RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
LSM14A-206ENST00000588582 DNTTIP2Q5QJE6 756 aaKnown RBP13.53□□□□□ -0.24
LSM14A-206ENST00000588582 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
LSM14A-206ENST00000588582 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.24
LSM14A-206ENST00000588582 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
LSM14A-206ENST00000588582 WIZO95785 1651 aa13.52□□□□□ -0.25
LSM14A-206ENST00000588582 PDE4CQ08493 712 aa13.51□□□□□ -0.25
LSM14A-206ENST00000588582 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
LSM14A-206ENST00000588582 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
LSM14A-206ENST00000588582 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
LSM14A-206ENST00000588582 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
LSM14A-206ENST00000588582 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
LSM14A-206ENST00000588582 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
LSM14A-206ENST00000588582 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
LSM14A-206ENST00000588582 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
LSM14A-206ENST00000588582 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
LSM14A-206ENST00000588582 ESPNB1AK53 854 aa13.46□□□□□ -0.25
LSM14A-206ENST00000588582 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
LSM14A-206ENST00000588582 R3HCC1Q9Y3T6 440 aaKnown RBP13.46□□□□□ -0.25
LSM14A-206ENST00000588582 PTMAP06454 111 aaKnown RBP13.44□□□□□ -0.26
LSM14A-206ENST00000588582 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
LSM14A-206ENST00000588582 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
LSM14A-206ENST00000588582 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
LSM14A-206ENST00000588582 KIF21BO75037 1637 aa13.42□□□□□ -0.26
LSM14A-206ENST00000588582 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
LSM14A-206ENST00000588582 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
LSM14A-206ENST00000588582 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
LSM14A-206ENST00000588582 TRAK2O60296 914 aa13.39□□□□□ -0.27
LSM14A-206ENST00000588582 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
LSM14A-206ENST00000588582 C20orf194Q5TEA3 1177 aa13.39□□□□□ -0.27
LSM14A-206ENST00000588582 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
LSM14A-206ENST00000588582 CLCN1P35523 988 aa13.38□□□□□ -0.27
LSM14A-206ENST00000588582 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
LSM14A-206ENST00000588582 PDCL3Q9H2J4 239 aa13.38□□□□□ -0.27
LSM14A-206ENST00000588582 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
LSM14A-206ENST00000588582 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
LSM14A-206ENST00000588582 HSP90AB1P08238 724 aaKnown RBP13.37□□□□□ -0.27
LSM14A-206ENST00000588582 MRE11P49959 708 aa13.37□□□□□ -0.27
LSM14A-206ENST00000588582 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
LSM14A-206ENST00000588582 TPM2P07951 284 aa13.37□□□□□ -0.27
LSM14A-206ENST00000588582 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
LSM14A-206ENST00000588582 HSCBQ8IWL3 235 aa13.36□□□□□ -0.27
LSM14A-206ENST00000588582 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
LSM14A-206ENST00000588582 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
LSM14A-206ENST00000588582 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
LSM14A-206ENST00000588582 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
LSM14A-206ENST00000588582 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
LSM14A-206ENST00000588582 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
LSM14A-206ENST00000588582 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
LSM14A-206ENST00000588582 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
LSM14A-206ENST00000588582 AAMPQ13685 434 aa13.32□□□□□ -0.28
LSM14A-206ENST00000588582 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
LSM14A-206ENST00000588582 MPNDQ8N594 471 aa13.31□□□□□ -0.28
LSM14A-206ENST00000588582 MCM4P33991 863 aa13.31□□□□□ -0.28
LSM14A-206ENST00000588582 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
LSM14A-206ENST00000588582 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
LSM14A-206ENST00000588582 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
LSM14A-206ENST00000588582 FGD1P98174 961 aa13.29□□□□□ -0.28
LSM14A-206ENST00000588582 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
LSM14A-206ENST00000588582 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
LSM14A-206ENST00000588582 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
LSM14A-206ENST00000588582 UQCRHP07919 91 aa13.28□□□□□ -0.28
LSM14A-206ENST00000588582 CHMP4BQ9H444 224 aaKnown RBP13.28□□□□□ -0.28
LSM14A-206ENST00000588582 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.28
LSM14A-206ENST00000588582 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
LSM14A-206ENST00000588582 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.28
LSM14A-206ENST00000588582 GBP4Q96PP9 640 aa13.27□□□□□ -0.28
LSM14A-206ENST00000588582 COG6Q9Y2V7 657 aa13.27□□□□□ -0.28
LSM14A-206ENST00000588582 RGL3Q3MIN7 710 aa13.27□□□□□ -0.29
LSM14A-206ENST00000588582 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.29
LSM14A-206ENST00000588582 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
LSM14A-206ENST00000588582 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
LSM14A-206ENST00000588582 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
LSM14A-206ENST00000588582 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
LSM14A-206ENST00000588582 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
LSM14A-206ENST00000588582 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
LSM14A-206ENST00000588582 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
LSM14A-206ENST00000588582 IGSF3O75054 1194 aa13.25□□□□□ -0.29
LSM14A-206ENST00000588582 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
LSM14A-206ENST00000588582 CBX1P83916 185 aa13.25□□□□□ -0.29
LSM14A-206ENST00000588582 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
LSM14A-206ENST00000588582 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
LSM14A-206ENST00000588582 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
LSM14A-206ENST00000588582 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
LSM14A-206ENST00000588582 ZNF771Q7L3S4 317 aaPredicted RBP13.24□□□□□ -0.29
LSM14A-206ENST00000588582 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
LSM14A-206ENST00000588582 SEC24BO95487 1268 aa13.23□□□□□ -0.29
LSM14A-206ENST00000588582 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
LSM14A-206ENST00000588582 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
LSM14A-206ENST00000588582 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
LSM14A-206ENST00000588582 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
LSM14A-206ENST00000588582 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
LSM14A-206ENST00000588582 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
LSM14A-206ENST00000588582 RALBP1Q15311 655 aa13.21□□□□□ -0.3
LSM14A-206ENST00000588582 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
LSM14A-206ENST00000588582 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
LSM14A-206ENST00000588582 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
LSM14A-206ENST00000588582 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
LSM14A-206ENST00000588582 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
LSM14A-206ENST00000588582 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms