RNA–Protein interactions for RNA: ENST00000588599.5

SNRPD2-207, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-207ENST00000588599 HECW1Q76N89 1606 aa18.64■□□□□ 0.57
SNRPD2-207ENST00000588599 HSPA2P54652 639 aa18.64■□□□□ 0.57
SNRPD2-207ENST00000588599 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
SNRPD2-207ENST00000588599 POGZQ7Z3K3 1410 aa18.64■□□□□ 0.57
SNRPD2-207ENST00000588599 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
SNRPD2-207ENST00000588599 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
SNRPD2-207ENST00000588599 ZFYVE16Q7Z3T8 1539 aa18.63■□□□□ 0.57
SNRPD2-207ENST00000588599 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
SNRPD2-207ENST00000588599 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
SNRPD2-207ENST00000588599 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
SNRPD2-207ENST00000588599 ATP10AO60312 1499 aa18.57■□□□□ 0.56
SNRPD2-207ENST00000588599 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
SNRPD2-207ENST00000588599 KIF14Q15058 1648 aa18.56■□□□□ 0.56
SNRPD2-207ENST00000588599 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
SNRPD2-207ENST00000588599 FER1L4A9Z1Z3 1794 aa18.54■□□□□ 0.56
SNRPD2-207ENST00000588599 TROQ12816 1431 aaPredicted RBP18.53■□□□□ 0.56
SNRPD2-207ENST00000588599 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
SNRPD2-207ENST00000588599 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
SNRPD2-207ENST00000588599 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
SNRPD2-207ENST00000588599 ARHGAP5Q13017 1502 aa18.49■□□□□ 0.55
SNRPD2-207ENST00000588599 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
SNRPD2-207ENST00000588599 CDC42BPBQ9Y5S2 1711 aa18.48■□□□□ 0.55
SNRPD2-207ENST00000588599 CLIP1P30622 1438 aa18.48■□□□□ 0.55
SNRPD2-207ENST00000588599 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
SNRPD2-207ENST00000588599 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.55
SNRPD2-207ENST00000588599 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
SNRPD2-207ENST00000588599 KDM5CP41229 1560 aa18.44■□□□□ 0.54
SNRPD2-207ENST00000588599 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
SNRPD2-207ENST00000588599 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
SNRPD2-207ENST00000588599 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
SNRPD2-207ENST00000588599 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
SNRPD2-207ENST00000588599 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
SNRPD2-207ENST00000588599 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
SNRPD2-207ENST00000588599 PREX2Q70Z35 1606 aa18.37■□□□□ 0.53
SNRPD2-207ENST00000588599 ABCA6Q8N139 1617 aa18.37■□□□□ 0.53
SNRPD2-207ENST00000588599 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
SNRPD2-207ENST00000588599 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
SNRPD2-207ENST00000588599 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
SNRPD2-207ENST00000588599 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
SNRPD2-207ENST00000588599 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
SNRPD2-207ENST00000588599 ABCC1P33527 1531 aa18.35■□□□□ 0.53
SNRPD2-207ENST00000588599 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
SNRPD2-207ENST00000588599 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
SNRPD2-207ENST00000588599 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
SNRPD2-207ENST00000588599 UHRF1BP1Q6BDS2 1440 aa18.33■□□□□ 0.53
SNRPD2-207ENST00000588599 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNRPD2-207ENST00000588599 C3P01024 1663 aa18.33■□□□□ 0.52
SNRPD2-207ENST00000588599 AGLP35573 1532 aa18.33■□□□□ 0.52
SNRPD2-207ENST00000588599 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
SNRPD2-207ENST00000588599 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
SNRPD2-207ENST00000588599 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
SNRPD2-207ENST00000588599 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.52
SNRPD2-207ENST00000588599 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
SNRPD2-207ENST00000588599 PTPRTO14522 1441 aa18.24■□□□□ 0.51
SNRPD2-207ENST00000588599 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
SNRPD2-207ENST00000588599 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
SNRPD2-207ENST00000588599 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
SNRPD2-207ENST00000588599 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
SNRPD2-207ENST00000588599 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
SNRPD2-207ENST00000588599 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
SNRPD2-207ENST00000588599 GGT6Q6P531 493 aa18.19■□□□□ 0.5
SNRPD2-207ENST00000588599 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
SNRPD2-207ENST00000588599 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
SNRPD2-207ENST00000588599 NPATQ14207 1427 aa18.17■□□□□ 0.5
SNRPD2-207ENST00000588599 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
SNRPD2-207ENST00000588599 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
SNRPD2-207ENST00000588599 LTBP4Q8N2S1 1624 aa18.16■□□□□ 0.5
SNRPD2-207ENST00000588599 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
SNRPD2-207ENST00000588599 A2MP01023 1474 aa18.16■□□□□ 0.5
SNRPD2-207ENST00000588599 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
SNRPD2-207ENST00000588599 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
SNRPD2-207ENST00000588599 CAMSAP1Q5T5Y3 1602 aa18.15■□□□□ 0.5
SNRPD2-207ENST00000588599 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
SNRPD2-207ENST00000588599 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
SNRPD2-207ENST00000588599 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
SNRPD2-207ENST00000588599 PLXNC1O60486 1568 aa18.12■□□□□ 0.49
SNRPD2-207ENST00000588599 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
SNRPD2-207ENST00000588599 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
SNRPD2-207ENST00000588599 DISP3Q9P2K9 1392 aa18.1■□□□□ 0.49
SNRPD2-207ENST00000588599 ILDR2Q71H61 639 aa18.1■□□□□ 0.49
SNRPD2-207ENST00000588599 TIAM1Q13009 1591 aa18.08■□□□□ 0.49
SNRPD2-207ENST00000588599 PKD2Q13563 968 aa18.08■□□□□ 0.48
SNRPD2-207ENST00000588599 ADGBQ8N7X0 1667 aa18.08■□□□□ 0.48
SNRPD2-207ENST00000588599 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
SNRPD2-207ENST00000588599 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
SNRPD2-207ENST00000588599 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
SNRPD2-207ENST00000588599 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
SNRPD2-207ENST00000588599 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
SNRPD2-207ENST00000588599 KIF3BO15066 747 aa18.04■□□□□ 0.48
SNRPD2-207ENST00000588599 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
SNRPD2-207ENST00000588599 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
SNRPD2-207ENST00000588599 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
SNRPD2-207ENST00000588599 FBXO31Q5XUX0 539 aaPredicted RBP18.03■□□□□ 0.48
SNRPD2-207ENST00000588599 ZNF142P52746 1687 aaPredicted RBP18.03■□□□□ 0.48
SNRPD2-207ENST00000588599 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
SNRPD2-207ENST00000588599 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
SNRPD2-207ENST00000588599 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
SNRPD2-207ENST00000588599 UBAP1LF5GYI3 381 aa17.99■□□□□ 0.47
SNRPD2-207ENST00000588599 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
SNRPD2-207ENST00000588599 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms