RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 FANCAO15360 1455 aa17.82■□□□□ 0.44
TUBD1-210ENST00000590498 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
TUBD1-210ENST00000590498 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
TUBD1-210ENST00000590498 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
TUBD1-210ENST00000590498 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
TUBD1-210ENST00000590498 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
TUBD1-210ENST00000590498 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
TUBD1-210ENST00000590498 YEATS2Q9ULM3 1422 aa17.79■□□□□ 0.44
TUBD1-210ENST00000590498 FBXO41Q8TF61 875 aa17.77■□□□□ 0.44
TUBD1-210ENST00000590498 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
TUBD1-210ENST00000590498 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
TUBD1-210ENST00000590498 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
TUBD1-210ENST00000590498 RIMS1Q86UR5 1692 aaKnown RBP17.75■□□□□ 0.43
TUBD1-210ENST00000590498 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
TUBD1-210ENST00000590498 PLCH2O75038 1416 aa17.74■□□□□ 0.43
TUBD1-210ENST00000590498 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
TUBD1-210ENST00000590498 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
TUBD1-210ENST00000590498 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
TUBD1-210ENST00000590498 ZFYVE16Q7Z3T8 1539 aa17.72■□□□□ 0.43
TUBD1-210ENST00000590498 HSPA2P54652 639 aa17.72■□□□□ 0.43
TUBD1-210ENST00000590498 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
TUBD1-210ENST00000590498 ARHGAP35Q9NRY4 1499 aa17.7■□□□□ 0.42
TUBD1-210ENST00000590498 MLECQ14165 292 aa17.7■□□□□ 0.42
TUBD1-210ENST00000590498 POGZQ7Z3K3 1410 aa17.7■□□□□ 0.42
TUBD1-210ENST00000590498 UBTFP17480 764 aaKnown RBP17.69■□□□□ 0.42
TUBD1-210ENST00000590498 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
TUBD1-210ENST00000590498 KIF14Q15058 1648 aa17.65■□□□□ 0.42
TUBD1-210ENST00000590498 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
TUBD1-210ENST00000590498 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
TUBD1-210ENST00000590498 ATP10AO60312 1499 aa17.64■□□□□ 0.41
TUBD1-210ENST00000590498 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
TUBD1-210ENST00000590498 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
TUBD1-210ENST00000590498 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
TUBD1-210ENST00000590498 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
TUBD1-210ENST00000590498 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
TUBD1-210ENST00000590498 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
TUBD1-210ENST00000590498 FER1L4A9Z1Z3 1794 aa17.59■□□□□ 0.41
TUBD1-210ENST00000590498 MYO5CQ9NQX4 1742 aa17.59■□□□□ 0.41
TUBD1-210ENST00000590498 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
TUBD1-210ENST00000590498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.4
TUBD1-210ENST00000590498 KDM5CP41229 1560 aa17.56■□□□□ 0.4
TUBD1-210ENST00000590498 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
TUBD1-210ENST00000590498 ZNF518AQ6AHZ1 1483 aa17.55■□□□□ 0.4
TUBD1-210ENST00000590498 CERKQ8TCT0 537 aa17.54■□□□□ 0.4
TUBD1-210ENST00000590498 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
TUBD1-210ENST00000590498 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
TUBD1-210ENST00000590498 TRAPPC8Q9Y2L5 1435 aa17.52■□□□□ 0.4
TUBD1-210ENST00000590498 CLIP1P30622 1438 aa17.5■□□□□ 0.39
TUBD1-210ENST00000590498 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
TUBD1-210ENST00000590498 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
TUBD1-210ENST00000590498 ABCA6Q8N139 1617 aa17.49■□□□□ 0.39
TUBD1-210ENST00000590498 PREX1Q8TCU6 1659 aa17.48■□□□□ 0.39
TUBD1-210ENST00000590498 REREQ9P2R6 1566 aa17.48■□□□□ 0.39
TUBD1-210ENST00000590498 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
TUBD1-210ENST00000590498 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
TUBD1-210ENST00000590498 ABCC1P33527 1531 aa17.47■□□□□ 0.39
TUBD1-210ENST00000590498 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
TUBD1-210ENST00000590498 PREX2Q70Z35 1606 aa17.46■□□□□ 0.39
TUBD1-210ENST00000590498 AGLP35573 1532 aa17.43■□□□□ 0.38
TUBD1-210ENST00000590498 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
TUBD1-210ENST00000590498 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
TUBD1-210ENST00000590498 UHRF1BP1Q6BDS2 1440 aa17.42■□□□□ 0.38
TUBD1-210ENST00000590498 KIDINS220Q9ULH0 1771 aa17.42■□□□□ 0.38
TUBD1-210ENST00000590498 C3P01024 1663 aa17.42■□□□□ 0.38
TUBD1-210ENST00000590498 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
TUBD1-210ENST00000590498 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
TUBD1-210ENST00000590498 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.37
TUBD1-210ENST00000590498 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
TUBD1-210ENST00000590498 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
TUBD1-210ENST00000590498 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
TUBD1-210ENST00000590498 PTPRTO14522 1441 aa17.35■□□□□ 0.37
TUBD1-210ENST00000590498 SYCP2Q9BX26 1530 aa17.34■□□□□ 0.37
TUBD1-210ENST00000590498 SETD1BQ9UPS6 1966 aaKnown RBP17.34■□□□□ 0.37
TUBD1-210ENST00000590498 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
TUBD1-210ENST00000590498 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
TUBD1-210ENST00000590498 ZMYM3Q14202 1370 aa17.31■□□□□ 0.36
TUBD1-210ENST00000590498 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
TUBD1-210ENST00000590498 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
TUBD1-210ENST00000590498 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
TUBD1-210ENST00000590498 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
TUBD1-210ENST00000590498 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
TUBD1-210ENST00000590498 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
TUBD1-210ENST00000590498 NPATQ14207 1427 aa17.28■□□□□ 0.36
TUBD1-210ENST00000590498 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
TUBD1-210ENST00000590498 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
TUBD1-210ENST00000590498 ILDR2Q71H61 639 aa17.27■□□□□ 0.36
TUBD1-210ENST00000590498 PLXNC1O60486 1568 aa17.27■□□□□ 0.35
TUBD1-210ENST00000590498 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
TUBD1-210ENST00000590498 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
TUBD1-210ENST00000590498 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
TUBD1-210ENST00000590498 CAMSAP1Q5T5Y3 1602 aa17.25■□□□□ 0.35
TUBD1-210ENST00000590498 A2MP01023 1474 aa17.25■□□□□ 0.35
TUBD1-210ENST00000590498 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
TUBD1-210ENST00000590498 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
TUBD1-210ENST00000590498 PLEKHH2Q8IVE3 1493 aa17.23■□□□□ 0.35
TUBD1-210ENST00000590498 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
TUBD1-210ENST00000590498 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
TUBD1-210ENST00000590498 GGT6Q6P531 493 aa17.22■□□□□ 0.35
TUBD1-210ENST00000590498 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
TUBD1-210ENST00000590498 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms