RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 KIAA0556O60303 1618 aa8.98□□□□□ -0.97
SDF2-206ENST00000587788 KIF21BO75037 1637 aa8.98□□□□□ -0.97
SDF2-206ENST00000587788 KIF13AQ9H1H9 1805 aa8.97□□□□□ -0.97
SDF2-206ENST00000587788 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
SDF2-206ENST00000587788 NPM1P06748 294 aaKnown RBP eCLIP8.94□□□□□ -0.98
SDF2-206ENST00000587788 GSE1Q14687 1217 aa8.93□□□□□ -0.98
SDF2-206ENST00000587788 SAMD9Q5K651 1589 aa8.93□□□□□ -0.98
SDF2-206ENST00000587788 CARMIL2Q6F5E8 1435 aa8.92□□□□□ -0.98
SDF2-206ENST00000587788 UBTFP17480 764 aaKnown RBP8.92□□□□□ -0.98
SDF2-206ENST00000587788 TNIKQ9UKE5 1360 aa8.91□□□□□ -0.98
SDF2-206ENST00000587788 BBXQ8WY36 941 aaPredicted RBP8.91□□□□□ -0.98
SDF2-206ENST00000587788 TTBK1Q5TCY1 1321 aaPredicted RBP8.9□□□□□ -0.98
SDF2-206ENST00000587788 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
SDF2-206ENST00000587788 ZCCHC11Q5TAX3 1644 aaKnown RBP8.9□□□□□ -0.99
SDF2-206ENST00000587788 PTPRGP23470 1445 aa8.89□□□□□ -0.99
SDF2-206ENST00000587788 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
SDF2-206ENST00000587788 ABCC2Q92887 1545 aa8.89□□□□□ -0.99
SDF2-206ENST00000587788 ABCA8O94911 1581 aa8.88□□□□□ -0.99
SDF2-206ENST00000587788 DIP2BQ9P265 1576 aa8.88□□□□□ -0.99
SDF2-206ENST00000587788 MAPKBP1O60336 1514 aa8.88□□□□□ -0.99
SDF2-206ENST00000587788 GOLGA3Q08378 1498 aa8.88□□□□□ -0.99
SDF2-206ENST00000587788 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
SDF2-206ENST00000587788 FAM212AQ96EL1 285 aa8.87□□□□□ -0.99
SDF2-206ENST00000587788 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
SDF2-206ENST00000587788 TSPOAP1O95153 1857 aa8.87□□□□□ -0.99
SDF2-206ENST00000587788 UHRF1BP1LA0JNW5 1464 aa8.86□□□□□ -0.99
SDF2-206ENST00000587788 UACAQ9BZF9 1416 aa8.85□□□□□ -0.99
SDF2-206ENST00000587788 RAPGEF6Q8TEU7 1601 aa8.84□□□□□ -0.99
SDF2-206ENST00000587788 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
SDF2-206ENST00000587788 CEP162Q5TB80 1403 aa8.84□□□□□ -0.99
SDF2-206ENST00000587788 HS6ST3Q8IZP7 471 aa8.84□□□□□ -0.99
SDF2-206ENST00000587788 EFCAB5A4FU69 1503 aa8.84□□□□□ -0.99
SDF2-206ENST00000587788 KDM5BQ9UGL1 1544 aa8.84□□□□□ -0.99
SDF2-206ENST00000587788 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
SDF2-206ENST00000587788 P3H3Q8IVL6 736 aa8.83□□□□□ -1
SDF2-206ENST00000587788 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
SDF2-206ENST00000587788 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
SDF2-206ENST00000587788 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
SDF2-206ENST00000587788 FHOD3Q2V2M9 1422 aa8.82□□□□□ -1
SDF2-206ENST00000587788 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
SDF2-206ENST00000587788 ABCC10Q5T3U5 1492 aa8.82□□□□□ -1
SDF2-206ENST00000587788 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
SDF2-206ENST00000587788 ASXL2Q76L83 1435 aa8.8□□□□□ -1
SDF2-206ENST00000587788 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
SDF2-206ENST00000587788 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
SDF2-206ENST00000587788 ARHGAP35Q9NRY4 1499 aa8.8□□□□□ -1
SDF2-206ENST00000587788 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
SDF2-206ENST00000587788 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
SDF2-206ENST00000587788 CHADLQ6NUI6 762 aa8.78□□□□□ -1
SDF2-206ENST00000587788 GLI2P10070 1586 aa8.78□□□□□ -1
SDF2-206ENST00000587788 NUP153P49790 1475 aaKnown RBP8.77□□□□□ -1
SDF2-206ENST00000587788 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
SDF2-206ENST00000587788 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
SDF2-206ENST00000587788 ATP10BO94823 1461 aa8.77□□□□□ -1.01
SDF2-206ENST00000587788 WDR7Q9Y4E6 1490 aa8.77□□□□□ -1.01
SDF2-206ENST00000587788 EPRSP07814 1512 aaKnown RBP8.76□□□□□ -1.01
SDF2-206ENST00000587788 CFAP43Q8NDM7 1665 aa8.76□□□□□ -1.01
SDF2-206ENST00000587788 SGIP1Q9BQI5 828 aa8.76□□□□□ -1.01
SDF2-206ENST00000587788 PCF11O94913 1555 aaKnown RBP8.75□□□□□ -1.01
SDF2-206ENST00000587788 ARID3CA6NKF2 412 aa8.75□□□□□ -1.01
SDF2-206ENST00000587788 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
SDF2-206ENST00000587788 VSIG10Q8N0Z9 540 aa8.75□□□□□ -1.01
SDF2-206ENST00000587788 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
SDF2-206ENST00000587788 CDK13Q14004 1512 aaKnown RBP8.75□□□□□ -1.01
SDF2-206ENST00000587788 HECW1Q76N89 1606 aa8.74□□□□□ -1.01
SDF2-206ENST00000587788 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
SDF2-206ENST00000587788 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
SDF2-206ENST00000587788 CLIP1P30622 1438 aa8.73□□□□□ -1.01
SDF2-206ENST00000587788 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
SDF2-206ENST00000587788 KDM6BO15054 1643 aa8.72□□□□□ -1.01
SDF2-206ENST00000587788 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
SDF2-206ENST00000587788 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
SDF2-206ENST00000587788 PYGBP11216 843 aa8.71□□□□□ -1.02
SDF2-206ENST00000587788 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
SDF2-206ENST00000587788 TTC37Q6PGP7 1564 aa8.7□□□□□ -1.02
SDF2-206ENST00000587788 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
SDF2-206ENST00000587788 FMN1Q68DA7 1419 aa8.7□□□□□ -1.02
SDF2-206ENST00000587788 VPS8Q8N3P4 1428 aa8.69□□□□□ -1.02
SDF2-206ENST00000587788 KIF14Q15058 1648 aa8.69□□□□□ -1.02
SDF2-206ENST00000587788 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
SDF2-206ENST00000587788 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
SDF2-206ENST00000587788 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
SDF2-206ENST00000587788 MAGI3Q5TCQ9 1506 aa8.67□□□□□ -1.02
SDF2-206ENST00000587788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.67□□□□□ -1.02
SDF2-206ENST00000587788 KCNH8Q96L42 1107 aa8.67□□□□□ -1.02
SDF2-206ENST00000587788 MYO5CQ9NQX4 1742 aa8.67□□□□□ -1.02
SDF2-206ENST00000587788 FYCO1Q9BQS8 1478 aa8.66□□□□□ -1.02
SDF2-206ENST00000587788 COL17A1Q9UMD9 1497 aaPredicted RBP8.66□□□□□ -1.02
SDF2-206ENST00000587788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
SDF2-206ENST00000587788 STK25O00506 426 aa8.66□□□□□ -1.02
SDF2-206ENST00000587788 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
SDF2-206ENST00000587788 ZFP91Q96JP5 570 aaPredicted RBP8.66□□□□□ -1.02
SDF2-206ENST00000587788 TSPYL2Q9H2G4 693 aaPredicted RBP8.66□□□□□ -1.02
SDF2-206ENST00000587788 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
SDF2-206ENST00000587788 CD109Q6YHK3 1445 aa8.65□□□□□ -1.02
SDF2-206ENST00000587788 CASKIN1Q8WXD9 1431 aa8.65□□□□□ -1.02
SDF2-206ENST00000587788 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
SDF2-206ENST00000587788 CDC42BPAQ5VT25 1732 aa8.64□□□□□ -1.03
SDF2-206ENST00000587788 CDC42BPBQ9Y5S2 1711 aa8.64□□□□□ -1.03
SDF2-206ENST00000587788 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms