RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-207ENST00000584668 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
SRSF1-207ENST00000584668 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
SRSF1-207ENST00000584668 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
SRSF1-207ENST00000584668 MLECQ14165 292 aa14.17□□□□□ -0.14
SRSF1-207ENST00000584668 ATP10AO60312 1499 aa14.17□□□□□ -0.14
SRSF1-207ENST00000584668 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SRSF1-207ENST00000584668 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
SRSF1-207ENST00000584668 KIF14Q15058 1648 aa14.16□□□□□ -0.14
SRSF1-207ENST00000584668 ZNF518AQ6AHZ1 1483 aa14.15□□□□□ -0.14
SRSF1-207ENST00000584668 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
SRSF1-207ENST00000584668 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
SRSF1-207ENST00000584668 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
SRSF1-207ENST00000584668 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
SRSF1-207ENST00000584668 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
SRSF1-207ENST00000584668 CLIP1P30622 1438 aa14.12□□□□□ -0.15
SRSF1-207ENST00000584668 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
SRSF1-207ENST00000584668 ARHGAP5Q13017 1502 aa14.11□□□□□ -0.15
SRSF1-207ENST00000584668 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
SRSF1-207ENST00000584668 KDM5CP41229 1560 aa14.1□□□□□ -0.15
SRSF1-207ENST00000584668 REREQ9P2R6 1566 aa14.1□□□□□ -0.15
SRSF1-207ENST00000584668 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
SRSF1-207ENST00000584668 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
SRSF1-207ENST00000584668 ESF1Q9H501 851 aaKnown RBP14.09□□□□□ -0.15
SRSF1-207ENST00000584668 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
SRSF1-207ENST00000584668 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-207ENST00000584668 C3P01024 1663 aa14.07□□□□□ -0.16
SRSF1-207ENST00000584668 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
SRSF1-207ENST00000584668 PTPRTO14522 1441 aa14.05□□□□□ -0.16
SRSF1-207ENST00000584668 IQSEC2Q5JU85 1478 aa14.05□□□□□ -0.16
SRSF1-207ENST00000584668 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-207ENST00000584668 SOCS7O14512 581 aa14.03□□□□□ -0.16
SRSF1-207ENST00000584668 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
SRSF1-207ENST00000584668 AGLP35573 1532 aa14.03□□□□□ -0.16
SRSF1-207ENST00000584668 PREX2Q70Z35 1606 aa14.03□□□□□ -0.16
SRSF1-207ENST00000584668 ABCA6Q8N139 1617 aa14.03□□□□□ -0.16
SRSF1-207ENST00000584668 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.16
SRSF1-207ENST00000584668 CDC42BPBQ9Y5S2 1711 aa14.01□□□□□ -0.17
SRSF1-207ENST00000584668 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
SRSF1-207ENST00000584668 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
SRSF1-207ENST00000584668 ABCC1P33527 1531 aa14□□□□□ -0.17
SRSF1-207ENST00000584668 MROH2AA6NES4 1674 aa14□□□□□ -0.17
SRSF1-207ENST00000584668 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
SRSF1-207ENST00000584668 TRAPPC8Q9Y2L5 1435 aa13.99□□□□□ -0.17
SRSF1-207ENST00000584668 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
SRSF1-207ENST00000584668 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
SRSF1-207ENST00000584668 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
SRSF1-207ENST00000584668 AFAP1Q8N556 730 aa13.97□□□□□ -0.17
SRSF1-207ENST00000584668 LRRIQ1Q96JM4 1722 aa13.96□□□□□ -0.17
SRSF1-207ENST00000584668 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
SRSF1-207ENST00000584668 NPATQ14207 1427 aa13.95□□□□□ -0.18
SRSF1-207ENST00000584668 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
SRSF1-207ENST00000584668 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
SRSF1-207ENST00000584668 CDC42BPAQ5VT25 1732 aa13.94□□□□□ -0.18
SRSF1-207ENST00000584668 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
SRSF1-207ENST00000584668 ILDR2Q71H61 639 aa13.93□□□□□ -0.18
SRSF1-207ENST00000584668 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-207ENST00000584668 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
SRSF1-207ENST00000584668 SAMD9LQ8IVG5 1584 aa13.89□□□□□ -0.19
SRSF1-207ENST00000584668 CASKIN1Q8WXD9 1431 aa13.89□□□□□ -0.19
SRSF1-207ENST00000584668 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
SRSF1-207ENST00000584668 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
SRSF1-207ENST00000584668 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
SRSF1-207ENST00000584668 SYCP2Q9BX26 1530 aa13.87□□□□□ -0.19
SRSF1-207ENST00000584668 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
SRSF1-207ENST00000584668 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-207ENST00000584668 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
SRSF1-207ENST00000584668 ATP7AQ04656 1500 aa13.86□□□□□ -0.19
SRSF1-207ENST00000584668 PKD2Q13563 968 aa13.86□□□□□ -0.19
SRSF1-207ENST00000584668 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
SRSF1-207ENST00000584668 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
SRSF1-207ENST00000584668 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
SRSF1-207ENST00000584668 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
SRSF1-207ENST00000584668 INO80Q9ULG1 1556 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-207ENST00000584668 UBAP1LF5GYI3 381 aa13.84□□□□□ -0.19
SRSF1-207ENST00000584668 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
SRSF1-207ENST00000584668 A2MP01023 1474 aa13.82□□□□□ -0.2
SRSF1-207ENST00000584668 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
SRSF1-207ENST00000584668 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
SRSF1-207ENST00000584668 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
SRSF1-207ENST00000584668 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
SRSF1-207ENST00000584668 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-207ENST00000584668 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
SRSF1-207ENST00000584668 CPS1P31327 1500 aa13.79□□□□□ -0.2
SRSF1-207ENST00000584668 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
SRSF1-207ENST00000584668 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
SRSF1-207ENST00000584668 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
SRSF1-207ENST00000584668 A2ML1A8K2U0 1454 aa13.77□□□□□ -0.21
SRSF1-207ENST00000584668 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
SRSF1-207ENST00000584668 CFDP1Q9UEE9 299 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-207ENST00000584668 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
SRSF1-207ENST00000584668 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
SRSF1-207ENST00000584668 GGT6Q6P531 493 aa13.75□□□□□ -0.21
SRSF1-207ENST00000584668 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-207ENST00000584668 TOM1O60784 492 aa13.74□□□□□ -0.21
SRSF1-207ENST00000584668 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRSF1-207ENST00000584668 MTUS2Q5JR59 1369 aa13.73□□□□□ -0.21
SRSF1-207ENST00000584668 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
SRSF1-207ENST00000584668 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
SRSF1-207ENST00000584668 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms