RNA–Protein interactions for RNA: ENST00000586261.2

CDK3-203, Transcript of cyclin dependent kinase 3, humanhuman

TSL 5

Gene CDK3, Length 803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-203ENST00000586261 FMN1Q68DA7 1419 aa25.28■■□□□ 1.64
CDK3-203ENST00000586261 SCAPERQ9BY12 1400 aa25.28■■□□□ 1.64
CDK3-203ENST00000586261 SIGLEC1Q9BZZ2 1709 aa25.26■■□□□ 1.63
CDK3-203ENST00000586261 MLECQ14165 292 aa25.25■■□□□ 1.63
CDK3-203ENST00000586261 CDK11AQ9UQ88 783 aaPredicted RBP25.23■■□□□ 1.63
CDK3-203ENST00000586261 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
CDK3-203ENST00000586261 EFCAB2Q5VUJ9 269 aa25.22■■□□□ 1.63
CDK3-203ENST00000586261 MYO5CQ9NQX4 1742 aa25.22■■□□□ 1.63
CDK3-203ENST00000586261 HSPA2P54652 639 aa25.2■■□□□ 1.62
CDK3-203ENST00000586261 FER1L4A9Z1Z3 1794 aa25.18■■□□□ 1.62
CDK3-203ENST00000586261 KIF14Q15058 1648 aa25.17■■□□□ 1.62
CDK3-203ENST00000586261 ATP10AO60312 1499 aa25.16■■□□□ 1.62
CDK3-203ENST00000586261 TROQ12816 1431 aaPredicted RBP25.14■■□□□ 1.62
CDK3-203ENST00000586261 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.62
CDK3-203ENST00000586261 CLIP1P30622 1438 aa25.12■■□□□ 1.61
CDK3-203ENST00000586261 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
CDK3-203ENST00000586261 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
CDK3-203ENST00000586261 ZNF518AQ6AHZ1 1483 aa25.1■■□□□ 1.61
CDK3-203ENST00000586261 ARHGEF12Q9NZN5 1544 aa25.1■■□□□ 1.61
CDK3-203ENST00000586261 MYT1LQ9UL68 1186 aa25.09■■□□□ 1.61
CDK3-203ENST00000586261 LRRIQ1Q96JM4 1722 aa25.07■■□□□ 1.6
CDK3-203ENST00000586261 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
CDK3-203ENST00000586261 KDM5CP41229 1560 aa25.05■■□□□ 1.6
CDK3-203ENST00000586261 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
CDK3-203ENST00000586261 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
CDK3-203ENST00000586261 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
CDK3-203ENST00000586261 DIP2CQ9Y2E4 1556 aa24.99■■□□□ 1.59
CDK3-203ENST00000586261 CCDC18Q5T9S5 1454 aa24.98■■□□□ 1.59
CDK3-203ENST00000586261 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
CDK3-203ENST00000586261 CERKQ8TCT0 537 aa24.97■■□□□ 1.59
CDK3-203ENST00000586261 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
CDK3-203ENST00000586261 MLH3Q9UHC1 1453 aa24.95■■□□□ 1.58
CDK3-203ENST00000586261 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
CDK3-203ENST00000586261 REREQ9P2R6 1566 aa24.94■■□□□ 1.58
CDK3-203ENST00000586261 ABCC1P33527 1531 aa24.93■■□□□ 1.58
CDK3-203ENST00000586261 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
CDK3-203ENST00000586261 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
CDK3-203ENST00000586261 ITSN2Q9NZM3 1697 aa24.91■■□□□ 1.58
CDK3-203ENST00000586261 ESF1Q9H501 851 aaKnown RBP24.9■■□□□ 1.58
CDK3-203ENST00000586261 SETD1BQ9UPS6 1966 aaKnown RBP24.88■■□□□ 1.57
CDK3-203ENST00000586261 DMRT2Q9Y5R5 561 aa24.88■■□□□ 1.57
CDK3-203ENST00000586261 CDC42BPAQ5VT25 1732 aa24.88■■□□□ 1.57
CDK3-203ENST00000586261 AGLP35573 1532 aa24.86■■□□□ 1.57
CDK3-203ENST00000586261 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
CDK3-203ENST00000586261 C3P01024 1663 aa24.85■■□□□ 1.57
CDK3-203ENST00000586261 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
CDK3-203ENST00000586261 ZNF777Q9ULD5 760 aaPredicted RBP24.84■■□□□ 1.57
CDK3-203ENST00000586261 KIDINS220Q9ULH0 1771 aa24.84■■□□□ 1.57
CDK3-203ENST00000586261 SAMD9LQ8IVG5 1584 aa24.79■■□□□ 1.56
CDK3-203ENST00000586261 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
CDK3-203ENST00000586261 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
CDK3-203ENST00000586261 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
CDK3-203ENST00000586261 HNRNPMP52272 730 aaKnown RBP eCLIP24.75■■□□□ 1.55
CDK3-203ENST00000586261 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
CDK3-203ENST00000586261 PTPRTO14522 1441 aa24.73■■□□□ 1.55
CDK3-203ENST00000586261 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
CDK3-203ENST00000586261 SUPT6HQ7KZ85 1726 aaKnown RBP24.7■■□□□ 1.54
CDK3-203ENST00000586261 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
CDK3-203ENST00000586261 PLEKHH2Q8IVE3 1493 aa24.69■■□□□ 1.54
CDK3-203ENST00000586261 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
CDK3-203ENST00000586261 ATP7AQ04656 1500 aa24.68■■□□□ 1.54
CDK3-203ENST00000586261 KIAA1107Q9UPP5 1409 aa24.68■■□□□ 1.54
CDK3-203ENST00000586261 NPATQ14207 1427 aa24.67■■□□□ 1.54
CDK3-203ENST00000586261 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
CDK3-203ENST00000586261 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
CDK3-203ENST00000586261 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
CDK3-203ENST00000586261 INO80Q9ULG1 1556 aaPredicted RBP24.64■■□□□ 1.54
CDK3-203ENST00000586261 A2MP01023 1474 aa24.64■■□□□ 1.53
CDK3-203ENST00000586261 CAMSAP1Q5T5Y3 1602 aa24.62■■□□□ 1.53
CDK3-203ENST00000586261 PLXNC1O60486 1568 aa24.62■■□□□ 1.53
CDK3-203ENST00000586261 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
CDK3-203ENST00000586261 GGT6Q6P531 493 aa24.6■■□□□ 1.53
CDK3-203ENST00000586261 LTBP4Q8N2S1 1624 aa24.59■■□□□ 1.53
CDK3-203ENST00000586261 DISP3Q9P2K9 1392 aa24.56■■□□□ 1.52
CDK3-203ENST00000586261 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
CDK3-203ENST00000586261 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
CDK3-203ENST00000586261 TIAM1Q13009 1591 aa24.55■■□□□ 1.52
CDK3-203ENST00000586261 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
CDK3-203ENST00000586261 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
CDK3-203ENST00000586261 EHBP1L1Q8N3D4 1523 aa24.54■■□□□ 1.52
CDK3-203ENST00000586261 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
CDK3-203ENST00000586261 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
CDK3-203ENST00000586261 ZNF142P52746 1687 aaPredicted RBP24.52■■□□□ 1.52
CDK3-203ENST00000586261 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
CDK3-203ENST00000586261 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
CDK3-203ENST00000586261 MBD5Q9P267 1494 aa24.5■■□□□ 1.51
CDK3-203ENST00000586261 PLA2R1Q13018 1463 aa24.48■■□□□ 1.51
CDK3-203ENST00000586261 PKD2Q13563 968 aa24.48■■□□□ 1.51
CDK3-203ENST00000586261 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
CDK3-203ENST00000586261 RTEL1-TNFRSF6BF6WH68 1400 aa24.47■■□□□ 1.51
CDK3-203ENST00000586261 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
CDK3-203ENST00000586261 DHX29Q7Z478 1369 aaKnown RBP24.44■■□□□ 1.5
CDK3-203ENST00000586261 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
CDK3-203ENST00000586261 TCOF1Q13428 1488 aaKnown RBP24.44■■□□□ 1.5
CDK3-203ENST00000586261 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
CDK3-203ENST00000586261 A2ML1A8K2U0 1454 aa24.4■■□□□ 1.5
CDK3-203ENST00000586261 CCDC141Q6ZP82 1450 aa24.4■■□□□ 1.5
CDK3-203ENST00000586261 KIF3BO15066 747 aa24.4■■□□□ 1.5
CDK3-203ENST00000586261 NCOA2Q15596 1464 aa24.39■■□□□ 1.5
CDK3-203ENST00000586261 UBAP1LF5GYI3 381 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms