RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 CD109Q6YHK3 1445 aa34.17■■■■□ 3.06
LAMA3-204ENST00000585600 PREX2Q70Z35 1606 aa34.16■■■■□ 3.06
LAMA3-204ENST00000585600 ZNF777Q9ULD5 760 aaPredicted RBP34.16■■■■□ 3.06
LAMA3-204ENST00000585600 TCOF1Q13428 1488 aaKnown RBP34.15■■■■□ 3.06
LAMA3-204ENST00000585600 PTPN23Q9H3S7 1636 aa34.14■■■■□ 3.06
LAMA3-204ENST00000585600 CDC42BPBQ9Y5S2 1711 aa34.14■■■■□ 3.06
LAMA3-204ENST00000585600 ZEB1P37275 1124 aaPredicted RBP34.14■■■■□ 3.06
LAMA3-204ENST00000585600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.13■■■■□ 3.05
LAMA3-204ENST00000585600 MYO5CQ9NQX4 1742 aa34.13■■■■□ 3.05
LAMA3-204ENST00000585600 ARHGAP5Q13017 1502 aa34.12■■■■□ 3.05
LAMA3-204ENST00000585600 EFCAB2Q5VUJ9 269 aa34.1■■■■□ 3.05
LAMA3-204ENST00000585600 ARAP3Q8WWN8 1544 aa34.09■■■■□ 3.05
LAMA3-204ENST00000585600 CAMSAP2Q08AD1 1489 aa34.07■■■■□ 3.04
LAMA3-204ENST00000585600 MAP3K4Q9Y6R4 1608 aa34.06■■■■□ 3.04
LAMA3-204ENST00000585600 FANCAO15360 1455 aa34.03■■■■□ 3.04
LAMA3-204ENST00000585600 SAMD9LQ8IVG5 1584 aa34.03■■■■□ 3.04
LAMA3-204ENST00000585600 ITGAEP38570 1179 aa34.01■■■■□ 3.03
LAMA3-204ENST00000585600 KIF13AQ9H1H9 1805 aa33.99■■■■□ 3.03
LAMA3-204ENST00000585600 HNRNPMP52272 730 aaKnown RBP eCLIP33.97■■■■□ 3.03
LAMA3-204ENST00000585600 MBD5Q9P267 1494 aa33.95■■■■□ 3.03
LAMA3-204ENST00000585600 PTPRKQ15262 1439 aa33.94■■■■□ 3.02
LAMA3-204ENST00000585600 KIAA1107Q9UPP5 1409 aa33.94■■■■□ 3.02
LAMA3-204ENST00000585600 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
LAMA3-204ENST00000585600 AKNAQ7Z591 1439 aa33.93■■■■□ 3.02
LAMA3-204ENST00000585600 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
LAMA3-204ENST00000585600 ABCC5O15440 1437 aa33.92■■■■□ 3.02
LAMA3-204ENST00000585600 PLEKHH2Q8IVE3 1493 aa33.91■■■■□ 3.02
LAMA3-204ENST00000585600 ABCC1P33527 1531 aa33.9■■■■□ 3.02
LAMA3-204ENST00000585600 SYCP2Q9BX26 1530 aa33.9■■■■□ 3.02
LAMA3-204ENST00000585600 DAPK1P53355 1430 aa33.89■■■■□ 3.02
LAMA3-204ENST00000585600 NEO1Q92859 1461 aa33.88■■■■□ 3.01
LAMA3-204ENST00000585600 PPRC1Q5VV67 1664 aaKnown RBP33.87■■■■□ 3.01
LAMA3-204ENST00000585600 ADGRL1O94910 1474 aa33.86■■■■□ 3.01
LAMA3-204ENST00000585600 SCAPERQ9BY12 1400 aa33.85■■■■□ 3.01
LAMA3-204ENST00000585600 DNMT1P26358 1616 aaKnown RBP33.85■■■■□ 3.01
LAMA3-204ENST00000585600 RSPH4AQ5TD94 716 aa33.84■■■■□ 3.01
LAMA3-204ENST00000585600 TRAPPC8Q9Y2L5 1435 aa33.83■■■■□ 3.01
LAMA3-204ENST00000585600 ARHGEF5Q12774 1597 aa33.83■■■■□ 3.01
LAMA3-204ENST00000585600 CHIC2Q9UKJ5 165 aa33.82■■■■□ 3
LAMA3-204ENST00000585600 CFAP74Q9C0B2 1584 aa33.82■■■■□ 3
LAMA3-204ENST00000585600 TEX14Q8IWB6 1497 aa33.81■■■■□ 3
LAMA3-204ENST00000585600 TSPOAP1O95153 1857 aa33.81■■■■□ 3
LAMA3-204ENST00000585600 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
LAMA3-204ENST00000585600 AFAP1Q8N556 730 aa33.79■■■■□ 3
LAMA3-204ENST00000585600 TSPY4P0CV99 314 aa33.76■■■□□ 2.99
LAMA3-204ENST00000585600 TSPY10P0CW01 314 aa33.76■■■□□ 2.99
LAMA3-204ENST00000585600 C9orf84Q5VXU9 1444 aa33.71■■■□□ 2.99
LAMA3-204ENST00000585600 SHANK2Q9UPX8 1470 aa33.71■■■□□ 2.99
LAMA3-204ENST00000585600 RAPGEF3O95398 923 aa33.69■■■□□ 2.98
LAMA3-204ENST00000585600 DENND4BO75064 1496 aaPredicted RBP33.69■■■□□ 2.98
LAMA3-204ENST00000585600 POGZQ7Z3K3 1410 aa33.69■■■□□ 2.98
LAMA3-204ENST00000585600 CROCC2H7BZ55 1655 aa33.68■■■□□ 2.98
LAMA3-204ENST00000585600 RRP7BPQ9NSQ0 103 aa33.67■■■□□ 2.98
LAMA3-204ENST00000585600 ROCK1Q13464 1354 aa33.67■■■□□ 2.98
LAMA3-204ENST00000585600 ZNF518AQ6AHZ1 1483 aa33.66■■■□□ 2.98
LAMA3-204ENST00000585600 NCOA1Q15788 1441 aa33.65■■■□□ 2.98
LAMA3-204ENST00000585600 ADGRL2O95490 1459 aa33.64■■■□□ 2.98
LAMA3-204ENST00000585600 SPAG9O60271 1321 aaKnown RBP33.64■■■□□ 2.98
LAMA3-204ENST00000585600 COL17A1Q9UMD9 1497 aaPredicted RBP33.64■■■□□ 2.98
LAMA3-204ENST00000585600 HFM1A2PYH4 1435 aa33.62■■■□□ 2.97
LAMA3-204ENST00000585600 MAST1Q9Y2H9 1570 aa33.62■■■□□ 2.97
LAMA3-204ENST00000585600 ANKRD30AQ9BXX3 1397 aa33.61■■■□□ 2.97
LAMA3-204ENST00000585600 NAIPQ13075 1403 aa33.6■■■□□ 2.97
LAMA3-204ENST00000585600 RTEL1-TNFRSF6BF6WH68 1400 aa33.59■■■□□ 2.97
LAMA3-204ENST00000585600 KDM5CP41229 1560 aa33.58■■■□□ 2.97
LAMA3-204ENST00000585600 SETD5Q9C0A6 1442 aa33.57■■■□□ 2.97
LAMA3-204ENST00000585600 FRMPD1Q5SYB0 1578 aa33.55■■■□□ 2.96
LAMA3-204ENST00000585600 ZFYVE16Q7Z3T8 1539 aa33.54■■■□□ 2.96
LAMA3-204ENST00000585600 RICTORQ6R327 1708 aa33.54■■■□□ 2.96
LAMA3-204ENST00000585600 MLH3Q9UHC1 1453 aa33.52■■■□□ 2.96
LAMA3-204ENST00000585600 ADGBQ8N7X0 1667 aa33.52■■■□□ 2.96
LAMA3-204ENST00000585600 KIF15Q9NS87 1388 aa33.52■■■□□ 2.96
LAMA3-204ENST00000585600 RAB3GAP2Q9H2M9 1393 aa33.51■■■□□ 2.96
LAMA3-204ENST00000585600 INO80Q9ULG1 1556 aaPredicted RBP33.51■■■□□ 2.95
LAMA3-204ENST00000585600 MYT1LQ9UL68 1186 aa33.51■■■□□ 2.95
LAMA3-204ENST00000585600 ATP7AQ04656 1500 aa33.5■■■□□ 2.95
LAMA3-204ENST00000585600 PLXNC1O60486 1568 aa33.46■■■□□ 2.95
LAMA3-204ENST00000585600 KIDINS220Q9ULH0 1771 aa33.45■■■□□ 2.95
LAMA3-204ENST00000585600 HECW2Q9P2P5 1572 aa33.44■■■□□ 2.94
LAMA3-204ENST00000585600 ZMYM4Q5VZL5 1548 aa33.43■■■□□ 2.94
LAMA3-204ENST00000585600 GCC2Q8IWJ2 1684 aa33.43■■■□□ 2.94
LAMA3-204ENST00000585600 ANKRD50Q9ULJ7 1429 aa33.42■■■□□ 2.94
LAMA3-204ENST00000585600 CCER1Q8TC90 406 aaPredicted RBP33.42■■■□□ 2.94
LAMA3-204ENST00000585600 KDM6BO15054 1643 aa33.42■■■□□ 2.94
LAMA3-204ENST00000585600 YEATS2Q9ULM3 1422 aa33.4■■■□□ 2.94
LAMA3-204ENST00000585600 MAGI2Q86UL8 1455 aa33.37■■■□□ 2.93
LAMA3-204ENST00000585600 DUOX2Q9NRD8 1548 aa33.37■■■□□ 2.93
LAMA3-204ENST00000585600 DHX29Q7Z478 1369 aaKnown RBP33.34■■■□□ 2.93
LAMA3-204ENST00000585600 ABCA6Q8N139 1617 aa33.33■■■□□ 2.93
LAMA3-204ENST00000585600 DIP2CQ9Y2E4 1556 aa33.31■■■□□ 2.92
LAMA3-204ENST00000585600 ERBINQ96RT1 1412 aa33.3■■■□□ 2.92
LAMA3-204ENST00000585600 A2MP01023 1474 aa33.3■■■□□ 2.92
LAMA3-204ENST00000585600 ATP10AO60312 1499 aa33.24■■■□□ 2.91
LAMA3-204ENST00000585600 TRIM52Q96A61 297 aa33.22■■■□□ 2.91
LAMA3-204ENST00000585600 KIF3BO15066 747 aa33.2■■■□□ 2.91
LAMA3-204ENST00000585600 ARHGEF40Q8TER5 1519 aa33.18■■■□□ 2.9
LAMA3-204ENST00000585600 DHX57Q6P158 1386 aaKnown RBP33.17■■■□□ 2.9
LAMA3-204ENST00000585600 ACIN1Q9UKV3 1341 aaKnown RBP33.16■■■□□ 2.9
LAMA3-204ENST00000585600 NUP155O75694 1391 aa33.13■■■□□ 2.89
LAMA3-204ENST00000585600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms