RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 MADDQ8WXG6 1647 aa10.86□□□□□ -0.67
TVP23B-210ENST00000582288 ATP10BO94823 1461 aa10.86□□□□□ -0.67
TVP23B-210ENST00000582288 RAPGEF3O95398 923 aa10.83□□□□□ -0.68
TVP23B-210ENST00000582288 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
TVP23B-210ENST00000582288 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
TVP23B-210ENST00000582288 FRMPD1Q5SYB0 1578 aa10.82□□□□□ -0.68
TVP23B-210ENST00000582288 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
TVP23B-210ENST00000582288 ARHGEF40Q8TER5 1519 aa10.81□□□□□ -0.68
TVP23B-210ENST00000582288 POGZQ7Z3K3 1410 aa10.81□□□□□ -0.68
TVP23B-210ENST00000582288 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
TVP23B-210ENST00000582288 SOCS7O14512 581 aa10.8□□□□□ -0.68
TVP23B-210ENST00000582288 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
TVP23B-210ENST00000582288 FHOD3Q2V2M9 1422 aa10.79□□□□□ -0.68
TVP23B-210ENST00000582288 FANCAO15360 1455 aa10.79□□□□□ -0.68
TVP23B-210ENST00000582288 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
TVP23B-210ENST00000582288 RIMS1Q86UR5 1692 aaKnown RBP10.79□□□□□ -0.68
TVP23B-210ENST00000582288 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
TVP23B-210ENST00000582288 AKNAQ7Z591 1439 aa10.77□□□□□ -0.68
TVP23B-210ENST00000582288 POLA2Q14181 598 aa10.77□□□□□ -0.69
TVP23B-210ENST00000582288 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
TVP23B-210ENST00000582288 ZMYM4Q5VZL5 1548 aa10.77□□□□□ -0.69
TVP23B-210ENST00000582288 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.69
TVP23B-210ENST00000582288 HSPA2P54652 639 aa10.76□□□□□ -0.69
TVP23B-210ENST00000582288 TTC37Q6PGP7 1564 aa10.75□□□□□ -0.69
TVP23B-210ENST00000582288 RAPGEF6Q8TEU7 1601 aa10.75□□□□□ -0.69
TVP23B-210ENST00000582288 EFCAB5A4FU69 1503 aa10.74□□□□□ -0.69
TVP23B-210ENST00000582288 SAMD9Q5K651 1589 aa10.74□□□□□ -0.69
TVP23B-210ENST00000582288 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
TVP23B-210ENST00000582288 ILDR2Q71H61 639 aa10.73□□□□□ -0.69
TVP23B-210ENST00000582288 ZFYVE16Q7Z3T8 1539 aa10.73□□□□□ -0.69
TVP23B-210ENST00000582288 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
TVP23B-210ENST00000582288 YEATS2Q9ULM3 1422 aa10.72□□□□□ -0.69
TVP23B-210ENST00000582288 NUP153P49790 1475 aaKnown RBP10.71□□□□□ -0.69
TVP23B-210ENST00000582288 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
TVP23B-210ENST00000582288 PLEKHD1A6NEE1 506 aa10.7□□□□□ -0.7
TVP23B-210ENST00000582288 FER1L4A9Z1Z3 1794 aa10.7□□□□□ -0.7
TVP23B-210ENST00000582288 ARHGEF12Q9NZN5 1544 aa10.69□□□□□ -0.7
TVP23B-210ENST00000582288 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
TVP23B-210ENST00000582288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
TVP23B-210ENST00000582288 SIGLEC1Q9BZZ2 1709 aa10.68□□□□□ -0.7
TVP23B-210ENST00000582288 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
TVP23B-210ENST00000582288 IQSEC2Q5JU85 1478 aa10.68□□□□□ -0.7
TVP23B-210ENST00000582288 HECW1Q76N89 1606 aa10.67□□□□□ -0.7
TVP23B-210ENST00000582288 SPATA31D1Q6ZQQ2 1576 aa10.67□□□□□ -0.7
TVP23B-210ENST00000582288 ATP10AO60312 1499 aa10.67□□□□□ -0.7
TVP23B-210ENST00000582288 PTPRTO14522 1441 aa10.67□□□□□ -0.7
TVP23B-210ENST00000582288 STRCQ7RTU9 1775 aa10.66□□□□□ -0.7
TVP23B-210ENST00000582288 C9orf84Q5VXU9 1444 aa10.66□□□□□ -0.7
TVP23B-210ENST00000582288 PLCH2O75038 1416 aa10.65□□□□□ -0.7
TVP23B-210ENST00000582288 UHRF1BP1Q6BDS2 1440 aa10.64□□□□□ -0.71
TVP23B-210ENST00000582288 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
TVP23B-210ENST00000582288 MLECQ14165 292 aa10.63□□□□□ -0.71
TVP23B-210ENST00000582288 SCAPERQ9BY12 1400 aa10.63□□□□□ -0.71
TVP23B-210ENST00000582288 SETD1BQ9UPS6 1966 aaKnown RBP10.61□□□□□ -0.71
TVP23B-210ENST00000582288 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
TVP23B-210ENST00000582288 LTBP4Q8N2S1 1624 aa10.6□□□□□ -0.71
TVP23B-210ENST00000582288 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
TVP23B-210ENST00000582288 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
TVP23B-210ENST00000582288 ZNF518AQ6AHZ1 1483 aa10.6□□□□□ -0.71
TVP23B-210ENST00000582288 CEBPAP49715 358 aaPredicted RBP10.59□□□□□ -0.71
TVP23B-210ENST00000582288 EFCAB2Q5VUJ9 269 aa10.59□□□□□ -0.71
TVP23B-210ENST00000582288 KDM5CP41229 1560 aa10.58□□□□□ -0.72
TVP23B-210ENST00000582288 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
TVP23B-210ENST00000582288 PITPNM1O00562 1244 aa10.56□□□□□ -0.72
TVP23B-210ENST00000582288 AGLP35573 1532 aa10.56□□□□□ -0.72
TVP23B-210ENST00000582288 EEA1Q15075 1411 aa10.56□□□□□ -0.72
TVP23B-210ENST00000582288 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
TVP23B-210ENST00000582288 C3P01024 1663 aa10.55□□□□□ -0.72
TVP23B-210ENST00000582288 LHX8Q68G74 356 aa10.55□□□□□ -0.72
TVP23B-210ENST00000582288 NCOA1Q15788 1441 aa10.55□□□□□ -0.72
TVP23B-210ENST00000582288 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
TVP23B-210ENST00000582288 EVX2Q03828 476 aa10.54□□□□□ -0.72
TVP23B-210ENST00000582288 CNTLNQ9NXG0 1405 aa10.54□□□□□ -0.72
TVP23B-210ENST00000582288 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
TVP23B-210ENST00000582288 DIP2CQ9Y2E4 1556 aa10.53□□□□□ -0.72
TVP23B-210ENST00000582288 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
TVP23B-210ENST00000582288 NPATQ14207 1427 aa10.52□□□□□ -0.73
TVP23B-210ENST00000582288 AFAP1Q8N556 730 aa10.52□□□□□ -0.73
TVP23B-210ENST00000582288 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
TVP23B-210ENST00000582288 CDK13Q14004 1512 aaKnown RBP10.52□□□□□ -0.73
TVP23B-210ENST00000582288 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
TVP23B-210ENST00000582288 KIF14Q15058 1648 aa10.5□□□□□ -0.73
TVP23B-210ENST00000582288 ARHGAP5Q13017 1502 aa10.49□□□□□ -0.73
TVP23B-210ENST00000582288 ABCA6Q8N139 1617 aa10.49□□□□□ -0.73
TVP23B-210ENST00000582288 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
TVP23B-210ENST00000582288 MROH2AA6NES4 1674 aa10.49□□□□□ -0.73
TVP23B-210ENST00000582288 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
TVP23B-210ENST00000582288 CAMSAP1Q5T5Y3 1602 aa10.48□□□□□ -0.73
TVP23B-210ENST00000582288 CLIP1P30622 1438 aa10.48□□□□□ -0.73
TVP23B-210ENST00000582288 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
TVP23B-210ENST00000582288 RANGAP1P46060 587 aaPredicted RBP10.47□□□□□ -0.73
TVP23B-210ENST00000582288 PKD2Q13563 968 aa10.47□□□□□ -0.73
TVP23B-210ENST00000582288 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
TVP23B-210ENST00000582288 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.73
TVP23B-210ENST00000582288 ABCC1P33527 1531 aa10.45□□□□□ -0.74
TVP23B-210ENST00000582288 TCOF1Q13428 1488 aaKnown RBP10.44□□□□□ -0.74
TVP23B-210ENST00000582288 ZMYM3Q14202 1370 aa10.44□□□□□ -0.74
TVP23B-210ENST00000582288 ZNF335Q9H4Z2 1342 aaPredicted RBP10.44□□□□□ -0.74
TVP23B-210ENST00000582288 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
TVP23B-210ENST00000582288 ZNF142P52746 1687 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms