RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
SF3A2-202ENST00000586396 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
SF3A2-202ENST00000586396 MLECQ14165 292 aa25.03■■□□□ 1.6
SF3A2-202ENST00000586396 PLCH2O75038 1416 aa25.03■■□□□ 1.6
SF3A2-202ENST00000586396 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
SF3A2-202ENST00000586396 KIF14Q15058 1648 aa24.99■■□□□ 1.59
SF3A2-202ENST00000586396 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
SF3A2-202ENST00000586396 ATP10AO60312 1499 aa24.97■■□□□ 1.59
SF3A2-202ENST00000586396 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
SF3A2-202ENST00000586396 FMN1Q68DA7 1419 aa24.95■■□□□ 1.59
SF3A2-202ENST00000586396 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
SF3A2-202ENST00000586396 ATP1B4Q9UN42 357 aaPredicted RBP24.92■■□□□ 1.58
SF3A2-202ENST00000586396 KDM5CP41229 1560 aa24.92■■□□□ 1.58
SF3A2-202ENST00000586396 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
SF3A2-202ENST00000586396 CERKQ8TCT0 537 aa24.9■■□□□ 1.58
SF3A2-202ENST00000586396 EFCAB2Q5VUJ9 269 aa24.89■■□□□ 1.58
SF3A2-202ENST00000586396 LRRIQ1Q96JM4 1722 aa24.88■■□□□ 1.57
SF3A2-202ENST00000586396 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
SF3A2-202ENST00000586396 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
SF3A2-202ENST00000586396 DIP2CQ9Y2E4 1556 aa24.87■■□□□ 1.57
SF3A2-202ENST00000586396 CLIP1P30622 1438 aa24.86■■□□□ 1.57
SF3A2-202ENST00000586396 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
SF3A2-202ENST00000586396 TROQ12816 1431 aaPredicted RBP24.85■■□□□ 1.57
SF3A2-202ENST00000586396 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
SF3A2-202ENST00000586396 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
SF3A2-202ENST00000586396 CDC42BPBQ9Y5S2 1711 aa24.83■■□□□ 1.57
SF3A2-202ENST00000586396 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
SF3A2-202ENST00000586396 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
SF3A2-202ENST00000586396 UHRF1BP1Q6BDS2 1440 aa24.83■■□□□ 1.57
SF3A2-202ENST00000586396 CEBPAP49715 358 aaPredicted RBP24.81■■□□□ 1.56
SF3A2-202ENST00000586396 PREX2Q70Z35 1606 aa24.81■■□□□ 1.56
SF3A2-202ENST00000586396 C3P01024 1663 aa24.81■■□□□ 1.56
SF3A2-202ENST00000586396 MYT1LQ9UL68 1186 aa24.79■■□□□ 1.56
SF3A2-202ENST00000586396 SETD1BQ9UPS6 1966 aaKnown RBP24.79■■□□□ 1.56
SF3A2-202ENST00000586396 ITSN2Q9NZM3 1697 aa24.78■■□□□ 1.56
SF3A2-202ENST00000586396 AFAP1Q8N556 730 aa24.77■■□□□ 1.56
SF3A2-202ENST00000586396 ABCC1P33527 1531 aa24.76■■□□□ 1.55
SF3A2-202ENST00000586396 DMRT2Q9Y5R5 561 aa24.74■■□□□ 1.55
SF3A2-202ENST00000586396 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
SF3A2-202ENST00000586396 AGLP35573 1532 aa24.71■■□□□ 1.55
SF3A2-202ENST00000586396 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.55
SF3A2-202ENST00000586396 CDC42BPAQ5VT25 1732 aa24.69■■□□□ 1.54
SF3A2-202ENST00000586396 KIDINS220Q9ULH0 1771 aa24.69■■□□□ 1.54
SF3A2-202ENST00000586396 TRAPPC8Q9Y2L5 1435 aa24.68■■□□□ 1.54
SF3A2-202ENST00000586396 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
SF3A2-202ENST00000586396 PTPRTO14522 1441 aa24.65■■□□□ 1.54
SF3A2-202ENST00000586396 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
SF3A2-202ENST00000586396 MROH2AA6NES4 1674 aa24.63■■□□□ 1.53
SF3A2-202ENST00000586396 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
SF3A2-202ENST00000586396 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
SF3A2-202ENST00000586396 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
SF3A2-202ENST00000586396 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
SF3A2-202ENST00000586396 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
SF3A2-202ENST00000586396 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
SF3A2-202ENST00000586396 SYCP2Q9BX26 1530 aa24.57■■□□□ 1.52
SF3A2-202ENST00000586396 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
SF3A2-202ENST00000586396 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
SF3A2-202ENST00000586396 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
SF3A2-202ENST00000586396 IQSEC2Q5JU85 1478 aa24.54■■□□□ 1.52
SF3A2-202ENST00000586396 ZNF142P52746 1687 aaPredicted RBP24.52■■□□□ 1.52
SF3A2-202ENST00000586396 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
SF3A2-202ENST00000586396 NPATQ14207 1427 aa24.52■■□□□ 1.52
SF3A2-202ENST00000586396 MYO3AQ8NEV4 1616 aa24.51■■□□□ 1.51
SF3A2-202ENST00000586396 ILDR2Q71H61 639 aa24.51■■□□□ 1.51
SF3A2-202ENST00000586396 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
SF3A2-202ENST00000586396 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
SF3A2-202ENST00000586396 PLXNC1O60486 1568 aa24.49■■□□□ 1.51
SF3A2-202ENST00000586396 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
SF3A2-202ENST00000586396 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
SF3A2-202ENST00000586396 GPATCH8Q9UKJ3 1502 aaKnown RBP24.45■■□□□ 1.51
SF3A2-202ENST00000586396 SOCS7O14512 581 aa24.45■■□□□ 1.5
SF3A2-202ENST00000586396 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
SF3A2-202ENST00000586396 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
SF3A2-202ENST00000586396 PLEKHH2Q8IVE3 1493 aa24.43■■□□□ 1.5
SF3A2-202ENST00000586396 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
SF3A2-202ENST00000586396 A2MP01023 1474 aa24.41■■□□□ 1.5
SF3A2-202ENST00000586396 PLA2R1Q13018 1463 aa24.39■■□□□ 1.5
SF3A2-202ENST00000586396 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.499e-7■■□□□ 12.9
SF3A2-202ENST00000586396 KIAA1107Q9UPP5 1409 aa24.38■■□□□ 1.49
SF3A2-202ENST00000586396 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
SF3A2-202ENST00000586396 CCNB3Q8WWL7 1395 aa24.35■■□□□ 1.49
SF3A2-202ENST00000586396 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
SF3A2-202ENST00000586396 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
SF3A2-202ENST00000586396 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
SF3A2-202ENST00000586396 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
SF3A2-202ENST00000586396 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
SF3A2-202ENST00000586396 POLR1AO95602 1720 aaPredicted RBP24.31■■□□□ 1.48
SF3A2-202ENST00000586396 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
SF3A2-202ENST00000586396 PKD2Q13563 968 aa24.3■■□□□ 1.48
SF3A2-202ENST00000586396 GGT6Q6P531 493 aa24.3■■□□□ 1.48
SF3A2-202ENST00000586396 UBAP1LF5GYI3 381 aa24.28■■□□□ 1.48
SF3A2-202ENST00000586396 EHBP1L1Q8N3D4 1523 aa24.27■■□□□ 1.48
SF3A2-202ENST00000586396 DNMT1P26358 1616 aaKnown RBP24.27■■□□□ 1.48
SF3A2-202ENST00000586396 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
SF3A2-202ENST00000586396 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
SF3A2-202ENST00000586396 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
SF3A2-202ENST00000586396 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.46
SF3A2-202ENST00000586396 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
SF3A2-202ENST00000586396 RTEL1-TNFRSF6BF6WH68 1400 aa24.19■■□□□ 1.46
SF3A2-202ENST00000586396 ZNF644Q9H582 1327 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms