RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 ABCC2Q92887 1545 aa25.13■■□□□ 1.61
ERBB2-212ENST00000582788 GPATCH8Q9UKJ3 1502 aaKnown RBP25.13■■□□□ 1.61
ERBB2-212ENST00000582788 ITSN2Q9NZM3 1697 aa25.12■■□□□ 1.61
ERBB2-212ENST00000582788 NAIPQ13075 1403 aa25.1■■□□□ 1.61
ERBB2-212ENST00000582788 ZNF644Q9H582 1327 aaPredicted RBP25.1■■□□□ 1.61
ERBB2-212ENST00000582788 ABCC10Q5T3U5 1492 aa25.1■■□□□ 1.61
ERBB2-212ENST00000582788 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
ERBB2-212ENST00000582788 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
ERBB2-212ENST00000582788 CHIC2Q9UKJ5 165 aa25.07■■□□□ 1.6
ERBB2-212ENST00000582788 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
ERBB2-212ENST00000582788 DNMT1P26358 1616 aaKnown RBP25.06■■□□□ 1.6
ERBB2-212ENST00000582788 DAPK1P53355 1430 aa25.05■■□□□ 1.6
ERBB2-212ENST00000582788 CDC42BPAQ5VT25 1732 aa25.05■■□□□ 1.6
ERBB2-212ENST00000582788 CAMSAP2Q08AD1 1489 aa25.04■■□□□ 1.6
ERBB2-212ENST00000582788 ABCC5O15440 1437 aa25.02■■□□□ 1.6
ERBB2-212ENST00000582788 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
ERBB2-212ENST00000582788 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
ERBB2-212ENST00000582788 RRP7BPQ9NSQ0 103 aa25.02■■□□□ 1.6
ERBB2-212ENST00000582788 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
ERBB2-212ENST00000582788 ZNF777Q9ULD5 760 aaPredicted RBP24.97■■□□□ 1.59
ERBB2-212ENST00000582788 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
ERBB2-212ENST00000582788 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
ERBB2-212ENST00000582788 ROCK1Q13464 1354 aa24.94■■□□□ 1.58
ERBB2-212ENST00000582788 KDM6BO15054 1643 aa24.93■■□□□ 1.58
ERBB2-212ENST00000582788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.9■■□□□ 1.58
ERBB2-212ENST00000582788 TTC37Q6PGP7 1564 aa24.9■■□□□ 1.58
ERBB2-212ENST00000582788 PREX2Q70Z35 1606 aa24.89■■□□□ 1.58
ERBB2-212ENST00000582788 CDC42BPBQ9Y5S2 1711 aa24.89■■□□□ 1.58
ERBB2-212ENST00000582788 CROCC2H7BZ55 1655 aa24.89■■□□□ 1.57
ERBB2-212ENST00000582788 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
ERBB2-212ENST00000582788 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
ERBB2-212ENST00000582788 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
ERBB2-212ENST00000582788 SAMD9LQ8IVG5 1584 aa24.83■■□□□ 1.57
ERBB2-212ENST00000582788 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
ERBB2-212ENST00000582788 NCOA1Q15788 1441 aa24.82■■□□□ 1.56
ERBB2-212ENST00000582788 MYO5CQ9NQX4 1742 aa24.8■■□□□ 1.56
ERBB2-212ENST00000582788 MBD5Q9P267 1494 aa24.79■■□□□ 1.56
ERBB2-212ENST00000582788 ARHGEF5Q12774 1597 aa24.78■■□□□ 1.56
ERBB2-212ENST00000582788 SHANK2Q9UPX8 1470 aa24.78■■□□□ 1.56
ERBB2-212ENST00000582788 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
ERBB2-212ENST00000582788 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
ERBB2-212ENST00000582788 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
ERBB2-212ENST00000582788 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
ERBB2-212ENST00000582788 ANKRD30AQ9BXX3 1397 aa24.75■■□□□ 1.55
ERBB2-212ENST00000582788 C9orf84Q5VXU9 1444 aa24.75■■□□□ 1.55
ERBB2-212ENST00000582788 PLCH2O75038 1416 aa24.72■■□□□ 1.55
ERBB2-212ENST00000582788 WDR7Q9Y4E6 1490 aa24.71■■□□□ 1.55
ERBB2-212ENST00000582788 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
ERBB2-212ENST00000582788 CCDC141Q6ZP82 1450 aa24.71■■□□□ 1.55
ERBB2-212ENST00000582788 TSPY4P0CV99 314 aa24.71■■□□□ 1.55
ERBB2-212ENST00000582788 TSPY10P0CW01 314 aa24.71■■□□□ 1.55
ERBB2-212ENST00000582788 MPHOSPH9Q99550 1183 aa24.69■■□□□ 1.54
ERBB2-212ENST00000582788 TIMELESSQ9UNS1 1208 aa24.69■■□□□ 1.54
ERBB2-212ENST00000582788 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
ERBB2-212ENST00000582788 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
ERBB2-212ENST00000582788 KIAA1107Q9UPP5 1409 aa24.65■■□□□ 1.54
ERBB2-212ENST00000582788 PLEKHH2Q8IVE3 1493 aa24.64■■□□□ 1.54
ERBB2-212ENST00000582788 ASXL2Q76L83 1435 aa24.64■■□□□ 1.54
ERBB2-212ENST00000582788 ARHGEF12Q9NZN5 1544 aa24.63■■□□□ 1.53
ERBB2-212ENST00000582788 EFCAB2Q5VUJ9 269 aa24.62■■□□□ 1.53
ERBB2-212ENST00000582788 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
ERBB2-212ENST00000582788 MAST1Q9Y2H9 1570 aa24.6■■□□□ 1.53
ERBB2-212ENST00000582788 ARAP3Q8WWN8 1544 aa24.6■■□□□ 1.53
ERBB2-212ENST00000582788 ABCA9Q8IUA7 1624 aa24.6■■□□□ 1.53
ERBB2-212ENST00000582788 PZPP20742 1482 aa24.59■■□□□ 1.53
ERBB2-212ENST00000582788 NPM1P06748 294 aaKnown RBP eCLIP24.59■■□□□ 1.53
ERBB2-212ENST00000582788 FOXD1Q16676 465 aa24.59■■□□□ 1.53
ERBB2-212ENST00000582788 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
ERBB2-212ENST00000582788 ABCC1P33527 1531 aa24.58■■□□□ 1.53
ERBB2-212ENST00000582788 SLC4A1APQ9BWU0 796 aaKnown RBP24.57■■□□□ 1.52
ERBB2-212ENST00000582788 PPP1R15AO75807 674 aaPredicted RBP24.57■■□□□ 1.52
ERBB2-212ENST00000582788 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
ERBB2-212ENST00000582788 SUPT16HQ9Y5B9 1047 aaKnown RBP24.53■■□□□ 1.52
ERBB2-212ENST00000582788 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
ERBB2-212ENST00000582788 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
ERBB2-212ENST00000582788 PLXNC1O60486 1568 aa24.51■■□□□ 1.51
ERBB2-212ENST00000582788 FANCAO15360 1455 aa24.49■■□□□ 1.51
ERBB2-212ENST00000582788 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
ERBB2-212ENST00000582788 NUP155O75694 1391 aa24.47■■□□□ 1.51
ERBB2-212ENST00000582788 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
ERBB2-212ENST00000582788 RPRD2Q5VT52 1461 aaKnown RBP24.44■■□□□ 1.5
ERBB2-212ENST00000582788 PKD2Q13563 968 aa24.43■■□□□ 1.5
ERBB2-212ENST00000582788 AFAP1Q8N556 730 aa24.42■■□□□ 1.5
ERBB2-212ENST00000582788 DUOX2Q9NRD8 1548 aa24.41■■□□□ 1.5
ERBB2-212ENST00000582788 DIP2BQ9P265 1576 aa24.41■■□□□ 1.5
ERBB2-212ENST00000582788 ADGRL1O94910 1474 aa24.39■■□□□ 1.5
ERBB2-212ENST00000582788 UNC13BO14795 1591 aa24.38■■□□□ 1.49
ERBB2-212ENST00000582788 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
ERBB2-212ENST00000582788 RTEL1-TNFRSF6BF6WH68 1400 aa24.38■■□□□ 1.49
ERBB2-212ENST00000582788 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
ERBB2-212ENST00000582788 SCAPERQ9BY12 1400 aa24.37■■□□□ 1.49
ERBB2-212ENST00000582788 FAM135AQ9P2D6 1515 aa24.36■■□□□ 1.49
ERBB2-212ENST00000582788 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
ERBB2-212ENST00000582788 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
ERBB2-212ENST00000582788 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
ERBB2-212ENST00000582788 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
ERBB2-212ENST00000582788 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
ERBB2-212ENST00000582788 INO80Q9ULG1 1556 aaPredicted RBP24.32■■□□□ 1.48
ERBB2-212ENST00000582788 FAM69CQ0P6D2 419 aa24.32■■□□□ 1.48
ERBB2-212ENST00000582788 ATP7AQ04656 1500 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms