP5 1409 aa29.07■■■□□ 2.24
NCLN-205ENST00000590671 SLC4A1APQ9BWU0 796 aaKnown RBP29.06■■■□□ 2.24
NCLN-205ENST00000590671 TIMELESSQ9UNS1 1208 aa29.06■■■□□ 2.24
NCLN-205ENST00000590671 RSPH4AQ5TD94 716 aa29.06■■■□□ 2.24
NCLN-205ENST00000590671 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
NCLN-205ENST00000590671 PPP1R15AO75807 674 aaPredicted RBP29.04■■■□□ 2.24
NCLN-205ENST00000590671 PLEKHH2Q8IVE3 1493 aa29.03■■■□□ 2.24
NCLN-205ENST00000590671 ABCC1P33527 1531 aa29.01■■■□□ 2.23
NCLN-205ENST00000590671 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
NCLN-205ENST00000590671 ABCA9Q8IUA7 1624 aa29■■■□□ 2.23
NCLN-205ENST00000590671 TRAPPC8Q9Y2L5 1435 aa29■■■□□ 2.23
NCLN-205ENST00000590671 ANKRD30BQ9BXX2 1392 aa28.98■■■□□ 2.23
NCLN-205ENST00000590671 MAST1Q9Y2H9 1570 aa28.98■■■□□ 2.23
NCLN-205ENST00000590671 ACIN1Q9UKV3 1341 aaKnown RBP28.98■■■□□ 2.23
NCLN-205ENST00000590671 ARAP3Q8WWN8 1544 aa28.95■■■□□ 2.23
NCLN-205ENST00000590671 NUP155O75694 1391 aa28.94■■■□□ 2.22
NCLN-205ENST00000590671 FANCAO15360 1455 aa28.93■■■□□ 2.22
NCLN-205ENST00000590671 AFAP1Q8N556 730 aa28.92■■■□□ 2.22
NCLN-205ENST00000590671 PKD2Q13563 968 aa28.91■■■□□ 2.22
NCLN-205ENST00000590671 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
NCLN-205ENST00000590671 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
NCLN-205ENST00000590671 RIMBP3CA6NJZ7 1639 aa28.86■■■□□ 2.21
NCLN-205ENST00000590671 RIMBP3BA6NNM3 1639 aa28.86■■■□□ 2.21
NCLN-205ENST00000590671 RIMBP3Q9UFD9 1639 aa28.86■■■□□ 2.21
NCLN-205ENST00000590671 RPRD2Q5VT52 1461 aaKnown RBP28.85■■■□□ 2.21
NCLN-205ENST00000590671 KDM5DQ9BY66 1539 aa28.85■■■□□ 2.21
NCLN-205ENST00000590671 L3MBTL2Q969R5 705 aa28.84■■■□□ 2.21
NCLN-205ENST00000590671 ADGRL1O94910 1474 aa28.81■■■□□ 2.2
NCLN-205ENST00000590671 SPAG9O60271 1321 aaKnown RBP28.81■■■□□ 2.2
NCLN-205ENST00000590671 HIRIP3Q9BW71 556 aaPredicted RBP28.8■■■□□ 2.2
NCLN-205ENST00000590671 SCAPERQ9BY12 1400 aa28.8■■■□□ 2.2
NCLN-205ENST00000590671 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
NCLN-205ENST00000590671 ZFYVE16Q7Z3T8 1539 aa28.78■■■□□ 2.2
NCLN-205ENST00000590671 CD109Q6YHK3 1445 aa28.78■■■□□ 2.2
NCLN-205ENST00000590671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.23e-6■□□□□ 11.3
NCLN-205ENST00000590671 FAM135AQ9P2D6 1515 aa28.77■■■□□ 2.2
NCLN-205ENST00000590671 TEX14Q8IWB6 1497 aa28.76■■■□□ 2.19
NCLN-205ENST00000590671 UNC13BO14795 1591 aa28.75■■■□□ 2.19
NCLN-205ENST00000590671 MIER1Q8N108 512 aa28.73■■■□□ 2.19
NCLN-205ENST00000590671 RTEL1-TNFRSF6BF6WH68 1400 aa28.73■■■□□ 2.19
NCLN-205ENST00000590671 ERBINQ96RT1 1412 aa28.72■■■□□ 2.19
NCLN-205ENST00000590671 INO80Q9ULG1 1556 aaPredicted RBP28.69■■■□□ 2.18
NCLN-205ENST00000590671 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
NCLN-205ENST00000590671 NBPF8Q3BBV2 869 aa28.66■■■□□ 2.18
NCLN-205ENST00000590671 MYT1LQ9UL68 1186 aa28.65■■■□□ 2.18
NCLN-205ENST00000590671 MAGI2Q86UL8 1455 aa28.64■■■□□ 2.18
NCLN-205ENST00000590671 IQGAP3Q86VI3 1631 aa28.64■■■□□ 2.17
NCLN-205ENST00000590671 KIDINS220Q9ULH0 1771 aa28.58■■■□□ 2.17
NCLN-205ENST00000590671 ZNF518AQ6AHZ1 1483 aa28.58■■■□□ 2.17
NCLN-205ENST00000590671 PLA2R1Q13018 1463 aa28.58■■■□□ 2.16
NCLN-205ENST00000590671 CFAP74Q9C0B2 1584 aa28.57■■■□□ 2.16
NCLN-205ENST00000590671 POGZQ7Z3K3 1410 aa28.57■■■□□ 2.16
NCLN-205ENST00000590671 MAP3K4Q9Y6R4 1608 aa28.54■■■□□ 2.16
NCLN-205ENST00000590671 RAPGEF3O95398 923 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms