RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CDC42BPAQ5VT25 1732 aa24.41■■□□□ 1.5
NFIX-210ENST00000588228 ROCK1Q13464 1354 aa24.39■■□□□ 1.49
NFIX-210ENST00000588228 CHIC2Q9UKJ5 165 aa24.37■■□□□ 1.49
NFIX-210ENST00000588228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.36■■□□□ 1.49
NFIX-210ENST00000588228 ZNF777Q9ULD5 760 aaPredicted RBP24.35■■□□□ 1.49
NFIX-210ENST00000588228 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
NFIX-210ENST00000588228 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
NFIX-210ENST00000588228 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
NFIX-210ENST00000588228 TTC37Q6PGP7 1564 aa24.32■■□□□ 1.48
NFIX-210ENST00000588228 MAPKBP1O60336 1514 aa24.31■■□□□ 1.48
NFIX-210ENST00000588228 KCNH8Q96L42 1107 aa24.27■■□□□ 1.48
NFIX-210ENST00000588228 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
NFIX-210ENST00000588228 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
NFIX-210ENST00000588228 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
NFIX-210ENST00000588228 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
NFIX-210ENST00000588228 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
NFIX-210ENST00000588228 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
NFIX-210ENST00000588228 ARHGEF5Q12774 1597 aa24.24■■□□□ 1.47
NFIX-210ENST00000588228 SAMD9LQ8IVG5 1584 aa24.24■■□□□ 1.47
NFIX-210ENST00000588228 ARHGAP5Q13017 1502 aa24.24■■□□□ 1.47
NFIX-210ENST00000588228 MYO5CQ9NQX4 1742 aa24.23■■□□□ 1.47
NFIX-210ENST00000588228 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
NFIX-210ENST00000588228 PLCH2O75038 1416 aa24.23■■□□□ 1.47
NFIX-210ENST00000588228 NCOA1Q15788 1441 aa24.23■■□□□ 1.47
NFIX-210ENST00000588228 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
NFIX-210ENST00000588228 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
NFIX-210ENST00000588228 ANKRD30AQ9BXX3 1397 aa24.2■■□□□ 1.47
NFIX-210ENST00000588228 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.46
NFIX-210ENST00000588228 KDM6BO15054 1643 aa24.19■■□□□ 1.46
NFIX-210ENST00000588228 C9orf84Q5VXU9 1444 aa24.18■■□□□ 1.46
NFIX-210ENST00000588228 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
NFIX-210ENST00000588228 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
NFIX-210ENST00000588228 ASXL2Q76L83 1435 aa24.18■■□□□ 1.46
NFIX-210ENST00000588228 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
NFIX-210ENST00000588228 ARAP3Q8WWN8 1544 aa24.17■■□□□ 1.46
NFIX-210ENST00000588228 TSPY4P0CV99 314 aa24.17■■□□□ 1.46
NFIX-210ENST00000588228 TSPY10P0CW01 314 aa24.17■■□□□ 1.46
NFIX-210ENST00000588228 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.462e-6■■■■□ 21.1
NFIX-210ENST00000588228 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
NFIX-210ENST00000588228 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
NFIX-210ENST00000588228 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
NFIX-210ENST00000588228 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
NFIX-210ENST00000588228 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
NFIX-210ENST00000588228 ANKRD50Q9ULJ7 1429 aa24.07■■□□□ 1.44
NFIX-210ENST00000588228 ABCC1P33527 1531 aa24.06■■□□□ 1.44
NFIX-210ENST00000588228 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
NFIX-210ENST00000588228 SIN3AQ96ST3 1273 aa24.05■■□□□ 1.44
NFIX-210ENST00000588228 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
NFIX-210ENST00000588228 MPHOSPH9Q99550 1183 aa24.05■■□□□ 1.44
NFIX-210ENST00000588228 DENND4BO75064 1496 aaPredicted RBP24.04■■□□□ 1.44
NFIX-210ENST00000588228 KIF15Q9NS87 1388 aa24.04■■□□□ 1.44
NFIX-210ENST00000588228 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
NFIX-210ENST00000588228 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
NFIX-210ENST00000588228 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
NFIX-210ENST00000588228 NEUROD1Q13562 356 aa24.01■■□□□ 1.43
NFIX-210ENST00000588228 FANCAO15360 1455 aa24■■□□□ 1.43
NFIX-210ENST00000588228 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
NFIX-210ENST00000588228 PLXNC1O60486 1568 aa23.97■■□□□ 1.43
NFIX-210ENST00000588228 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.43
NFIX-210ENST00000588228 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.43
NFIX-210ENST00000588228 PZPP20742 1482 aa23.95■■□□□ 1.42
NFIX-210ENST00000588228 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
NFIX-210ENST00000588228 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
NFIX-210ENST00000588228 KDM5DQ9BY66 1539 aa23.92■■□□□ 1.42
NFIX-210ENST00000588228 RTEL1-TNFRSF6BF6WH68 1400 aa23.91■■□□□ 1.42
NFIX-210ENST00000588228 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
NFIX-210ENST00000588228 ADGRL1O94910 1474 aa23.9■■□□□ 1.42
NFIX-210ENST00000588228 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.42
NFIX-210ENST00000588228 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
NFIX-210ENST00000588228 SCAPERQ9BY12 1400 aa23.87■■□□□ 1.41
NFIX-210ENST00000588228 NUP155O75694 1391 aa23.87■■□□□ 1.41
NFIX-210ENST00000588228 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
NFIX-210ENST00000588228 CFAP74Q9C0B2 1584 aa23.87■■□□□ 1.41
NFIX-210ENST00000588228 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
NFIX-210ENST00000588228 ZFYVE16Q7Z3T8 1539 aa23.85■■□□□ 1.41
NFIX-210ENST00000588228 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
NFIX-210ENST00000588228 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
NFIX-210ENST00000588228 FOXD1Q16676 465 aa23.84■■□□□ 1.41
NFIX-210ENST00000588228 UNC13BO14795 1591 aa23.81■■□□□ 1.4
NFIX-210ENST00000588228 PKD2Q13563 968 aa23.8■■□□□ 1.4
NFIX-210ENST00000588228 GLI2P10070 1586 aa23.8■■□□□ 1.4
NFIX-210ENST00000588228 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
NFIX-210ENST00000588228 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
NFIX-210ENST00000588228 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
NFIX-210ENST00000588228 NEO1Q92859 1461 aa23.79■■□□□ 1.4
NFIX-210ENST00000588228 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
NFIX-210ENST00000588228 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
NFIX-210ENST00000588228 MAGI2Q86UL8 1455 aa23.75■■□□□ 1.39
NFIX-210ENST00000588228 MAP3K4Q9Y6R4 1608 aa23.75■■□□□ 1.39
NFIX-210ENST00000588228 POGZQ7Z3K3 1410 aa23.74■■□□□ 1.39
NFIX-210ENST00000588228 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
NFIX-210ENST00000588228 KDM5CP41229 1560 aa23.71■■□□□ 1.39
NFIX-210ENST00000588228 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.39
NFIX-210ENST00000588228 DIP2BQ9P265 1576 aa23.69■■□□□ 1.38
NFIX-210ENST00000588228 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
NFIX-210ENST00000588228 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
NFIX-210ENST00000588228 TEX14Q8IWB6 1497 aa23.67■■□□□ 1.38
NFIX-210ENST00000588228 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
NFIX-210ENST00000588228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.381e-8■■■■■ 27.4
NFIX-210ENST00000588228 FAM69CQ0P6D2 419 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms