RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
APOC1-204ENST00000589078 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
APOC1-204ENST00000589078 ATP1B4Q9UN42 357 aaPredicted RBP15.5■□□□□ 0.07
APOC1-204ENST00000589078 PREX1Q8TCU6 1659 aa15.49■□□□□ 0.07
APOC1-204ENST00000589078 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
APOC1-204ENST00000589078 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
APOC1-204ENST00000589078 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
APOC1-204ENST00000589078 PLEKHD1A6NEE1 506 aa15.46■□□□□ 0.07
APOC1-204ENST00000589078 MAGI2Q86UL8 1455 aa15.46■□□□□ 0.06
APOC1-204ENST00000589078 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
APOC1-204ENST00000589078 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
APOC1-204ENST00000589078 MLECQ14165 292 aa15.44■□□□□ 0.06
APOC1-204ENST00000589078 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
APOC1-204ENST00000589078 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
APOC1-204ENST00000589078 STRCQ7RTU9 1775 aa15.42■□□□□ 0.06
APOC1-204ENST00000589078 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
APOC1-204ENST00000589078 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
APOC1-204ENST00000589078 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
APOC1-204ENST00000589078 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
APOC1-204ENST00000589078 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 C9orf84Q5VXU9 1444 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 SOCS7O14512 581 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 ATP10AO60312 1499 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 CCDC18Q5T9S5 1454 aa15.38■□□□□ 0.05
APOC1-204ENST00000589078 PLCH2O75038 1416 aa15.35■□□□□ 0.05
APOC1-204ENST00000589078 CEBPAP49715 358 aaPredicted RBP15.34■□□□□ 0.05
APOC1-204ENST00000589078 UHRF1BP1Q6BDS2 1440 aa15.34■□□□□ 0.05
APOC1-204ENST00000589078 TROQ12816 1431 aaPredicted RBP15.32■□□□□ 0.04
APOC1-204ENST00000589078 C3P01024 1663 aa15.32■□□□□ 0.04
APOC1-204ENST00000589078 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
APOC1-204ENST00000589078 KDM5CP41229 1560 aa15.31■□□□□ 0.04
APOC1-204ENST00000589078 KIF14Q15058 1648 aa15.31■□□□□ 0.04
APOC1-204ENST00000589078 ZNF518AQ6AHZ1 1483 aa15.3■□□□□ 0.04
APOC1-204ENST00000589078 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
APOC1-204ENST00000589078 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
APOC1-204ENST00000589078 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
APOC1-204ENST00000589078 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
APOC1-204ENST00000589078 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
APOC1-204ENST00000589078 PTPRTO14522 1441 aa15.27■□□□□ 0.04
APOC1-204ENST00000589078 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.03
APOC1-204ENST00000589078 LTBP4Q8N2S1 1624 aa15.26■□□□□ 0.03
APOC1-204ENST00000589078 EFCAB2Q5VUJ9 269 aa15.26■□□□□ 0.03
APOC1-204ENST00000589078 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
APOC1-204ENST00000589078 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
APOC1-204ENST00000589078 APLP2Q06481 763 aa15.22■□□□□ 0.03
APOC1-204ENST00000589078 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
APOC1-204ENST00000589078 LRRIQ1Q96JM4 1722 aa15.22■□□□□ 0.03
APOC1-204ENST00000589078 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
APOC1-204ENST00000589078 NCOA1Q15788 1441 aa15.21■□□□□ 0.03
APOC1-204ENST00000589078 ITSN2Q9NZM3 1697 aa15.2■□□□□ 0.02
APOC1-204ENST00000589078 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
APOC1-204ENST00000589078 AGLP35573 1532 aa15.2■□□□□ 0.02
APOC1-204ENST00000589078 MLH3Q9UHC1 1453 aa15.2■□□□□ 0.02
APOC1-204ENST00000589078 ABCC1P33527 1531 aa15.19■□□□□ 0.02
APOC1-204ENST00000589078 PREX2Q70Z35 1606 aa15.19■□□□□ 0.02
APOC1-204ENST00000589078 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
APOC1-204ENST00000589078 KIDINS220Q9ULH0 1771 aa15.17■□□□□ 0.02
APOC1-204ENST00000589078 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
APOC1-204ENST00000589078 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
APOC1-204ENST00000589078 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
APOC1-204ENST00000589078 ESF1Q9H501 851 aaKnown RBP15.16■□□□□ 0.02
APOC1-204ENST00000589078 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
APOC1-204ENST00000589078 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
APOC1-204ENST00000589078 CNTLNQ9NXG0 1405 aa15.14■□□□□ 0.01
APOC1-204ENST00000589078 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
APOC1-204ENST00000589078 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
APOC1-204ENST00000589078 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
APOC1-204ENST00000589078 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
APOC1-204ENST00000589078 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
APOC1-204ENST00000589078 NPATQ14207 1427 aa15.11■□□□□ 0.01
APOC1-204ENST00000589078 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
APOC1-204ENST00000589078 LRRC9Q6ZRR7 1453 aa15.1■□□□□ 0.01
APOC1-204ENST00000589078 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
APOC1-204ENST00000589078 GPATCH8Q9UKJ3 1502 aaKnown RBP15.09■□□□□ 0.01
APOC1-204ENST00000589078 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
APOC1-204ENST00000589078 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
APOC1-204ENST00000589078 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
APOC1-204ENST00000589078 UBAP1LF5GYI3 381 aa15.07■□□□□ 0
APOC1-204ENST00000589078 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
APOC1-204ENST00000589078 NCOA2Q15596 1464 aa15.07■□□□□ 0
APOC1-204ENST00000589078 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
APOC1-204ENST00000589078 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
APOC1-204ENST00000589078 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
APOC1-204ENST00000589078 PLA2R1Q13018 1463 aa15.05■□□□□ -0
APOC1-204ENST00000589078 SYCP2Q9BX26 1530 aa15.05■□□□□ -0
APOC1-204ENST00000589078 PLXNC1O60486 1568 aa15.04■□□□□ -0
APOC1-204ENST00000589078 TCOF1Q13428 1488 aaKnown RBP15.04■□□□□ -0
APOC1-204ENST00000589078 ZMYM3Q14202 1370 aa15.04■□□□□ -0
APOC1-204ENST00000589078 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
APOC1-204ENST00000589078 INO80Q9ULG1 1556 aaPredicted RBP15.02■□□□□ -0
APOC1-204ENST00000589078 ATP7AQ04656 1500 aa15.02■□□□□ -0
APOC1-204ENST00000589078 KIAA1107Q9UPP5 1409 aa15.02■□□□□ -0
APOC1-204ENST00000589078 PTPRKQ15262 1439 aa15□□□□□ -0.01
APOC1-204ENST00000589078 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
APOC1-204ENST00000589078 PKD2Q13563 968 aa14.99□□□□□ -0.01
APOC1-204ENST00000589078 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
APOC1-204ENST00000589078 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
APOC1-204ENST00000589078 A2MP01023 1474 aa14.97□□□□□ -0.01
APOC1-204ENST00000589078 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms