RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PLCH2O75038 1416 aa25.99■■□□□ 1.75
NCLN-203ENST00000587740 SCAPERQ9BY12 1400 aa25.99■■□□□ 1.75
NCLN-203ENST00000587740 FER1L4A9Z1Z3 1794 aa25.95■■□□□ 1.75
NCLN-203ENST00000587740 CERKQ8TCT0 537 aa25.92■■□□□ 1.74
NCLN-203ENST00000587740 ARHGEF12Q9NZN5 1544 aa25.91■■□□□ 1.74
NCLN-203ENST00000587740 ATP10AO60312 1499 aa25.91■■□□□ 1.74
NCLN-203ENST00000587740 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
NCLN-203ENST00000587740 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
NCLN-203ENST00000587740 CEBPAP49715 358 aaPredicted RBP25.86■■□□□ 1.73
NCLN-203ENST00000587740 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
NCLN-203ENST00000587740 MYO5CQ9NQX4 1742 aa25.84■■□□□ 1.73
NCLN-203ENST00000587740 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
NCLN-203ENST00000587740 KIF14Q15058 1648 aa25.82■■□□□ 1.72
NCLN-203ENST00000587740 ARHGAP35Q9NRY4 1499 aa25.81■■□□□ 1.72
NCLN-203ENST00000587740 PREX1Q8TCU6 1659 aa25.8■■□□□ 1.72
NCLN-203ENST00000587740 FMN1Q68DA7 1419 aa25.8■■□□□ 1.72
NCLN-203ENST00000587740 AFAP1Q8N556 730 aa25.8■■□□□ 1.72
NCLN-203ENST00000587740 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
NCLN-203ENST00000587740 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
NCLN-203ENST00000587740 ZNF518AQ6AHZ1 1483 aa25.77■■□□□ 1.72
NCLN-203ENST00000587740 KDM5CP41229 1560 aa25.77■■□□□ 1.72
NCLN-203ENST00000587740 TROQ12816 1431 aaPredicted RBP25.76■■□□□ 1.71
NCLN-203ENST00000587740 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
NCLN-203ENST00000587740 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
NCLN-203ENST00000587740 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
NCLN-203ENST00000587740 DIP2CQ9Y2E4 1556 aa25.72■■□□□ 1.71
NCLN-203ENST00000587740 LRRIQ1Q96JM4 1722 aa25.71■■□□□ 1.71
NCLN-203ENST00000587740 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
NCLN-203ENST00000587740 UHRF1BP1Q6BDS2 1440 aa25.68■■□□□ 1.7
NCLN-203ENST00000587740 REREQ9P2R6 1566 aa25.67■■□□□ 1.7
NCLN-203ENST00000587740 MYT1LQ9UL68 1186 aa25.67■■□□□ 1.7
NCLN-203ENST00000587740 DMRT2Q9Y5R5 561 aa25.67■■□□□ 1.7
NCLN-203ENST00000587740 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
NCLN-203ENST00000587740 CLIP1P30622 1438 aa25.66■■□□□ 1.7
NCLN-203ENST00000587740 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
NCLN-203ENST00000587740 TRAPPC8Q9Y2L5 1435 aa25.64■■□□□ 1.7
NCLN-203ENST00000587740 C3P01024 1663 aa25.63■■□□□ 1.69
NCLN-203ENST00000587740 AGLP35573 1532 aa25.61■■□□□ 1.69
NCLN-203ENST00000587740 ILDR2Q71H61 639 aa25.6■■□□□ 1.69
NCLN-203ENST00000587740 ABCC1P33527 1531 aa25.59■■□□□ 1.69
NCLN-203ENST00000587740 PTPRTO14522 1441 aa25.58■■□□□ 1.69
NCLN-203ENST00000587740 PREX2Q70Z35 1606 aa25.58■■□□□ 1.69
NCLN-203ENST00000587740 DISP3Q9P2K9 1392 aa25.56■■□□□ 1.68
NCLN-203ENST00000587740 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
NCLN-203ENST00000587740 KIDINS220Q9ULH0 1771 aa25.55■■□□□ 1.68
NCLN-203ENST00000587740 ESF1Q9H501 851 aaKnown RBP25.52■■□□□ 1.68
NCLN-203ENST00000587740 CASKIN1Q8WXD9 1431 aa25.52■■□□□ 1.68
NCLN-203ENST00000587740 LTBP4Q8N2S1 1624 aa25.52■■□□□ 1.68
NCLN-203ENST00000587740 CDC42BPAQ5VT25 1732 aa25.5■■□□□ 1.67
NCLN-203ENST00000587740 CCDC18Q5T9S5 1454 aa25.48■■□□□ 1.67
NCLN-203ENST00000587740 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
NCLN-203ENST00000587740 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
NCLN-203ENST00000587740 SAMD9LQ8IVG5 1584 aa25.46■■□□□ 1.67
NCLN-203ENST00000587740 SOCS7O14512 581 aa25.44■■□□□ 1.66
NCLN-203ENST00000587740 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
NCLN-203ENST00000587740 ZMYM3Q14202 1370 aa25.41■■□□□ 1.66
NCLN-203ENST00000587740 NPATQ14207 1427 aa25.4■■□□□ 1.66
NCLN-203ENST00000587740 SYCP2Q9BX26 1530 aa25.4■■□□□ 1.66
NCLN-203ENST00000587740 CAMSAP1Q5T5Y3 1602 aa25.4■■□□□ 1.66
NCLN-203ENST00000587740 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
NCLN-203ENST00000587740 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.66
NCLN-203ENST00000587740 HNRNPMP52272 730 aaKnown RBP eCLIP25.39■■□□□ 1.667e-10■■■□□ 18.3
NCLN-203ENST00000587740 IQSEC2Q5JU85 1478 aa25.39■■□□□ 1.65
NCLN-203ENST00000587740 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
NCLN-203ENST00000587740 SPATA31D1Q6ZQQ2 1576 aa25.37■■□□□ 1.65
NCLN-203ENST00000587740 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
NCLN-203ENST00000587740 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
NCLN-203ENST00000587740 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
NCLN-203ENST00000587740 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
NCLN-203ENST00000587740 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
NCLN-203ENST00000587740 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
NCLN-203ENST00000587740 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
NCLN-203ENST00000587740 KIAA1107Q9UPP5 1409 aa25.3■■□□□ 1.64
NCLN-203ENST00000587740 INO80Q9ULG1 1556 aaPredicted RBP25.3■■□□□ 1.64
NCLN-203ENST00000587740 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
NCLN-203ENST00000587740 A2MP01023 1474 aa25.29■■□□□ 1.64
NCLN-203ENST00000587740 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
NCLN-203ENST00000587740 MYO3AQ8NEV4 1616 aa25.26■■□□□ 1.63
NCLN-203ENST00000587740 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
NCLN-203ENST00000587740 GGT6Q6P531 493 aa25.26■■□□□ 1.63
NCLN-203ENST00000587740 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
NCLN-203ENST00000587740 CEP170BQ9Y4F5 1589 aaPredicted RBP25.24■■□□□ 1.63
NCLN-203ENST00000587740 TCOF1Q13428 1488 aaKnown RBP25.24■■□□□ 1.63
NCLN-203ENST00000587740 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
NCLN-203ENST00000587740 PKD2Q13563 968 aa25.24■■□□□ 1.63
NCLN-203ENST00000587740 CCNB3Q8WWL7 1395 aa25.23■■□□□ 1.63
NCLN-203ENST00000587740 UBAP1LF5GYI3 381 aa25.22■■□□□ 1.63
NCLN-203ENST00000587740 ZNF644Q9H582 1327 aaPredicted RBP25.21■■□□□ 1.63
NCLN-203ENST00000587740 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
NCLN-203ENST00000587740 MBD5Q9P267 1494 aa25.16■■□□□ 1.62
NCLN-203ENST00000587740 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
NCLN-203ENST00000587740 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
NCLN-203ENST00000587740 A2ML1A8K2U0 1454 aa25.13■■□□□ 1.61
NCLN-203ENST00000587740 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
NCLN-203ENST00000587740 DNMT1P26358 1616 aaKnown RBP25.12■■□□□ 1.61
NCLN-203ENST00000587740 DHX29Q7Z478 1369 aaKnown RBP25.09■■□□□ 1.61
NCLN-203ENST00000587740 FBXO31Q5XUX0 539 aaPredicted RBP25.09■■□□□ 1.61
NCLN-203ENST00000587740 RTEL1-TNFRSF6BF6WH68 1400 aa25.09■■□□□ 1.61
NCLN-203ENST00000587740 LOC105371045A0A1W2PR82 267 aa25.07■■□□□ 1.6
NCLN-203ENST00000587740 NEURL4Q96JN8 1562 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms