RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 ITSN2Q9NZM3 1697 aa19.44■□□□□ 0.7
GGA3-214ENST00000582717 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
GGA3-214ENST00000582717 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
GGA3-214ENST00000582717 ATP10BO94823 1461 aa19.43■□□□□ 0.7
GGA3-214ENST00000582717 ABCC5O15440 1437 aa19.42■□□□□ 0.7
GGA3-214ENST00000582717 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
GGA3-214ENST00000582717 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
GGA3-214ENST00000582717 PTPRGP23470 1445 aa19.4■□□□□ 0.7
GGA3-214ENST00000582717 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
GGA3-214ENST00000582717 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
GGA3-214ENST00000582717 DENND4BO75064 1496 aaPredicted RBP19.36■□□□□ 0.69
GGA3-214ENST00000582717 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
GGA3-214ENST00000582717 CDC42BPAQ5VT25 1732 aa19.36■□□□□ 0.69
GGA3-214ENST00000582717 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
GGA3-214ENST00000582717 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
GGA3-214ENST00000582717 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
GGA3-214ENST00000582717 TSHZ2Q9NRE2 1034 aa19.34■□□□□ 0.69
GGA3-214ENST00000582717 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
GGA3-214ENST00000582717 ADGBQ8N7X0 1667 aa19.31■□□□□ 0.68
GGA3-214ENST00000582717 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
GGA3-214ENST00000582717 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
GGA3-214ENST00000582717 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
GGA3-214ENST00000582717 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
GGA3-214ENST00000582717 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
GGA3-214ENST00000582717 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
GGA3-214ENST00000582717 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
GGA3-214ENST00000582717 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
GGA3-214ENST00000582717 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
GGA3-214ENST00000582717 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
GGA3-214ENST00000582717 ANP32EQ9BTT0 268 aa19.21■□□□□ 0.67
GGA3-214ENST00000582717 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
GGA3-214ENST00000582717 PREX2Q70Z35 1606 aa19.2■□□□□ 0.66
GGA3-214ENST00000582717 SHANK2Q9UPX8 1470 aa19.19■□□□□ 0.66
GGA3-214ENST00000582717 FOXD1Q16676 465 aa19.18■□□□□ 0.66
GGA3-214ENST00000582717 TTC37Q6PGP7 1564 aa19.17■□□□□ 0.66
GGA3-214ENST00000582717 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
GGA3-214ENST00000582717 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
GGA3-214ENST00000582717 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
GGA3-214ENST00000582717 C9orf84Q5VXU9 1444 aa19.16■□□□□ 0.66
GGA3-214ENST00000582717 PZPP20742 1482 aa19.16■□□□□ 0.66
GGA3-214ENST00000582717 ARHGEF5Q12774 1597 aa19.16■□□□□ 0.66
GGA3-214ENST00000582717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
GGA3-214ENST00000582717 ANKRD30BQ9BXX2 1392 aa19.15■□□□□ 0.66
GGA3-214ENST00000582717 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
GGA3-214ENST00000582717 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
GGA3-214ENST00000582717 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
GGA3-214ENST00000582717 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
GGA3-214ENST00000582717 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
GGA3-214ENST00000582717 DDX10Q13206 875 aaKnown RBP19.12■□□□□ 0.65
GGA3-214ENST00000582717 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
GGA3-214ENST00000582717 UHRF1BP1LA0JNW5 1464 aa19.11■□□□□ 0.65
GGA3-214ENST00000582717 HNRNPMP52272 730 aaKnown RBP eCLIP19.11■□□□□ 0.65
GGA3-214ENST00000582717 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
GGA3-214ENST00000582717 NEFLP07196 543 aa19.09■□□□□ 0.65
GGA3-214ENST00000582717 FKBP8Q14318 412 aa19.09■□□□□ 0.65
GGA3-214ENST00000582717 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
GGA3-214ENST00000582717 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
GGA3-214ENST00000582717 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.65
GGA3-214ENST00000582717 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
GGA3-214ENST00000582717 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
GGA3-214ENST00000582717 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
GGA3-214ENST00000582717 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
GGA3-214ENST00000582717 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
GGA3-214ENST00000582717 KIF15Q9NS87 1388 aa19.05■□□□□ 0.64
GGA3-214ENST00000582717 ANP32CO43423 234 aa19.04■□□□□ 0.64
GGA3-214ENST00000582717 KIAA1107Q9UPP5 1409 aa19.03■□□□□ 0.64
GGA3-214ENST00000582717 BCANQ96GW7 911 aa19.02■□□□□ 0.64
GGA3-214ENST00000582717 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.64
GGA3-214ENST00000582717 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
GGA3-214ENST00000582717 PKD2Q13563 968 aa18.99■□□□□ 0.63
GGA3-214ENST00000582717 NUP155O75694 1391 aa18.99■□□□□ 0.63
GGA3-214ENST00000582717 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
GGA3-214ENST00000582717 PLCH2O75038 1416 aa18.97■□□□□ 0.63
GGA3-214ENST00000582717 ARHGEF12Q9NZN5 1544 aa18.97■□□□□ 0.63
GGA3-214ENST00000582717 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
GGA3-214ENST00000582717 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
GGA3-214ENST00000582717 HSPA5P11021 654 aaKnown RBP18.94■□□□□ 0.62
GGA3-214ENST00000582717 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
GGA3-214ENST00000582717 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
GGA3-214ENST00000582717 ABCC1P33527 1531 aa18.93■□□□□ 0.62
GGA3-214ENST00000582717 UNC13BO14795 1591 aa18.91■□□□□ 0.62
GGA3-214ENST00000582717 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
GGA3-214ENST00000582717 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
GGA3-214ENST00000582717 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.61
GGA3-214ENST00000582717 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.61
GGA3-214ENST00000582717 ARAP3Q8WWN8 1544 aa18.87■□□□□ 0.61
GGA3-214ENST00000582717 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
GGA3-214ENST00000582717 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
GGA3-214ENST00000582717 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
GGA3-214ENST00000582717 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
GGA3-214ENST00000582717 OSCARQ8IYS5 282 aa18.83■□□□□ 0.61
GGA3-214ENST00000582717 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
GGA3-214ENST00000582717 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
GGA3-214ENST00000582717 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
GGA3-214ENST00000582717 ASXL2Q76L83 1435 aa18.8■□□□□ 0.6
GGA3-214ENST00000582717 MAGI2Q86UL8 1455 aa18.8■□□□□ 0.6
GGA3-214ENST00000582717 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
GGA3-214ENST00000582717 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
GGA3-214ENST00000582717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■□□ 16.1
GGA3-214ENST00000582717 ERICH6BQ5W0A0 696 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms