RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
LINC01539-201ENST00000587904 NAIPQ13075 1403 aa13.95□□□□□ -0.18
LINC01539-201ENST00000587904 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
LINC01539-201ENST00000587904 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
LINC01539-201ENST00000587904 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
LINC01539-201ENST00000587904 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
LINC01539-201ENST00000587904 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
LINC01539-201ENST00000587904 ABCC10Q5T3U5 1492 aa13.92□□□□□ -0.18
LINC01539-201ENST00000587904 DAPK1P53355 1430 aa13.91□□□□□ -0.18
LINC01539-201ENST00000587904 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
LINC01539-201ENST00000587904 UHRF1BP1LA0JNW5 1464 aa13.91□□□□□ -0.18
LINC01539-201ENST00000587904 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
LINC01539-201ENST00000587904 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
LINC01539-201ENST00000587904 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
LINC01539-201ENST00000587904 CROCC2H7BZ55 1655 aa13.88□□□□□ -0.19
LINC01539-201ENST00000587904 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
LINC01539-201ENST00000587904 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
LINC01539-201ENST00000587904 ABCC5O15440 1437 aa13.87□□□□□ -0.19
LINC01539-201ENST00000587904 CFDP1Q9UEE9 299 aaPredicted RBP13.87□□□□□ -0.19
LINC01539-201ENST00000587904 PREX2Q70Z35 1606 aa13.85□□□□□ -0.19
LINC01539-201ENST00000587904 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
LINC01539-201ENST00000587904 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
LINC01539-201ENST00000587904 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
LINC01539-201ENST00000587904 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
LINC01539-201ENST00000587904 KDM5BQ9UGL1 1544 aa13.83□□□□□ -0.19
LINC01539-201ENST00000587904 ZCCHC11Q5TAX3 1644 aaKnown RBP13.83□□□□□ -0.2
LINC01539-201ENST00000587904 ARHGEF5Q12774 1597 aa13.82□□□□□ -0.2
LINC01539-201ENST00000587904 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
LINC01539-201ENST00000587904 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
LINC01539-201ENST00000587904 CHIC2Q9UKJ5 165 aa13.79□□□□□ -0.2
LINC01539-201ENST00000587904 MYO5CQ9NQX4 1742 aa13.79□□□□□ -0.2
LINC01539-201ENST00000587904 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
LINC01539-201ENST00000587904 KDM6BO15054 1643 aa13.78□□□□□ -0.2
LINC01539-201ENST00000587904 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
LINC01539-201ENST00000587904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC01539-201ENST00000587904 NCOA1Q15788 1441 aa13.77□□□□□ -0.2
LINC01539-201ENST00000587904 ANKRD30AQ9BXX3 1397 aa13.77□□□□□ -0.21
LINC01539-201ENST00000587904 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
LINC01539-201ENST00000587904 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
LINC01539-201ENST00000587904 TSHZ2Q9NRE2 1034 aa13.76□□□□□ -0.21
LINC01539-201ENST00000587904 CCDC141Q6ZP82 1450 aa13.75□□□□□ -0.21
LINC01539-201ENST00000587904 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
LINC01539-201ENST00000587904 C9orf84Q5VXU9 1444 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 RIMBP3CA6NJZ7 1639 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 RIMBP3BA6NNM3 1639 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 RIMBP3Q9UFD9 1639 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
LINC01539-201ENST00000587904 MAST1Q9Y2H9 1570 aa13.73□□□□□ -0.21
LINC01539-201ENST00000587904 KIAA1107Q9UPP5 1409 aa13.72□□□□□ -0.21
LINC01539-201ENST00000587904 DENND4BO75064 1496 aaPredicted RBP13.71□□□□□ -0.21
LINC01539-201ENST00000587904 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
LINC01539-201ENST00000587904 PLCH2O75038 1416 aa13.7□□□□□ -0.22
LINC01539-201ENST00000587904 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
LINC01539-201ENST00000587904 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
LINC01539-201ENST00000587904 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
LINC01539-201ENST00000587904 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
LINC01539-201ENST00000587904 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
LINC01539-201ENST00000587904 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
LINC01539-201ENST00000587904 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
LINC01539-201ENST00000587904 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
LINC01539-201ENST00000587904 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
LINC01539-201ENST00000587904 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
LINC01539-201ENST00000587904 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
LINC01539-201ENST00000587904 PZPP20742 1482 aa13.66□□□□□ -0.22
LINC01539-201ENST00000587904 ABCC1P33527 1531 aa13.66□□□□□ -0.22
LINC01539-201ENST00000587904 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
LINC01539-201ENST00000587904 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
LINC01539-201ENST00000587904 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
LINC01539-201ENST00000587904 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
LINC01539-201ENST00000587904 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
LINC01539-201ENST00000587904 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
LINC01539-201ENST00000587904 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01539-201ENST00000587904 KCNH8Q96L42 1107 aa13.62□□□□□ -0.23
LINC01539-201ENST00000587904 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
LINC01539-201ENST00000587904 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
LINC01539-201ENST00000587904 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
LINC01539-201ENST00000587904 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
LINC01539-201ENST00000587904 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
LINC01539-201ENST00000587904 UNC13BO14795 1591 aa13.59□□□□□ -0.23
LINC01539-201ENST00000587904 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
LINC01539-201ENST00000587904 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
LINC01539-201ENST00000587904 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
LINC01539-201ENST00000587904 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
LINC01539-201ENST00000587904 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
LINC01539-201ENST00000587904 EIF5BO60841 1220 aaKnown RBP13.57□□□□□ -0.24
LINC01539-201ENST00000587904 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC01539-201ENST00000587904 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
LINC01539-201ENST00000587904 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
LINC01539-201ENST00000587904 FANCAO15360 1455 aa13.56□□□□□ -0.24
LINC01539-201ENST00000587904 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
LINC01539-201ENST00000587904 NUP155O75694 1391 aa13.55□□□□□ -0.24
LINC01539-201ENST00000587904 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
LINC01539-201ENST00000587904 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
LINC01539-201ENST00000587904 MAGI2Q86UL8 1455 aa13.54□□□□□ -0.24
LINC01539-201ENST00000587904 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
LINC01539-201ENST00000587904 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
LINC01539-201ENST00000587904 INO80Q9ULG1 1556 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms