RNA–Protein interactions for RNA: ENST00000589506.1

RAD51D-217, Transcript of RAD51 paralog D, humanhuman

TSL 4

Gene RAD51D, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-217ENST00000589506 ATP1B4Q9UN42 357 aaPredicted RBP32.5■■■□□ 2.79
RAD51D-217ENST00000589506 FMN1Q68DA7 1419 aa32.5■■■□□ 2.79
RAD51D-217ENST00000589506 ARHGAP35Q9NRY4 1499 aa32.49■■■□□ 2.79
RAD51D-217ENST00000589506 EFCAB2Q5VUJ9 269 aa32.44■■■□□ 2.78
RAD51D-217ENST00000589506 MYO5CQ9NQX4 1742 aa32.43■■■□□ 2.78
RAD51D-217ENST00000589506 MLECQ14165 292 aa32.42■■■□□ 2.78
RAD51D-217ENST00000589506 PLPPR3Q6T4P5 718 aa32.42■■■□□ 2.78
RAD51D-217ENST00000589506 CDK11AQ9UQ88 783 aaPredicted RBP32.42■■■□□ 2.78
RAD51D-217ENST00000589506 HSPA2P54652 639 aa32.4■■■□□ 2.78
RAD51D-217ENST00000589506 CHIC1Q5VXU3 224 aa32.4■■■□□ 2.78
RAD51D-217ENST00000589506 KIF14Q15058 1648 aa32.39■■■□□ 2.78
RAD51D-217ENST00000589506 ATP10AO60312 1499 aa32.38■■■□□ 2.77
RAD51D-217ENST00000589506 FER1L4A9Z1Z3 1794 aa32.37■■■□□ 2.77
RAD51D-217ENST00000589506 TROQ12816 1431 aaPredicted RBP32.34■■■□□ 2.77
RAD51D-217ENST00000589506 LRRIQ1Q96JM4 1722 aa32.34■■■□□ 2.77
RAD51D-217ENST00000589506 C9orf84Q5VXU9 1444 aa32.31■■■□□ 2.76
RAD51D-217ENST00000589506 ARHGEF12Q9NZN5 1544 aa32.31■■■□□ 2.76
RAD51D-217ENST00000589506 AFAP1Q8N556 730 aa32.29■■■□□ 2.76
RAD51D-217ENST00000589506 ZNF518AQ6AHZ1 1483 aa32.27■■■□□ 2.76
RAD51D-217ENST00000589506 ARHGAP5Q13017 1502 aa32.26■■■□□ 2.76
RAD51D-217ENST00000589506 CLIP1P30622 1438 aa32.25■■■□□ 2.75
RAD51D-217ENST00000589506 KDM5CP41229 1560 aa32.24■■■□□ 2.75
RAD51D-217ENST00000589506 CDC42BPBQ9Y5S2 1711 aa32.24■■■□□ 2.75
RAD51D-217ENST00000589506 CEBPAP49715 358 aaPredicted RBP32.2■■■□□ 2.75
RAD51D-217ENST00000589506 PREX1Q8TCU6 1659 aa32.15■■■□□ 2.74
RAD51D-217ENST00000589506 DIP2CQ9Y2E4 1556 aa32.15■■■□□ 2.74
RAD51D-217ENST00000589506 SETD1BQ9UPS6 1966 aaKnown RBP32.14■■■□□ 2.74
RAD51D-217ENST00000589506 MYT1LQ9UL68 1186 aa32.14■■■□□ 2.74
RAD51D-217ENST00000589506 CASKIN1Q8WXD9 1431 aa32.14■■■□□ 2.74
RAD51D-217ENST00000589506 MLH3Q9UHC1 1453 aa32.12■■■□□ 2.73
RAD51D-217ENST00000589506 PREX2Q70Z35 1606 aa32.11■■■□□ 2.73
RAD51D-217ENST00000589506 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
RAD51D-217ENST00000589506 CERKQ8TCT0 537 aa32.1■■■□□ 2.73
RAD51D-217ENST00000589506 CCDC18Q5T9S5 1454 aa32.1■■■□□ 2.73
RAD51D-217ENST00000589506 TRAPPC8Q9Y2L5 1435 aa32.09■■■□□ 2.73
RAD51D-217ENST00000589506 ABCA6Q8N139 1617 aa32.09■■■□□ 2.73
RAD51D-217ENST00000589506 ABCC1P33527 1531 aa32.07■■■□□ 2.72
RAD51D-217ENST00000589506 CDC42BPAQ5VT25 1732 aa32.06■■■□□ 2.72
RAD51D-217ENST00000589506 ITSN2Q9NZM3 1697 aa32.05■■■□□ 2.72
RAD51D-217ENST00000589506 STRCQ7RTU9 1775 aa32.04■■■□□ 2.72
RAD51D-217ENST00000589506 AGLP35573 1532 aa32.02■■■□□ 2.72
RAD51D-217ENST00000589506 KIDINS220Q9ULH0 1771 aa32.01■■■□□ 2.71
RAD51D-217ENST00000589506 UHRF1BP1Q6BDS2 1440 aa32■■■□□ 2.71
RAD51D-217ENST00000589506 C3P01024 1663 aa31.99■■■□□ 2.71
RAD51D-217ENST00000589506 FYCO1Q9BQS8 1478 aa31.97■■■□□ 2.71
RAD51D-217ENST00000589506 DMRT2Q9Y5R5 561 aa31.96■■■□□ 2.71
RAD51D-217ENST00000589506 ESF1Q9H501 851 aaKnown RBP31.92■■■□□ 2.7
RAD51D-217ENST00000589506 SAMD9LQ8IVG5 1584 aa31.9■■■□□ 2.7
RAD51D-217ENST00000589506 ZNF777Q9ULD5 760 aaPredicted RBP31.9■■■□□ 2.7
RAD51D-217ENST00000589506 GPATCH8Q9UKJ3 1502 aaKnown RBP31.9■■■□□ 2.7
RAD51D-217ENST00000589506 HNRNPMP52272 730 aaKnown RBP eCLIP31.86■■■□□ 2.69
RAD51D-217ENST00000589506 CNTLNQ9NXG0 1405 aa31.84■■■□□ 2.69
RAD51D-217ENST00000589506 SYCP2Q9BX26 1530 aa31.83■■■□□ 2.69
RAD51D-217ENST00000589506 PTPRTO14522 1441 aa31.82■■■□□ 2.68
RAD51D-217ENST00000589506 SPAG9O60271 1321 aaKnown RBP31.81■■■□□ 2.68
RAD51D-217ENST00000589506 SUPT6HQ7KZ85 1726 aaKnown RBP31.78■■■□□ 2.68
RAD51D-217ENST00000589506 KIAA1107Q9UPP5 1409 aa31.78■■■□□ 2.68
RAD51D-217ENST00000589506 CFDP1Q9UEE9 299 aaPredicted RBP31.78■■■□□ 2.68
RAD51D-217ENST00000589506 MROH2AA6NES4 1674 aa31.76■■■□□ 2.68
RAD51D-217ENST00000589506 ZMYM3Q14202 1370 aa31.75■■■□□ 2.67
RAD51D-217ENST00000589506 ATP7AQ04656 1500 aa31.74■■■□□ 2.67
RAD51D-217ENST00000589506 PLEKHH2Q8IVE3 1493 aa31.73■■■□□ 2.67
RAD51D-217ENST00000589506 CCNB3Q8WWL7 1395 aa31.73■■■□□ 2.67
RAD51D-217ENST00000589506 NPATQ14207 1427 aa31.73■■■□□ 2.67
RAD51D-217ENST00000589506 NCOA1Q15788 1441 aa31.71■■■□□ 2.67
RAD51D-217ENST00000589506 INO80Q9ULG1 1556 aaPredicted RBP31.71■■■□□ 2.67
RAD51D-217ENST00000589506 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
RAD51D-217ENST00000589506 MTUS2Q5JR59 1369 aa31.68■■■□□ 2.66
RAD51D-217ENST00000589506 A2MP01023 1474 aa31.68■■■□□ 2.66
RAD51D-217ENST00000589506 LTBP4Q8N2S1 1624 aa31.67■■■□□ 2.66
RAD51D-217ENST00000589506 CLTCQ00610 1675 aaKnown RBP31.67■■■□□ 2.66
RAD51D-217ENST00000589506 CAMSAP1Q5T5Y3 1602 aa31.64■■■□□ 2.66
RAD51D-217ENST00000589506 ZNF644Q9H582 1327 aaPredicted RBP31.64■■■□□ 2.66
RAD51D-217ENST00000589506 GGT6Q6P531 493 aa31.61■■■□□ 2.65
RAD51D-217ENST00000589506 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
RAD51D-217ENST00000589506 MBD5Q9P267 1494 aa31.59■■■□□ 2.65
RAD51D-217ENST00000589506 PTPRKQ15262 1439 aa31.58■■■□□ 2.65
RAD51D-217ENST00000589506 ADGBQ8N7X0 1667 aa31.58■■■□□ 2.65
RAD51D-217ENST00000589506 NCKAP5LQ9HCH0 1330 aa31.57■■■□□ 2.64
RAD51D-217ENST00000589506 PPP6R1Q9UPN7 881 aa31.57■■■□□ 2.64
RAD51D-217ENST00000589506 IQSEC2Q5JU85 1478 aa31.54■■■□□ 2.64
RAD51D-217ENST00000589506 EHBP1L1Q8N3D4 1523 aa31.54■■■□□ 2.64
RAD51D-217ENST00000589506 ZNF142P52746 1687 aaPredicted RBP31.54■■■□□ 2.64
RAD51D-217ENST00000589506 MYO3AQ8NEV4 1616 aa31.53■■■□□ 2.64
RAD51D-217ENST00000589506 RTEL1-TNFRSF6BF6WH68 1400 aa31.51■■■□□ 2.64
RAD51D-217ENST00000589506 CEP162Q5TB80 1403 aa31.51■■■□□ 2.64
RAD51D-217ENST00000589506 CEP170BQ9Y4F5 1589 aaPredicted RBP31.49■■■□□ 2.63
RAD51D-217ENST00000589506 DISP3Q9P2K9 1392 aa31.49■■■□□ 2.63
RAD51D-217ENST00000589506 PLA2R1Q13018 1463 aa31.48■■■□□ 2.63
RAD51D-217ENST00000589506 PKD2Q13563 968 aa31.48■■■□□ 2.63
RAD51D-217ENST00000589506 DHX29Q7Z478 1369 aaKnown RBP31.47■■■□□ 2.63
RAD51D-217ENST00000589506 ZNF335Q9H4Z2 1342 aaPredicted RBP31.46■■■□□ 2.63
RAD51D-217ENST00000589506 TCOF1Q13428 1488 aaKnown RBP31.46■■■□□ 2.63
RAD51D-217ENST00000589506 ILDR2Q71H61 639 aa31.45■■■□□ 2.63
RAD51D-217ENST00000589506 KIF3BO15066 747 aa31.38■■■□□ 2.61
RAD51D-217ENST00000589506 A2ML1A8K2U0 1454 aa31.38■■■□□ 2.61
RAD51D-217ENST00000589506 NCOA2Q15596 1464 aa31.38■■■□□ 2.61
RAD51D-217ENST00000589506 RSPH4AQ5TD94 716 aa31.37■■■□□ 2.61
RAD51D-217ENST00000589506 DNMT1P26358 1616 aaKnown RBP31.37■■■□□ 2.61
RAD51D-217ENST00000589506 CCDC141Q6ZP82 1450 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms