RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
MSI2-218ENST00000583821 EFCAB5A4FU69 1503 aa13.6□□□□□ -0.23
MSI2-218ENST00000583821 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
MSI2-218ENST00000583821 RICTORQ6R327 1708 aa13.57□□□□□ -0.24
MSI2-218ENST00000583821 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
MSI2-218ENST00000583821 NEO1Q92859 1461 aa13.55□□□□□ -0.24
MSI2-218ENST00000583821 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
MSI2-218ENST00000583821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.54□□□□□ -0.24
MSI2-218ENST00000583821 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
MSI2-218ENST00000583821 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
MSI2-218ENST00000583821 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
MSI2-218ENST00000583821 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
MSI2-218ENST00000583821 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
MSI2-218ENST00000583821 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
MSI2-218ENST00000583821 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
MSI2-218ENST00000583821 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
MSI2-218ENST00000583821 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
MSI2-218ENST00000583821 MYO5CQ9NQX4 1742 aa13.49□□□□□ -0.25
MSI2-218ENST00000583821 RIMS1Q86UR5 1692 aaKnown RBP13.49□□□□□ -0.25
MSI2-218ENST00000583821 KIF14Q15058 1648 aa13.49□□□□□ -0.25
MSI2-218ENST00000583821 FANCAO15360 1455 aa13.48□□□□□ -0.25
MSI2-218ENST00000583821 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
MSI2-218ENST00000583821 ABCB7O75027 752 aa13.48□□□□□ -0.25
MSI2-218ENST00000583821 PTPRMP28827 1452 aa13.47□□□□□ -0.25
MSI2-218ENST00000583821 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
MSI2-218ENST00000583821 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
MSI2-218ENST00000583821 APLP2Q06481 763 aa13.46□□□□□ -0.25
MSI2-218ENST00000583821 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
MSI2-218ENST00000583821 PLEKHD1A6NEE1 506 aa13.45□□□□□ -0.26
MSI2-218ENST00000583821 DSG3P32926 999 aa13.45□□□□□ -0.26
MSI2-218ENST00000583821 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
MSI2-218ENST00000583821 ZFYVE16Q7Z3T8 1539 aa13.44□□□□□ -0.26
MSI2-218ENST00000583821 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
MSI2-218ENST00000583821 PCF11O94913 1555 aaKnown RBP13.42□□□□□ -0.26
MSI2-218ENST00000583821 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
MSI2-218ENST00000583821 FER1L4A9Z1Z3 1794 aa13.42□□□□□ -0.26
MSI2-218ENST00000583821 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
MSI2-218ENST00000583821 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
MSI2-218ENST00000583821 ATP1B4Q9UN42 357 aaPredicted RBP13.41□□□□□ -0.26
MSI2-218ENST00000583821 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
MSI2-218ENST00000583821 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
MSI2-218ENST00000583821 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
MSI2-218ENST00000583821 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
MSI2-218ENST00000583821 PLCH2O75038 1416 aa13.38□□□□□ -0.27
MSI2-218ENST00000583821 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
MSI2-218ENST00000583821 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
MSI2-218ENST00000583821 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
MSI2-218ENST00000583821 ARHGAP5Q13017 1502 aa13.35□□□□□ -0.27
MSI2-218ENST00000583821 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
MSI2-218ENST00000583821 CDC42BPAQ5VT25 1732 aa13.34□□□□□ -0.27
MSI2-218ENST00000583821 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
MSI2-218ENST00000583821 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
MSI2-218ENST00000583821 POLA2Q14181 598 aa13.33□□□□□ -0.28
MSI2-218ENST00000583821 KDM5CP41229 1560 aa13.32□□□□□ -0.28
MSI2-218ENST00000583821 ABCA6Q8N139 1617 aa13.32□□□□□ -0.28
MSI2-218ENST00000583821 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
MSI2-218ENST00000583821 CLIP1P30622 1438 aa13.31□□□□□ -0.28
MSI2-218ENST00000583821 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
MSI2-218ENST00000583821 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
MSI2-218ENST00000583821 MLECQ14165 292 aa13.3□□□□□ -0.28
MSI2-218ENST00000583821 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
MSI2-218ENST00000583821 ATP10AO60312 1499 aa13.29□□□□□ -0.28
MSI2-218ENST00000583821 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
MSI2-218ENST00000583821 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
MSI2-218ENST00000583821 ABCC1P33527 1531 aa13.29□□□□□ -0.28
MSI2-218ENST00000583821 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
MSI2-218ENST00000583821 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
MSI2-218ENST00000583821 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
MSI2-218ENST00000583821 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
MSI2-218ENST00000583821 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
MSI2-218ENST00000583821 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
MSI2-218ENST00000583821 HSPA2P54652 639 aa13.25□□□□□ -0.29
MSI2-218ENST00000583821 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
MSI2-218ENST00000583821 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
MSI2-218ENST00000583821 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
MSI2-218ENST00000583821 C3P01024 1663 aa13.24□□□□□ -0.29
MSI2-218ENST00000583821 SYCP2Q9BX26 1530 aa13.22□□□□□ -0.29
MSI2-218ENST00000583821 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.3
MSI2-218ENST00000583821 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
MSI2-218ENST00000583821 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
MSI2-218ENST00000583821 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
MSI2-218ENST00000583821 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
MSI2-218ENST00000583821 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
MSI2-218ENST00000583821 INO80Q9ULG1 1556 aaPredicted RBP13.17□□□□□ -0.3
MSI2-218ENST00000583821 AGLP35573 1532 aa13.17□□□□□ -0.3
MSI2-218ENST00000583821 TIAM1Q13009 1591 aa13.16□□□□□ -0.3
MSI2-218ENST00000583821 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
MSI2-218ENST00000583821 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
MSI2-218ENST00000583821 ZNF777Q9ULD5 760 aaPredicted RBP13.15□□□□□ -0.3
MSI2-218ENST00000583821 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
MSI2-218ENST00000583821 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
MSI2-218ENST00000583821 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
MSI2-218ENST00000583821 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
MSI2-218ENST00000583821 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
MSI2-218ENST00000583821 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
MSI2-218ENST00000583821 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
MSI2-218ENST00000583821 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
MSI2-218ENST00000583821 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
MSI2-218ENST00000583821 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
MSI2-218ENST00000583821 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms