RNA–Protein interactions for RNA: ENST00000587633.1

TRMT1-209, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-209ENST00000587633 ATP1B4Q9UN42 357 aaPredicted RBP29.41■■■□□ 2.3
TRMT1-209ENST00000587633 HECW1Q76N89 1606 aa29.4■■■□□ 2.3
TRMT1-209ENST00000587633 PLPPR3Q6T4P5 718 aa29.38■■■□□ 2.29
TRMT1-209ENST00000587633 HSPA2P54652 639 aa29.37■■■□□ 2.29
TRMT1-209ENST00000587633 MLECQ14165 292 aa29.37■■■□□ 2.29
TRMT1-209ENST00000587633 SIGLEC1Q9BZZ2 1709 aa29.34■■■□□ 2.29
TRMT1-209ENST00000587633 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
TRMT1-209ENST00000587633 ATP10AO60312 1499 aa29.34■■■□□ 2.29
TRMT1-209ENST00000587633 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
TRMT1-209ENST00000587633 C9orf84Q5VXU9 1444 aa29.28■■■□□ 2.28
TRMT1-209ENST00000587633 MYO5CQ9NQX4 1742 aa29.27■■■□□ 2.28
TRMT1-209ENST00000587633 TROQ12816 1431 aaPredicted RBP29.26■■■□□ 2.27
TRMT1-209ENST00000587633 FER1L4A9Z1Z3 1794 aa29.25■■■□□ 2.27
TRMT1-209ENST00000587633 ARHGEF12Q9NZN5 1544 aa29.25■■■□□ 2.27
TRMT1-209ENST00000587633 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
TRMT1-209ENST00000587633 CLIP1P30622 1438 aa29.22■■■□□ 2.27
TRMT1-209ENST00000587633 AFAP1Q8N556 730 aa29.22■■■□□ 2.27
TRMT1-209ENST00000587633 KIF14Q15058 1648 aa29.21■■■□□ 2.27
TRMT1-209ENST00000587633 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
TRMT1-209ENST00000587633 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
TRMT1-209ENST00000587633 CERKQ8TCT0 537 aa29.17■■■□□ 2.26
TRMT1-209ENST00000587633 CEBPAP49715 358 aaPredicted RBP29.16■■■□□ 2.26
TRMT1-209ENST00000587633 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
TRMT1-209ENST00000587633 KDM5CP41229 1560 aa29.15■■■□□ 2.26
TRMT1-209ENST00000587633 DMRT2Q9Y5R5 561 aa29.1■■■□□ 2.25
TRMT1-209ENST00000587633 PREX1Q8TCU6 1659 aa29.09■■■□□ 2.25
TRMT1-209ENST00000587633 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
TRMT1-209ENST00000587633 SETD1BQ9UPS6 1966 aaKnown RBP29.07■■■□□ 2.24
TRMT1-209ENST00000587633 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
TRMT1-209ENST00000587633 REREQ9P2R6 1566 aa29.06■■■□□ 2.24
TRMT1-209ENST00000587633 CASKIN1Q8WXD9 1431 aa29.05■■■□□ 2.24
TRMT1-209ENST00000587633 CDC42BPBQ9Y5S2 1711 aa29.05■■■□□ 2.24
TRMT1-209ENST00000587633 DIP2CQ9Y2E4 1556 aa29.05■■■□□ 2.24
TRMT1-209ENST00000587633 CCDC18Q5T9S5 1454 aa29.04■■■□□ 2.24
TRMT1-209ENST00000587633 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
TRMT1-209ENST00000587633 TRAPPC8Q9Y2L5 1435 aa29.02■■■□□ 2.24
TRMT1-209ENST00000587633 ESF1Q9H501 851 aaKnown RBP29.01■■■□□ 2.23
TRMT1-209ENST00000587633 AGLP35573 1532 aa28.99■■■□□ 2.23
TRMT1-209ENST00000587633 PREX2Q70Z35 1606 aa28.98■■■□□ 2.23
TRMT1-209ENST00000587633 ABCC1P33527 1531 aa28.98■■■□□ 2.23
TRMT1-209ENST00000587633 ABCA6Q8N139 1617 aa28.97■■■□□ 2.23
TRMT1-209ENST00000587633 STRCQ7RTU9 1775 aa28.94■■■□□ 2.22
TRMT1-209ENST00000587633 ITSN2Q9NZM3 1697 aa28.9■■■□□ 2.22
TRMT1-209ENST00000587633 CNTLNQ9NXG0 1405 aa28.9■■■□□ 2.22
TRMT1-209ENST00000587633 C3P01024 1663 aa28.89■■■□□ 2.22
TRMT1-209ENST00000587633 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
TRMT1-209ENST00000587633 ZNF777Q9ULD5 760 aaPredicted RBP28.88■■■□□ 2.21
TRMT1-209ENST00000587633 FYCO1Q9BQS8 1478 aa28.88■■■□□ 2.21
TRMT1-209ENST00000587633 PTPRTO14522 1441 aa28.87■■■□□ 2.21
TRMT1-209ENST00000587633 CDC42BPAQ5VT25 1732 aa28.87■■■□□ 2.21
TRMT1-209ENST00000587633 SPAG9O60271 1321 aaKnown RBP28.83■■■□□ 2.21
TRMT1-209ENST00000587633 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
TRMT1-209ENST00000587633 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
TRMT1-209ENST00000587633 HNRNPMP52272 730 aaKnown RBP eCLIP28.81■■■□□ 2.2
TRMT1-209ENST00000587633 CFDP1Q9UEE9 299 aaPredicted RBP28.78■■■□□ 2.2
TRMT1-209ENST00000587633 NPATQ14207 1427 aa28.77■■■□□ 2.2
TRMT1-209ENST00000587633 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
TRMT1-209ENST00000587633 ZMYM3Q14202 1370 aa28.77■■■□□ 2.2
TRMT1-209ENST00000587633 SYCP2Q9BX26 1530 aa28.76■■■□□ 2.19
TRMT1-209ENST00000587633 PLEKHH2Q8IVE3 1493 aa28.75■■■□□ 2.19
TRMT1-209ENST00000587633 NCOA1Q15788 1441 aa28.75■■■□□ 2.19
TRMT1-209ENST00000587633 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
TRMT1-209ENST00000587633 MROH2AA6NES4 1674 aa28.71■■■□□ 2.19
TRMT1-209ENST00000587633 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
TRMT1-209ENST00000587633 LTBP4Q8N2S1 1624 aa28.68■■■□□ 2.18
TRMT1-209ENST00000587633 A2MP01023 1474 aa28.67■■■□□ 2.18
TRMT1-209ENST00000587633 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
TRMT1-209ENST00000587633 PPP6R1Q9UPN7 881 aa28.67■■■□□ 2.18
TRMT1-209ENST00000587633 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
TRMT1-209ENST00000587633 DISP3Q9P2K9 1392 aa28.66■■■□□ 2.18
TRMT1-209ENST00000587633 IQSEC2Q5JU85 1478 aa28.66■■■□□ 2.18
TRMT1-209ENST00000587633 GGT6Q6P531 493 aa28.65■■■□□ 2.18
TRMT1-209ENST00000587633 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
TRMT1-209ENST00000587633 PLXNC1O60486 1568 aa28.63■■■□□ 2.17
TRMT1-209ENST00000587633 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
TRMT1-209ENST00000587633 PKD2Q13563 968 aa28.61■■■□□ 2.17
TRMT1-209ENST00000587633 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
TRMT1-209ENST00000587633 PTPRKQ15262 1439 aa28.59■■■□□ 2.17
TRMT1-209ENST00000587633 CLTCQ00610 1675 aaKnown RBP28.58■■■□□ 2.17
TRMT1-209ENST00000587633 ZNF644Q9H582 1327 aaPredicted RBP28.58■■■□□ 2.17
TRMT1-209ENST00000587633 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
TRMT1-209ENST00000587633 PLA2R1Q13018 1463 aa28.55■■■□□ 2.16
TRMT1-209ENST00000587633 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
TRMT1-209ENST00000587633 RTEL1-TNFRSF6BF6WH68 1400 aa28.53■■■□□ 2.16
TRMT1-209ENST00000587633 ADGBQ8N7X0 1667 aa28.52■■■□□ 2.16
TRMT1-209ENST00000587633 ZNF335Q9H4Z2 1342 aaPredicted RBP28.52■■■□□ 2.16
TRMT1-209ENST00000587633 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
TRMT1-209ENST00000587633 MYO3AQ8NEV4 1616 aa28.51■■■□□ 2.15
TRMT1-209ENST00000587633 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
TRMT1-209ENST00000587633 TCOF1Q13428 1488 aaKnown RBP28.5■■■□□ 2.15
TRMT1-209ENST00000587633 CEP170BQ9Y4F5 1589 aaPredicted RBP28.5■■■□□ 2.15
TRMT1-209ENST00000587633 DHX29Q7Z478 1369 aaKnown RBP28.5■■■□□ 2.15
TRMT1-209ENST00000587633 SOCS7O14512 581 aa28.49■■■□□ 2.15
TRMT1-209ENST00000587633 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
TRMT1-209ENST00000587633 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
TRMT1-209ENST00000587633 RSPH4AQ5TD94 716 aa28.46■■■□□ 2.15
TRMT1-209ENST00000587633 UBAP1LF5GYI3 381 aa28.44■■■□□ 2.14
TRMT1-209ENST00000587633 A2ML1A8K2U0 1454 aa28.42■■■□□ 2.14
TRMT1-209ENST00000587633 KIF3BO15066 747 aa28.42■■■□□ 2.14
TRMT1-209ENST00000587633 SPATA31D1Q6ZQQ2 1576 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms