RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 KIAA1107Q9UPP5 1409 aa14.34□□□□□ -0.11
UBBP4-201ENST00000583708 TTC37Q6PGP7 1564 aa14.34□□□□□ -0.11
UBBP4-201ENST00000583708 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
UBBP4-201ENST00000583708 AKNAQ7Z591 1439 aa14.33□□□□□ -0.11
UBBP4-201ENST00000583708 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
UBBP4-201ENST00000583708 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
UBBP4-201ENST00000583708 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
UBBP4-201ENST00000583708 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
UBBP4-201ENST00000583708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBBP4-201ENST00000583708 PPRC1Q5VV67 1664 aaKnown RBP14.28□□□□□ -0.12
UBBP4-201ENST00000583708 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.12
UBBP4-201ENST00000583708 DENND4BO75064 1496 aaPredicted RBP14.27□□□□□ -0.12
UBBP4-201ENST00000583708 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
UBBP4-201ENST00000583708 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
UBBP4-201ENST00000583708 FGD6Q6ZV73 1430 aa14.26□□□□□ -0.13
UBBP4-201ENST00000583708 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
UBBP4-201ENST00000583708 CDC42BPBQ9Y5S2 1711 aa14.26□□□□□ -0.13
UBBP4-201ENST00000583708 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
UBBP4-201ENST00000583708 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
UBBP4-201ENST00000583708 MAGI2Q86UL8 1455 aa14.24□□□□□ -0.13
UBBP4-201ENST00000583708 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
UBBP4-201ENST00000583708 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
UBBP4-201ENST00000583708 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
UBBP4-201ENST00000583708 ABCC1P33527 1531 aa14.21□□□□□ -0.13
UBBP4-201ENST00000583708 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
UBBP4-201ENST00000583708 POGZQ7Z3K3 1410 aa14.21□□□□□ -0.13
UBBP4-201ENST00000583708 RRBP1Q9P2E9 1410 aaKnown RBP14.21□□□□□ -0.13
UBBP4-201ENST00000583708 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
UBBP4-201ENST00000583708 CAMSAP2Q08AD1 1489 aa14.2□□□□□ -0.14
UBBP4-201ENST00000583708 MBD5Q9P267 1494 aa14.2□□□□□ -0.14
UBBP4-201ENST00000583708 KDM6BO15054 1643 aa14.2□□□□□ -0.14
UBBP4-201ENST00000583708 RTEL1-TNFRSF6BF6WH68 1400 aa14.2□□□□□ -0.14
UBBP4-201ENST00000583708 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
UBBP4-201ENST00000583708 ARHGEF5Q12774 1597 aa14.19□□□□□ -0.14
UBBP4-201ENST00000583708 SAMD9LQ8IVG5 1584 aa14.19□□□□□ -0.14
UBBP4-201ENST00000583708 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
UBBP4-201ENST00000583708 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
UBBP4-201ENST00000583708 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
UBBP4-201ENST00000583708 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
UBBP4-201ENST00000583708 AFAP1Q8N556 730 aa14.18□□□□□ -0.14
UBBP4-201ENST00000583708 ARHGEF12Q9NZN5 1544 aa14.17□□□□□ -0.14
UBBP4-201ENST00000583708 PTPN23Q9H3S7 1636 aa14.17□□□□□ -0.14
UBBP4-201ENST00000583708 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
UBBP4-201ENST00000583708 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
UBBP4-201ENST00000583708 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
UBBP4-201ENST00000583708 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
UBBP4-201ENST00000583708 KDM5CP41229 1560 aa14.15□□□□□ -0.14
UBBP4-201ENST00000583708 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
UBBP4-201ENST00000583708 SHANK2Q9UPX8 1470 aa14.13□□□□□ -0.15
UBBP4-201ENST00000583708 RICTORQ6R327 1708 aa14.13□□□□□ -0.15
UBBP4-201ENST00000583708 MYT1LQ9UL68 1186 aa14.12□□□□□ -0.15
UBBP4-201ENST00000583708 ABCC5O15440 1437 aa14.12□□□□□ -0.15
UBBP4-201ENST00000583708 ACIN1Q9UKV3 1341 aaKnown RBP14.12□□□□□ -0.15
UBBP4-201ENST00000583708 DAPK1P53355 1430 aa14.11□□□□□ -0.15
UBBP4-201ENST00000583708 ROCK1Q13464 1354 aa14.1□□□□□ -0.15
UBBP4-201ENST00000583708 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
UBBP4-201ENST00000583708 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
UBBP4-201ENST00000583708 ATP10AO60312 1499 aa14.1□□□□□ -0.15
UBBP4-201ENST00000583708 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
UBBP4-201ENST00000583708 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
UBBP4-201ENST00000583708 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
UBBP4-201ENST00000583708 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.16
UBBP4-201ENST00000583708 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
UBBP4-201ENST00000583708 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
UBBP4-201ENST00000583708 DHX29Q7Z478 1369 aaKnown RBP14.07□□□□□ -0.16
UBBP4-201ENST00000583708 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
UBBP4-201ENST00000583708 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
UBBP4-201ENST00000583708 REREQ9P2R6 1566 aa14.06□□□□□ -0.16
UBBP4-201ENST00000583708 NCOA1Q15788 1441 aa14.06□□□□□ -0.16
UBBP4-201ENST00000583708 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
UBBP4-201ENST00000583708 ARHGEF40Q8TER5 1519 aa14.04□□□□□ -0.16
UBBP4-201ENST00000583708 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
UBBP4-201ENST00000583708 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
UBBP4-201ENST00000583708 AGLP35573 1532 aa14.03□□□□□ -0.16
UBBP4-201ENST00000583708 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
UBBP4-201ENST00000583708 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
UBBP4-201ENST00000583708 A2MP01023 1474 aa14.02□□□□□ -0.16
UBBP4-201ENST00000583708 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
UBBP4-201ENST00000583708 KIF15Q9NS87 1388 aa14.01□□□□□ -0.17
UBBP4-201ENST00000583708 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
UBBP4-201ENST00000583708 HRCP23327 699 aa14□□□□□ -0.17
UBBP4-201ENST00000583708 ITGAEP38570 1179 aa14□□□□□ -0.17
UBBP4-201ENST00000583708 RRP7BPQ9NSQ0 103 aa14□□□□□ -0.17
UBBP4-201ENST00000583708 CROCC2H7BZ55 1655 aa14□□□□□ -0.17
UBBP4-201ENST00000583708 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
UBBP4-201ENST00000583708 PTPRKQ15262 1439 aa13.99□□□□□ -0.17
UBBP4-201ENST00000583708 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
UBBP4-201ENST00000583708 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
UBBP4-201ENST00000583708 ARID4BQ4LE39 1312 aaPredicted RBP13.97□□□□□ -0.17
UBBP4-201ENST00000583708 ANKRD50Q9ULJ7 1429 aa13.97□□□□□ -0.17
UBBP4-201ENST00000583708 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
UBBP4-201ENST00000583708 HFM1A2PYH4 1435 aa13.96□□□□□ -0.18
UBBP4-201ENST00000583708 KIF3BO15066 747 aa13.95□□□□□ -0.18
UBBP4-201ENST00000583708 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
UBBP4-201ENST00000583708 NAIPQ13075 1403 aa13.93□□□□□ -0.18
UBBP4-201ENST00000583708 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
UBBP4-201ENST00000583708 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
UBBP4-201ENST00000583708 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
UBBP4-201ENST00000583708 CNTLNQ9NXG0 1405 aa13.92□□□□□ -0.18
UBBP4-201ENST00000583708 KANK1Q14678 1352 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms