RNA–Protein interactions for RNA: ENST00000588782.1

LINC01028-202, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 3 BASIC

Gene LINC01028, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-202ENST00000588782 NLRP6P59044 892 aa8.92□□□□□ -0.98
LINC01028-202ENST00000588782 HOXB3P14651 431 aaPredicted RBP8.91□□□□□ -0.98
LINC01028-202ENST00000588782 HOXB1P14653 301 aaPredicted RBP8.9□□□□□ -0.98
LINC01028-202ENST00000588782 MYO15BQ96JP2 1530 aa8.9□□□□□ -0.99
LINC01028-202ENST00000588782 FAM205CA6NFA0 338 aa8.89□□□□□ -0.99
LINC01028-202ENST00000588782 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
LINC01028-202ENST00000588782 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
LINC01028-202ENST00000588782 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
LINC01028-202ENST00000588782 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
LINC01028-202ENST00000588782 ECM2O94769 699 aaPredicted RBP8.88□□□□□ -0.99
LINC01028-202ENST00000588782 MS4A4AQ96JQ5 239 aa8.88□□□□□ -0.99
LINC01028-202ENST00000588782 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
LINC01028-202ENST00000588782 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
LINC01028-202ENST00000588782 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
LINC01028-202ENST00000588782 STK25O00506 426 aa8.84□□□□□ -0.99
LINC01028-202ENST00000588782 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
LINC01028-202ENST00000588782 ERBB3P21860 1342 aa8.82□□□□□ -1
LINC01028-202ENST00000588782 POTEB3A0JP26 581 aa8.82□□□□□ -1
LINC01028-202ENST00000588782 POTEBQ6S5H4 581 aa8.82□□□□□ -1
LINC01028-202ENST00000588782 TMEM92Q6UXU6 159 aa8.82□□□□□ -1
LINC01028-202ENST00000588782 PKD2Q13563 968 aa8.8□□□□□ -1
LINC01028-202ENST00000588782 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
LINC01028-202ENST00000588782 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
LINC01028-202ENST00000588782 MFRPQ9BY79 579 aa8.79□□□□□ -1
LINC01028-202ENST00000588782 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
LINC01028-202ENST00000588782 ERCC6Q03468 1493 aa8.77□□□□□ -1.01
LINC01028-202ENST00000588782 RGL2O15211 777 aa8.76□□□□□ -1.01
LINC01028-202ENST00000588782 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
LINC01028-202ENST00000588782 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
LINC01028-202ENST00000588782 KIF3CO14782 793 aa8.71□□□□□ -1.02
LINC01028-202ENST00000588782 ARSIQ5FYB1 569 aa8.7□□□□□ -1.02
LINC01028-202ENST00000588782 TMC2Q8TDI7 906 aa8.7□□□□□ -1.02
LINC01028-202ENST00000588782 SLC34A2O95436 690 aa8.69□□□□□ -1.02
LINC01028-202ENST00000588782 C2orf72A6NCS6 295 aa8.68□□□□□ -1.02
LINC01028-202ENST00000588782 PTGER2P43116 358 aa8.68□□□□□ -1.02
LINC01028-202ENST00000588782 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
LINC01028-202ENST00000588782 HS6ST3Q8IZP7 471 aa8.65□□□□□ -1.02
LINC01028-202ENST00000588782 SCRIBQ14160 1630 aa8.62□□□□□ -1.03
LINC01028-202ENST00000588782 PBX2P40425 430 aa8.62□□□□□ -1.03
LINC01028-202ENST00000588782 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
LINC01028-202ENST00000588782 PSDA5PKW4 1024 aaPredicted RBP8.61□□□□□ -1.03
LINC01028-202ENST00000588782 RNF166Q96A37 237 aaPredicted RBP8.61□□□□□ -1.03
LINC01028-202ENST00000588782 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
LINC01028-202ENST00000588782 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
LINC01028-202ENST00000588782 PPP1R37O75864 691 aa8.6□□□□□ -1.03
LINC01028-202ENST00000588782 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC01028-202ENST00000588782 NUDT7P0C024 238 aa8.58□□□□□ -1.04
LINC01028-202ENST00000588782 FOXK1P85037 733 aa8.57□□□□□ -1.04
LINC01028-202ENST00000588782 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
LINC01028-202ENST00000588782 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
LINC01028-202ENST00000588782 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
LINC01028-202ENST00000588782 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC01028-202ENST00000588782 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
LINC01028-202ENST00000588782 LHX6Q9UPM6 363 aa8.56□□□□□ -1.04
LINC01028-202ENST00000588782 TBC1D12O60347 775 aa8.55□□□□□ -1.04
LINC01028-202ENST00000588782 DCAF1Q9Y4B6 1507 aa8.53□□□□□ -1.04
LINC01028-202ENST00000588782 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
LINC01028-202ENST00000588782 PLPP6Q8IY26 295 aa8.52□□□□□ -1.05
LINC01028-202ENST00000588782 KDM4FA0A1W2PPD8 638 aa8.5□□□□□ -1.05
LINC01028-202ENST00000588782 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
LINC01028-202ENST00000588782 THOC2Q8NI27 1593 aaKnown RBP8.5□□□□□ -1.05
LINC01028-202ENST00000588782 NESP48681 1621 aa8.49□□□□□ -1.05
LINC01028-202ENST00000588782 DSG2Q14126 1118 aa8.48□□□□□ -1.05
LINC01028-202ENST00000588782 PPP4R3BQ5MIZ7 849 aa8.46□□□□□ -1.06
LINC01028-202ENST00000588782 TK2O00142 265 aa8.45□□□□□ -1.06
LINC01028-202ENST00000588782 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
LINC01028-202ENST00000588782 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
LINC01028-202ENST00000588782 POTEEQ6S8J3 1075 aa8.44□□□□□ -1.06
LINC01028-202ENST00000588782 KCNH8Q96L42 1107 aa8.44□□□□□ -1.06
LINC01028-202ENST00000588782 PDE4AP27815 886 aa8.43□□□□□ -1.06
LINC01028-202ENST00000588782 ADGRD1Q6QNK2 874 aa8.43□□□□□ -1.06
LINC01028-202ENST00000588782 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
LINC01028-202ENST00000588782 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
LINC01028-202ENST00000588782 HCSTQ9UBK5 93 aa8.42□□□□□ -1.06
LINC01028-202ENST00000588782 ZCCHC6Q5VYS8 1495 aaKnown RBP8.41□□□□□ -1.06
LINC01028-202ENST00000588782 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
LINC01028-202ENST00000588782 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
LINC01028-202ENST00000588782 PDS5BQ9NTI5 1447 aa8.38□□□□□ -1.07
LINC01028-202ENST00000588782 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
LINC01028-202ENST00000588782 ATAD2BQ9ULI0 1458 aa8.38□□□□□ -1.07
LINC01028-202ENST00000588782 RIMBP3CA6NJZ7 1639 aa8.37□□□□□ -1.07
LINC01028-202ENST00000588782 RIMBP3BA6NNM3 1639 aa8.37□□□□□ -1.07
LINC01028-202ENST00000588782 RIMBP3Q9UFD9 1639 aa8.37□□□□□ -1.07
LINC01028-202ENST00000588782 HRO43593 1189 aa8.36□□□□□ -1.07
LINC01028-202ENST00000588782 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
LINC01028-202ENST00000588782 CYB5RLQ6IPT4 315 aa8.36□□□□□ -1.07
LINC01028-202ENST00000588782 SMARCA2P51531 1590 aa8.35□□□□□ -1.07
LINC01028-202ENST00000588782 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
LINC01028-202ENST00000588782 PSEN2P49810 448 aa8.35□□□□□ -1.07
LINC01028-202ENST00000588782 NCKAP5LQ9HCH0 1330 aa8.34□□□□□ -1.07
LINC01028-202ENST00000588782 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
LINC01028-202ENST00000588782 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01028-202ENST00000588782 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
LINC01028-202ENST00000588782 SLC4A5Q9BY07 1137 aa8.34□□□□□ -1.07
LINC01028-202ENST00000588782 ANO8Q9HCE9 1232 aaPredicted RBP8.34□□□□□ -1.07
LINC01028-202ENST00000588782 ZNF454Q8N9F8 522 aa8.33□□□□□ -1.08
LINC01028-202ENST00000588782 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
LINC01028-202ENST00000588782 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
LINC01028-202ENST00000588782 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
LINC01028-202ENST00000588782 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms