RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
DDX42-213ENST00000581477 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
DDX42-213ENST00000581477 SAMD9Q5K651 1589 aa11.33□□□□□ -0.6
DDX42-213ENST00000581477 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
DDX42-213ENST00000581477 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
DDX42-213ENST00000581477 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
DDX42-213ENST00000581477 C7P10643 843 aa11.31□□□□□ -0.6
DDX42-213ENST00000581477 SLC39A7Q92504 469 aa11.31□□□□□ -0.6
DDX42-213ENST00000581477 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
DDX42-213ENST00000581477 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
DDX42-213ENST00000581477 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
DDX42-213ENST00000581477 KIAA0556O60303 1618 aa11.27□□□□□ -0.6
DDX42-213ENST00000581477 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
DDX42-213ENST00000581477 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
DDX42-213ENST00000581477 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
DDX42-213ENST00000581477 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
DDX42-213ENST00000581477 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
DDX42-213ENST00000581477 FHOD3Q2V2M9 1422 aa11.24□□□□□ -0.61
DDX42-213ENST00000581477 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
DDX42-213ENST00000581477 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
DDX42-213ENST00000581477 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
DDX42-213ENST00000581477 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
DDX42-213ENST00000581477 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
DDX42-213ENST00000581477 PTPRGP23470 1445 aa11.18□□□□□ -0.62
DDX42-213ENST00000581477 FYCO1Q9BQS8 1478 aa11.17□□□□□ -0.62
DDX42-213ENST00000581477 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
DDX42-213ENST00000581477 MMRN1Q13201 1228 aa11.16□□□□□ -0.62
DDX42-213ENST00000581477 PCF11O94913 1555 aaKnown RBP11.16□□□□□ -0.62
DDX42-213ENST00000581477 ABCA8O94911 1581 aa11.15□□□□□ -0.62
DDX42-213ENST00000581477 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
DDX42-213ENST00000581477 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
DDX42-213ENST00000581477 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
DDX42-213ENST00000581477 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
DDX42-213ENST00000581477 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
DDX42-213ENST00000581477 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
DDX42-213ENST00000581477 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
DDX42-213ENST00000581477 UHRF1BP1LA0JNW5 1464 aa11.11□□□□□ -0.63
DDX42-213ENST00000581477 NUP153P49790 1475 aaKnown RBP11.11□□□□□ -0.63
DDX42-213ENST00000581477 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
DDX42-213ENST00000581477 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
DDX42-213ENST00000581477 TIAM1Q13009 1591 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 CCDC18Q5T9S5 1454 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
DDX42-213ENST00000581477 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
DDX42-213ENST00000581477 CFAP43Q8NDM7 1665 aa11.08□□□□□ -0.64
DDX42-213ENST00000581477 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
DDX42-213ENST00000581477 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
DDX42-213ENST00000581477 ATP10BO94823 1461 aa11.06□□□□□ -0.64
DDX42-213ENST00000581477 KDM5BQ9UGL1 1544 aa11.05□□□□□ -0.64
DDX42-213ENST00000581477 KANK4Q5T7N3 995 aaPredicted RBP11.05□□□□□ -0.64
DDX42-213ENST00000581477 LRRC9Q6ZRR7 1453 aa11.05□□□□□ -0.64
DDX42-213ENST00000581477 CDK13Q14004 1512 aaKnown RBP11.04□□□□□ -0.64
DDX42-213ENST00000581477 MS4A3Q96HJ5 214 aa11.04□□□□□ -0.64
DDX42-213ENST00000581477 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
DDX42-213ENST00000581477 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
DDX42-213ENST00000581477 MAGI3Q5TCQ9 1506 aa11.01□□□□□ -0.65
DDX42-213ENST00000581477 ZCCHC11Q5TAX3 1644 aaKnown RBP11□□□□□ -0.65
DDX42-213ENST00000581477 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
DDX42-213ENST00000581477 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
DDX42-213ENST00000581477 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
DDX42-213ENST00000581477 PLEKHD1A6NEE1 506 aa10.99□□□□□ -0.65
DDX42-213ENST00000581477 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
DDX42-213ENST00000581477 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
DDX42-213ENST00000581477 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
DDX42-213ENST00000581477 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
DDX42-213ENST00000581477 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDX42-213ENST00000581477 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
DDX42-213ENST00000581477 SUPT6HQ7KZ85 1726 aaKnown RBP10.95□□□□□ -0.66
DDX42-213ENST00000581477 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
DDX42-213ENST00000581477 ST18O60284 1047 aa10.94□□□□□ -0.66
DDX42-213ENST00000581477 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
DDX42-213ENST00000581477 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
DDX42-213ENST00000581477 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
DDX42-213ENST00000581477 WDR7Q9Y4E6 1490 aa10.92□□□□□ -0.66
DDX42-213ENST00000581477 ASXL2Q76L83 1435 aa10.92□□□□□ -0.66
DDX42-213ENST00000581477 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
DDX42-213ENST00000581477 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
DDX42-213ENST00000581477 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
DDX42-213ENST00000581477 KIF14Q15058 1648 aa10.91□□□□□ -0.66
DDX42-213ENST00000581477 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
DDX42-213ENST00000581477 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
DDX42-213ENST00000581477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX42-213ENST00000581477 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
DDX42-213ENST00000581477 GPATCH8Q9UKJ3 1502 aaKnown RBP10.88□□□□□ -0.67
DDX42-213ENST00000581477 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
DDX42-213ENST00000581477 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
DDX42-213ENST00000581477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
DDX42-213ENST00000581477 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
DDX42-213ENST00000581477 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
DDX42-213ENST00000581477 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
DDX42-213ENST00000581477 CDC42BPAQ5VT25 1732 aa10.85□□□□□ -0.67
DDX42-213ENST00000581477 TTC37Q6PGP7 1564 aa10.85□□□□□ -0.67
DDX42-213ENST00000581477 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
DDX42-213ENST00000581477 TCOF1Q13428 1488 aaKnown RBP10.84□□□□□ -0.67
DDX42-213ENST00000581477 GLI2P10070 1586 aa10.84□□□□□ -0.67
DDX42-213ENST00000581477 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
DDX42-213ENST00000581477 PLCH2O75038 1416 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms