RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	ZNF644	Q9H582	1327 aa	Predicted RBP	32.7	■■■□□ 2.82
CIRBP-208	ENST00000586548	ROCK1	Q13464	1354 aa		32.69	■■■□□ 2.82
CIRBP-208	ENST00000586548	CHIC2	Q9UKJ5	165 aa		32.66	■■■□□ 2.82
CIRBP-208	ENST00000586548	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.64	■■■□□ 2.82
CIRBP-208	ENST00000586548	KDM5B	Q9UGL1	1544 aa		32.64	■■■□□ 2.82
CIRBP-208	ENST00000586548	CROCC2	H7BZ55	1655 aa		32.63	■■■□□ 2.81
CIRBP-208	ENST00000586548	RRP7BP	Q9NSQ0	103 aa		32.63	■■■□□ 2.81
CIRBP-208	ENST00000586548	PREX2	Q70Z35	1606 aa		32.6	■■■□□ 2.81
CIRBP-208	ENST00000586548	ADGB	Q8N7X0	1667 aa		32.59	■■■□□ 2.81
CIRBP-208	ENST00000586548	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.55	■■■□□ 2.8
CIRBP-208	ENST00000586548	CDC42BPB	Q9Y5S2	1711 aa		32.55	■■■□□ 2.8
CIRBP-208	ENST00000586548	KDM6B	O15054	1643 aa		32.54	■■■□□ 2.8
CIRBP-208	ENST00000586548	TTC37	Q6PGP7	1564 aa		32.54	■■■□□ 2.8
CIRBP-208	ENST00000586548	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
CIRBP-208	ENST00000586548	ACIN1	Q9UKV3	1341 aa	Known RBP	32.53	■■■□□ 2.8
CIRBP-208	ENST00000586548	ADGRL2	O95490	1459 aa		32.53	■■■□□ 2.8
CIRBP-208	ENST00000586548	SHANK2	Q9UPX8	1470 aa		32.5	■■■□□ 2.79
CIRBP-208	ENST00000586548	ARHGEF5	Q12774	1597 aa		32.49	■■■□□ 2.79
CIRBP-208	ENST00000586548	MYO5C	Q9NQX4	1742 aa		32.48	■■■□□ 2.79
CIRBP-208	ENST00000586548	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.47	■■■□□ 2.79
CIRBP-208	ENST00000586548	SAMD9L	Q8IVG5	1584 aa		32.46	■■■□□ 2.79
CIRBP-208	ENST00000586548	NCOA1	Q15788	1441 aa		32.45	■■■□□ 2.79
CIRBP-208	ENST00000586548	TIMELESS	Q9UNS1	1208 aa		32.41	■■■□□ 2.78
CIRBP-208	ENST00000586548	ARHGAP5	Q13017	1502 aa		32.4	■■■□□ 2.78
CIRBP-208	ENST00000586548	ANKRD30A	Q9BXX3	1397 aa		32.4	■■■□□ 2.78
CIRBP-208	ENST00000586548	MBD5	Q9P267	1494 aa		32.39	■■■□□ 2.78
CIRBP-208	ENST00000586548	SIN3A	Q96ST3	1273 aa		32.38	■■■□□ 2.77
CIRBP-208	ENST00000586548	C9orf84	Q5VXU9	1444 aa		32.37	■■■□□ 2.77
CIRBP-208	ENST00000586548	TRIM52	Q96A61	297 aa		32.35	■■■□□ 2.77
CIRBP-208	ENST00000586548	CCDC141	Q6ZP82	1450 aa		32.35	■■■□□ 2.77
CIRBP-208	ENST00000586548	KCNH8	Q96L42	1107 aa		32.34	■■■□□ 2.77
CIRBP-208	ENST00000586548	PLEKHH2	Q8IVE3	1493 aa		32.34	■■■□□ 2.77
CIRBP-208	ENST00000586548	RSPH4A	Q5TD94	716 aa		32.33	■■■□□ 2.77
CIRBP-208	ENST00000586548	WDR7	Q9Y4E6	1490 aa		32.33	■■■□□ 2.77
CIRBP-208	ENST00000586548	DENND4B	O75064	1496 aa	Predicted RBP	32.32	■■■□□ 2.76
CIRBP-208	ENST00000586548	PLCH2	O75038	1416 aa		32.32	■■■□□ 2.76
CIRBP-208	ENST00000586548	NEUROD1	Q13562	356 aa		32.31	■■■□□ 2.76
CIRBP-208	ENST00000586548	SYCP2	Q9BX26	1530 aa		32.29	■■■□□ 2.76
CIRBP-208	ENST00000586548	TSPY4	P0CV99	314 aa		32.29	■■■□□ 2.76
CIRBP-208	ENST00000586548	TSPY10	P0CW01	314 aa		32.29	■■■□□ 2.76
CIRBP-208	ENST00000586548	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
CIRBP-208	ENST00000586548	KIAA1107	Q9UPP5	1409 aa		32.29	■■■□□ 2.76
CIRBP-208	ENST00000586548	ARAP3	Q8WWN8	1544 aa		32.28	■■■□□ 2.76
CIRBP-208	ENST00000586548	MPHOSPH9	Q99550	1183 aa		32.26	■■■□□ 2.76
CIRBP-208	ENST00000586548	MAST1	Q9Y2H9	1570 aa		32.26	■■■□□ 2.76
CIRBP-208	ENST00000586548	ANKRD50	Q9ULJ7	1429 aa		32.24	■■■□□ 2.75
CIRBP-208	ENST00000586548	DIEXF	Q68CQ4	756 aa	Known RBP	32.23	■■■□□ 2.75
CIRBP-208	ENST00000586548	ABCA9	Q8IUA7	1624 aa		32.19	■■■□□ 2.74
CIRBP-208	ENST00000586548	EFCAB2	Q5VUJ9	269 aa		32.19	■■■□□ 2.74
CIRBP-208	ENST00000586548	ASXL2	Q76L83	1435 aa		32.18	■■■□□ 2.74
CIRBP-208	ENST00000586548	TONSL	Q96HA7	1378 aa		32.18	■■■□□ 2.74
CIRBP-208	ENST00000586548	KIF15	Q9NS87	1388 aa		32.17	■■■□□ 2.74
CIRBP-208	ENST00000586548	ABCC1	P33527	1531 aa		32.17	■■■□□ 2.74
CIRBP-208	ENST00000586548	PZP	P20742	1482 aa		32.17	■■■□□ 2.74
CIRBP-208	ENST00000586548	DNAJC5	Q9H3Z4	198 aa		32.17	■■■□□ 2.74
CIRBP-208	ENST00000586548	ARHGEF12	Q9NZN5	1544 aa		32.13	■■■□□ 2.73
CIRBP-208	ENST00000586548	PLXNC1	O60486	1568 aa		32.13	■■■□□ 2.73
CIRBP-208	ENST00000586548	PPP1R15A	O75807	674 aa	Predicted RBP	32.12	■■■□□ 2.73
CIRBP-208	ENST00000586548	RIMBP3C	A6NJZ7	1639 aa		32.12	■■■□□ 2.73
CIRBP-208	ENST00000586548	RIMBP3B	A6NNM3	1639 aa		32.12	■■■□□ 2.73
CIRBP-208	ENST00000586548	RIMBP3	Q9UFD9	1639 aa		32.12	■■■□□ 2.73
CIRBP-208	ENST00000586548	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.11	■■■□□ 2.73
CIRBP-208	ENST00000586548	KDM5D	Q9BY66	1539 aa		32.1	■■■□□ 2.73
CIRBP-208	ENST00000586548	NPM1	P06748	294 aa	Known RBP eCLIP	32.1	■■■□□ 2.73
CIRBP-208	ENST00000586548	ANKRD30B	Q9BXX2	1392 aa		32.08	■■■□□ 2.73
CIRBP-208	ENST00000586548	FANCA	O15360	1455 aa		32	■■■□□ 2.71
CIRBP-208	ENST00000586548	FOXD1	Q16676	465 aa		32	■■■□□ 2.71
CIRBP-208	ENST00000586548	RPRD2	Q5VT52	1461 aa	Known RBP	31.99	■■■□□ 2.71
CIRBP-208	ENST00000586548	TRAPPC8	Q9Y2L5	1435 aa		31.99	■■■□□ 2.71
CIRBP-208	ENST00000586548	NUP155	O75694	1391 aa		31.98	■■■□□ 2.71
CIRBP-208	ENST00000586548	DUOX2	Q9NRD8	1548 aa		31.98	■■■□□ 2.71
CIRBP-208	ENST00000586548	UNC13B	O14795	1591 aa		31.95	■■■□□ 2.71
CIRBP-208	ENST00000586548	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.94	■■■□□ 2.7
CIRBP-208	ENST00000586548	CYB5RL	Q6IPT4	315 aa		31.93	■■■□□ 2.7
CIRBP-208	ENST00000586548	ERBIN	Q96RT1	1412 aa		31.91	■■■□□ 2.7
CIRBP-208	ENST00000586548	PKD2	Q13563	968 aa		31.9	■■■□□ 2.7
CIRBP-208	ENST00000586548	ZFYVE16	Q7Z3T8	1539 aa		31.89	■■■□□ 2.7
CIRBP-208	ENST00000586548	ADGRL1	O94910	1474 aa		31.88	■■■□□ 2.69
CIRBP-208	ENST00000586548	FAM135A	Q9P2D6	1515 aa		31.87	■■■□□ 2.69
CIRBP-208	ENST00000586548	CFAP74	Q9C0B2	1584 aa		31.87	■■■□□ 2.69
CIRBP-208	ENST00000586548	SPAG9	O60271	1321 aa	Known RBP	31.86	■■■□□ 2.69
CIRBP-208	ENST00000586548	TEX14	Q8IWB6	1497 aa		31.86	■■■□□ 2.69
CIRBP-208	ENST00000586548	INO80	Q9ULG1	1556 aa	Predicted RBP	31.84	■■■□□ 2.69
CIRBP-208	ENST00000586548	MAGI2	Q86UL8	1455 aa		31.82	■■■□□ 2.69
CIRBP-208	ENST00000586548	SCAPER	Q9BY12	1400 aa		31.82	■■■□□ 2.68
CIRBP-208	ENST00000586548	IQGAP3	Q86VI3	1631 aa		31.82	■■■□□ 2.68
CIRBP-208	ENST00000586548	CD109	Q6YHK3	1445 aa		31.82	■■■□□ 2.68
CIRBP-208	ENST00000586548	ATP7A	Q04656	1500 aa		31.81	■■■□□ 2.68
CIRBP-208	ENST00000586548	AFAP1	Q8N556	730 aa		31.8	■■■□□ 2.68
CIRBP-208	ENST00000586548	L3MBTL2	Q969R5	705 aa		31.8	■■■□□ 2.68
CIRBP-208	ENST00000586548	ZNF518A	Q6AHZ1	1483 aa		31.72	■■■□□ 2.67
CIRBP-208	ENST00000586548	DEPDC5	O75140	1603 aa		31.67	■■■□□ 2.66
CIRBP-208	ENST00000586548	NEO1	Q92859	1461 aa		31.66	■■■□□ 2.66
CIRBP-208	ENST00000586548	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	GLI2	P10070	1586 aa		31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	KIDINS220	Q9ULH0	1771 aa		31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	MAP3K4	Q9Y6R4	1608 aa		31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	KDM5C	P41229	1560 aa		31.65	■■■□□ 2.66
CIRBP-208	ENST00000586548	MIER1	Q8N108	512 aa		31.64	■■■□□ 2.66

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