RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 MED1Q15648 1581 aaPredicted RBP11.04□□□□□ -0.64
CTC1-212ENST00000584439 ATP10BO94823 1461 aa11.04□□□□□ -0.64
CTC1-212ENST00000584439 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
CTC1-212ENST00000584439 FANCAO15360 1455 aa11.02□□□□□ -0.65
CTC1-212ENST00000584439 NPM3O75607 178 aaKnown RBP11.01□□□□□ -0.65
CTC1-212ENST00000584439 ZFYVE16Q7Z3T8 1539 aa11□□□□□ -0.65
CTC1-212ENST00000584439 ARHGEF12Q9NZN5 1544 aa11□□□□□ -0.65
CTC1-212ENST00000584439 C3P01024 1663 aa11□□□□□ -0.65
CTC1-212ENST00000584439 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
CTC1-212ENST00000584439 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 DMRT2Q9Y5R5 561 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 PTPRTO14522 1441 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 POGZQ7Z3K3 1410 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 DENND4BO75064 1496 aaPredicted RBP10.99□□□□□ -0.65
CTC1-212ENST00000584439 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 ZMYM4Q5VZL5 1548 aa10.99□□□□□ -0.65
CTC1-212ENST00000584439 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
CTC1-212ENST00000584439 AKNAQ7Z591 1439 aa10.97□□□□□ -0.65
CTC1-212ENST00000584439 EFCAB5A4FU69 1503 aa10.96□□□□□ -0.65
CTC1-212ENST00000584439 GOLGA3Q08378 1498 aa10.94□□□□□ -0.66
CTC1-212ENST00000584439 UHRF1BP1Q6BDS2 1440 aa10.94□□□□□ -0.66
CTC1-212ENST00000584439 UBAP1LF5GYI3 381 aa10.94□□□□□ -0.66
CTC1-212ENST00000584439 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
CTC1-212ENST00000584439 RAPGEF6Q8TEU7 1601 aa10.93□□□□□ -0.66
CTC1-212ENST00000584439 CFAP74Q9C0B2 1584 aa10.93□□□□□ -0.66
CTC1-212ENST00000584439 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
CTC1-212ENST00000584439 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
CTC1-212ENST00000584439 HSPA1LP34931 641 aa10.91□□□□□ -0.66
CTC1-212ENST00000584439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTC1-212ENST00000584439 NCOA1Q15788 1441 aa10.9□□□□□ -0.66
CTC1-212ENST00000584439 CAMSAP1Q5T5Y3 1602 aa10.89□□□□□ -0.67
CTC1-212ENST00000584439 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
CTC1-212ENST00000584439 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
CTC1-212ENST00000584439 ATP10AO60312 1499 aa10.87□□□□□ -0.67
CTC1-212ENST00000584439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
CTC1-212ENST00000584439 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
CTC1-212ENST00000584439 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
CTC1-212ENST00000584439 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
CTC1-212ENST00000584439 C9orf84Q5VXU9 1444 aa10.85□□□□□ -0.67
CTC1-212ENST00000584439 PIP4K2BP78356 416 aa10.84□□□□□ -0.67
CTC1-212ENST00000584439 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
CTC1-212ENST00000584439 SCAPERQ9BY12 1400 aa10.84□□□□□ -0.67
CTC1-212ENST00000584439 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
CTC1-212ENST00000584439 SAMD9Q5K651 1589 aa10.83□□□□□ -0.68
CTC1-212ENST00000584439 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
CTC1-212ENST00000584439 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
CTC1-212ENST00000584439 ABCA6Q8N139 1617 aa10.82□□□□□ -0.68
CTC1-212ENST00000584439 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
CTC1-212ENST00000584439 MYO5CQ9NQX4 1742 aa10.81□□□□□ -0.68
CTC1-212ENST00000584439 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
CTC1-212ENST00000584439 TRAPPC8Q9Y2L5 1435 aa10.8□□□□□ -0.68
CTC1-212ENST00000584439 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
CTC1-212ENST00000584439 MYO3AQ8NEV4 1616 aa10.78□□□□□ -0.68
CTC1-212ENST00000584439 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
CTC1-212ENST00000584439 MROH2AA6NES4 1674 aa10.76□□□□□ -0.69
CTC1-212ENST00000584439 KDM5CP41229 1560 aa10.76□□□□□ -0.69
CTC1-212ENST00000584439 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
CTC1-212ENST00000584439 REREQ9P2R6 1566 aa10.75□□□□□ -0.69
CTC1-212ENST00000584439 PLEKHD1A6NEE1 506 aa10.75□□□□□ -0.69
CTC1-212ENST00000584439 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
CTC1-212ENST00000584439 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
CTC1-212ENST00000584439 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
CTC1-212ENST00000584439 FKBP8Q14318 412 aa10.74□□□□□ -0.69
CTC1-212ENST00000584439 AFAP1Q8N556 730 aa10.74□□□□□ -0.69
CTC1-212ENST00000584439 PLCH2O75038 1416 aa10.74□□□□□ -0.69
CTC1-212ENST00000584439 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
CTC1-212ENST00000584439 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
CTC1-212ENST00000584439 CDC42BPBQ9Y5S2 1711 aa10.73□□□□□ -0.69
CTC1-212ENST00000584439 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
CTC1-212ENST00000584439 KIF14Q15058 1648 aa10.73□□□□□ -0.69
CTC1-212ENST00000584439 AGLP35573 1532 aa10.72□□□□□ -0.69
CTC1-212ENST00000584439 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
CTC1-212ENST00000584439 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.69
CTC1-212ENST00000584439 NEURL4Q96JN8 1562 aa10.71□□□□□ -0.69
CTC1-212ENST00000584439 PLA2R1Q13018 1463 aa10.7□□□□□ -0.7
CTC1-212ENST00000584439 ZNF518AQ6AHZ1 1483 aa10.7□□□□□ -0.7
CTC1-212ENST00000584439 TOM1O60784 492 aa10.7□□□□□ -0.7
CTC1-212ENST00000584439 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
CTC1-212ENST00000584439 RANGAP1P46060 587 aaPredicted RBP10.69□□□□□ -0.7
CTC1-212ENST00000584439 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
CTC1-212ENST00000584439 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
CTC1-212ENST00000584439 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
CTC1-212ENST00000584439 LRRIQ1Q96JM4 1722 aa10.68□□□□□ -0.7
CTC1-212ENST00000584439 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
CTC1-212ENST00000584439 VWDEQ8N2E2 1590 aa10.68□□□□□ -0.7
CTC1-212ENST00000584439 XIRP1Q702N8 1843 aaKnown RBP10.68□□□□□ -0.7
CTC1-212ENST00000584439 NPATQ14207 1427 aa10.67□□□□□ -0.7
CTC1-212ENST00000584439 PKD2Q13563 968 aa10.67□□□□□ -0.7
CTC1-212ENST00000584439 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
CTC1-212ENST00000584439 CPS1P31327 1500 aa10.67□□□□□ -0.7
CTC1-212ENST00000584439 SHANK2Q9UPX8 1470 aa10.67□□□□□ -0.7
CTC1-212ENST00000584439 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
CTC1-212ENST00000584439 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.7
CTC1-212ENST00000584439 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
CTC1-212ENST00000584439 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
CTC1-212ENST00000584439 CNTLNQ9NXG0 1405 aa10.64□□□□□ -0.71
CTC1-212ENST00000584439 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
CTC1-212ENST00000584439 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
CTC1-212ENST00000584439 ABCC1P33527 1531 aa10.61□□□□□ -0.71
CTC1-212ENST00000584439 RNF17Q9BXT8 1623 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms