RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 HFM1A2PYH4 1435 aa15.18■□□□□ 0.02
IFT20-213ENST00000583796 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
IFT20-213ENST00000583796 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
IFT20-213ENST00000583796 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
IFT20-213ENST00000583796 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
IFT20-213ENST00000583796 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
IFT20-213ENST00000583796 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
IFT20-213ENST00000583796 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
IFT20-213ENST00000583796 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
IFT20-213ENST00000583796 ARID3CA6NKF2 412 aa15.14■□□□□ 0.01
IFT20-213ENST00000583796 ITGAEP38570 1179 aa15.14■□□□□ 0.01
IFT20-213ENST00000583796 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
IFT20-213ENST00000583796 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
IFT20-213ENST00000583796 ROCK1Q13464 1354 aa15.12■□□□□ 0.01
IFT20-213ENST00000583796 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
IFT20-213ENST00000583796 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
IFT20-213ENST00000583796 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
IFT20-213ENST00000583796 ZCCHC11Q5TAX3 1644 aaKnown RBP15.09■□□□□ 0.01
IFT20-213ENST00000583796 DAPK1P53355 1430 aa15.09■□□□□ 0.01
IFT20-213ENST00000583796 NAIPQ13075 1403 aa15.09■□□□□ 0.01
IFT20-213ENST00000583796 PREX2Q70Z35 1606 aa15.08■□□□□ 0.01
IFT20-213ENST00000583796 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
IFT20-213ENST00000583796 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
IFT20-213ENST00000583796 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
IFT20-213ENST00000583796 ADGBQ8N7X0 1667 aa15.05■□□□□ 0
IFT20-213ENST00000583796 ABCC5O15440 1437 aa15.05■□□□□ -0
IFT20-213ENST00000583796 ADGRL2O95490 1459 aa15.04■□□□□ -0
IFT20-213ENST00000583796 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
IFT20-213ENST00000583796 MAPKBP1O60336 1514 aa15.03■□□□□ -0
IFT20-213ENST00000583796 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
IFT20-213ENST00000583796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02■□□□□ -0
IFT20-213ENST00000583796 ARAP3Q8WWN8 1544 aa15.02■□□□□ -0
IFT20-213ENST00000583796 PLEKHH2Q8IVE3 1493 aa15.01□□□□□ -0.01
IFT20-213ENST00000583796 TTC37Q6PGP7 1564 aa15.01□□□□□ -0.01
IFT20-213ENST00000583796 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
IFT20-213ENST00000583796 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
IFT20-213ENST00000583796 WDR7Q9Y4E6 1490 aa14.98□□□□□ -0.01
IFT20-213ENST00000583796 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
IFT20-213ENST00000583796 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
IFT20-213ENST00000583796 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
IFT20-213ENST00000583796 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
IFT20-213ENST00000583796 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
IFT20-213ENST00000583796 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.02
IFT20-213ENST00000583796 ARHGAP5Q13017 1502 aa14.95□□□□□ -0.02
IFT20-213ENST00000583796 PLCH2O75038 1416 aa14.95□□□□□ -0.02
IFT20-213ENST00000583796 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
IFT20-213ENST00000583796 MAST1Q9Y2H9 1570 aa14.95□□□□□ -0.02
IFT20-213ENST00000583796 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
IFT20-213ENST00000583796 ABCA9Q8IUA7 1624 aa14.93□□□□□ -0.02
IFT20-213ENST00000583796 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
IFT20-213ENST00000583796 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
IFT20-213ENST00000583796 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
IFT20-213ENST00000583796 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
IFT20-213ENST00000583796 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
IFT20-213ENST00000583796 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
IFT20-213ENST00000583796 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
IFT20-213ENST00000583796 ABCC1P33527 1531 aa14.89□□□□□ -0.03
IFT20-213ENST00000583796 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
IFT20-213ENST00000583796 KDM6BO15054 1643 aa14.89□□□□□ -0.03
IFT20-213ENST00000583796 PLXNC1O60486 1568 aa14.88□□□□□ -0.03
IFT20-213ENST00000583796 ASXL2Q76L83 1435 aa14.88□□□□□ -0.03
IFT20-213ENST00000583796 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
IFT20-213ENST00000583796 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
IFT20-213ENST00000583796 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
IFT20-213ENST00000583796 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
IFT20-213ENST00000583796 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
IFT20-213ENST00000583796 KDM5DQ9BY66 1539 aa14.85□□□□□ -0.03
IFT20-213ENST00000583796 CFAP74Q9C0B2 1584 aa14.83□□□□□ -0.03
IFT20-213ENST00000583796 KCNH8Q96L42 1107 aa14.83□□□□□ -0.03
IFT20-213ENST00000583796 KIF15Q9NS87 1388 aa14.83□□□□□ -0.04
IFT20-213ENST00000583796 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
IFT20-213ENST00000583796 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
IFT20-213ENST00000583796 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
IFT20-213ENST00000583796 FANCAO15360 1455 aa14.8□□□□□ -0.04
IFT20-213ENST00000583796 ZNF316A6NFI3 1004 aaPredicted RBP14.8□□□□□ -0.04
IFT20-213ENST00000583796 TRIM52Q96A61 297 aa14.8□□□□□ -0.04
IFT20-213ENST00000583796 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
IFT20-213ENST00000583796 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 ARHGEF12Q9NZN5 1544 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 PZPP20742 1482 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
IFT20-213ENST00000583796 ERBINQ96RT1 1412 aa14.78□□□□□ -0.04
IFT20-213ENST00000583796 TONSLQ96HA7 1378 aa14.77□□□□□ -0.04
IFT20-213ENST00000583796 UNC13BO14795 1591 aa14.77□□□□□ -0.04
IFT20-213ENST00000583796 ZFYVE16Q7Z3T8 1539 aa14.75□□□□□ -0.05
IFT20-213ENST00000583796 INO80Q9ULG1 1556 aaPredicted RBP14.74□□□□□ -0.05
IFT20-213ENST00000583796 ADGRL1O94910 1474 aa14.74□□□□□ -0.05
IFT20-213ENST00000583796 ANKRD30BQ9BXX2 1392 aa14.74□□□□□ -0.05
IFT20-213ENST00000583796 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
IFT20-213ENST00000583796 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
IFT20-213ENST00000583796 GLI2P10070 1586 aa14.74□□□□□ -0.05
IFT20-213ENST00000583796 RPRD2Q5VT52 1461 aaKnown RBP14.73□□□□□ -0.05
IFT20-213ENST00000583796 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
IFT20-213ENST00000583796 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
IFT20-213ENST00000583796 NEO1Q92859 1461 aa14.72□□□□□ -0.05
IFT20-213ENST00000583796 CD109Q6YHK3 1445 aa14.72□□□□□ -0.05
IFT20-213ENST00000583796 NEUROD1Q13562 356 aa14.71□□□□□ -0.05
IFT20-213ENST00000583796 ATP7AQ04656 1500 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms