RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
LAMA3-209ENST00000588164 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
LAMA3-209ENST00000588164 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
LAMA3-209ENST00000588164 SETD1BQ9UPS6 1966 aaKnown RBP11.95□□□□□ -0.5
LAMA3-209ENST00000588164 CFAP74Q9C0B2 1584 aa11.95□□□□□ -0.5
LAMA3-209ENST00000588164 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
LAMA3-209ENST00000588164 EFCAB5A4FU69 1503 aa11.94□□□□□ -0.5
LAMA3-209ENST00000588164 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
LAMA3-209ENST00000588164 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
LAMA3-209ENST00000588164 AKNAQ7Z591 1439 aa11.93□□□□□ -0.5
LAMA3-209ENST00000588164 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
LAMA3-209ENST00000588164 PTPRTO14522 1441 aa11.92□□□□□ -0.5
LAMA3-209ENST00000588164 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
LAMA3-209ENST00000588164 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
LAMA3-209ENST00000588164 DENND4BO75064 1496 aaPredicted RBP11.9□□□□□ -0.5
LAMA3-209ENST00000588164 ARHGEF12Q9NZN5 1544 aa11.9□□□□□ -0.5
LAMA3-209ENST00000588164 ATP10BO94823 1461 aa11.89□□□□□ -0.51
LAMA3-209ENST00000588164 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
LAMA3-209ENST00000588164 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
LAMA3-209ENST00000588164 MED1Q15648 1581 aaPredicted RBP11.83□□□□□ -0.52
LAMA3-209ENST00000588164 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
LAMA3-209ENST00000588164 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
LAMA3-209ENST00000588164 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-209ENST00000588164 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
LAMA3-209ENST00000588164 POTEHQ6S545 545 aa11.8□□□□□ -0.52
LAMA3-209ENST00000588164 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
LAMA3-209ENST00000588164 C3P01024 1663 aa11.78□□□□□ -0.52
LAMA3-209ENST00000588164 NCOA1Q15788 1441 aa11.77□□□□□ -0.52
LAMA3-209ENST00000588164 ATP10AO60312 1499 aa11.77□□□□□ -0.52
LAMA3-209ENST00000588164 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
LAMA3-209ENST00000588164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.76□□□□□ -0.53
LAMA3-209ENST00000588164 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
LAMA3-209ENST00000588164 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
LAMA3-209ENST00000588164 MLECQ14165 292 aa11.74□□□□□ -0.53
LAMA3-209ENST00000588164 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
LAMA3-209ENST00000588164 NUP153P49790 1475 aaKnown RBP11.73□□□□□ -0.53
LAMA3-209ENST00000588164 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
LAMA3-209ENST00000588164 UBAP1LF5GYI3 381 aa11.71□□□□□ -0.53
LAMA3-209ENST00000588164 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.53
LAMA3-209ENST00000588164 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
LAMA3-209ENST00000588164 CAMSAP1Q5T5Y3 1602 aa11.7□□□□□ -0.54
LAMA3-209ENST00000588164 KDM5CP41229 1560 aa11.69□□□□□ -0.54
LAMA3-209ENST00000588164 AGLP35573 1532 aa11.69□□□□□ -0.54
LAMA3-209ENST00000588164 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
LAMA3-209ENST00000588164 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
LAMA3-209ENST00000588164 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
LAMA3-209ENST00000588164 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
LAMA3-209ENST00000588164 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
LAMA3-209ENST00000588164 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
LAMA3-209ENST00000588164 SUPT6HQ7KZ85 1726 aaKnown RBP11.67□□□□□ -0.54
LAMA3-209ENST00000588164 ZNF518AQ6AHZ1 1483 aa11.67□□□□□ -0.54
LAMA3-209ENST00000588164 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
LAMA3-209ENST00000588164 PLA2R1Q13018 1463 aa11.66□□□□□ -0.54
LAMA3-209ENST00000588164 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
LAMA3-209ENST00000588164 PLCH2O75038 1416 aa11.66□□□□□ -0.54
LAMA3-209ENST00000588164 NPATQ14207 1427 aa11.66□□□□□ -0.54
LAMA3-209ENST00000588164 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
LAMA3-209ENST00000588164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
LAMA3-209ENST00000588164 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
LAMA3-209ENST00000588164 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
LAMA3-209ENST00000588164 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-209ENST00000588164 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-209ENST00000588164 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
LAMA3-209ENST00000588164 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
LAMA3-209ENST00000588164 ABCA6Q8N139 1617 aa11.62□□□□□ -0.55
LAMA3-209ENST00000588164 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
LAMA3-209ENST00000588164 HSPA1LP34931 641 aa11.62□□□□□ -0.55
LAMA3-209ENST00000588164 CPS1P31327 1500 aa11.61□□□□□ -0.55
LAMA3-209ENST00000588164 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
LAMA3-209ENST00000588164 PKD2Q13563 968 aa11.61□□□□□ -0.55
LAMA3-209ENST00000588164 MLH3Q9UHC1 1453 aa11.59□□□□□ -0.55
LAMA3-209ENST00000588164 TOM1O60784 492 aa11.59□□□□□ -0.55
LAMA3-209ENST00000588164 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
LAMA3-209ENST00000588164 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.55
LAMA3-209ENST00000588164 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
LAMA3-209ENST00000588164 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
LAMA3-209ENST00000588164 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
LAMA3-209ENST00000588164 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
LAMA3-209ENST00000588164 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
LAMA3-209ENST00000588164 BCANQ96GW7 911 aa11.55□□□□□ -0.56
LAMA3-209ENST00000588164 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
LAMA3-209ENST00000588164 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
LAMA3-209ENST00000588164 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
LAMA3-209ENST00000588164 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
LAMA3-209ENST00000588164 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
LAMA3-209ENST00000588164 KIDINS220Q9ULH0 1771 aa11.53□□□□□ -0.56
LAMA3-209ENST00000588164 KIF14Q15058 1648 aa11.53□□□□□ -0.56
LAMA3-209ENST00000588164 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.56
LAMA3-209ENST00000588164 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.57
LAMA3-209ENST00000588164 PIP4K2BP78356 416 aa11.52□□□□□ -0.57
LAMA3-209ENST00000588164 SHANK2Q9UPX8 1470 aa11.51□□□□□ -0.57
LAMA3-209ENST00000588164 CDK13Q14004 1512 aaKnown RBP11.51□□□□□ -0.57
LAMA3-209ENST00000588164 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
LAMA3-209ENST00000588164 CDC42BPBQ9Y5S2 1711 aa11.51□□□□□ -0.57
LAMA3-209ENST00000588164 ABCC1P33527 1531 aa11.5□□□□□ -0.57
LAMA3-209ENST00000588164 NEURL4Q96JN8 1562 aa11.5□□□□□ -0.57
LAMA3-209ENST00000588164 AFAP1Q8N556 730 aa11.5□□□□□ -0.57
LAMA3-209ENST00000588164 ZMYM3Q14202 1370 aa11.5□□□□□ -0.57
LAMA3-209ENST00000588164 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
LAMA3-209ENST00000588164 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms