RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 DAPK1P53355 1430 aa22.04■■□□□ 1.12
CDK5RAP3-218ENST00000580391 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-218ENST00000580391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.123e-9■■□□□ 12.3
CDK5RAP3-218ENST00000580391 NAIPQ13075 1403 aa22.02■■□□□ 1.12
CDK5RAP3-218ENST00000580391 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
CDK5RAP3-218ENST00000580391 ABCC5O15440 1437 aa22■■□□□ 1.11
CDK5RAP3-218ENST00000580391 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
CDK5RAP3-218ENST00000580391 ADGBQ8N7X0 1667 aa21.98■■□□□ 1.11
CDK5RAP3-218ENST00000580391 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
CDK5RAP3-218ENST00000580391 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
CDK5RAP3-218ENST00000580391 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
CDK5RAP3-218ENST00000580391 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.11
CDK5RAP3-218ENST00000580391 KDM6BO15054 1643 aa21.95■■□□□ 1.1
CDK5RAP3-218ENST00000580391 CLSPNQ9HAW4 1339 aa21.95■■□□□ 1.1
CDK5RAP3-218ENST00000580391 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CDK5RAP3-218ENST00000580391 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
CDK5RAP3-218ENST00000580391 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
CDK5RAP3-218ENST00000580391 ROCK1Q13464 1354 aa21.9■■□□□ 1.1
CDK5RAP3-218ENST00000580391 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
CDK5RAP3-218ENST00000580391 ARHGEF5Q12774 1597 aa21.89■■□□□ 1.09
CDK5RAP3-218ENST00000580391 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
CDK5RAP3-218ENST00000580391 SHANK2Q9UPX8 1470 aa21.86■■□□□ 1.09
CDK5RAP3-218ENST00000580391 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
CDK5RAP3-218ENST00000580391 MBD5Q9P267 1494 aa21.84■■□□□ 1.09
CDK5RAP3-218ENST00000580391 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
CDK5RAP3-218ENST00000580391 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.09
CDK5RAP3-218ENST00000580391 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.09
CDK5RAP3-218ENST00000580391 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.09
CDK5RAP3-218ENST00000580391 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
CDK5RAP3-218ENST00000580391 PLCH2O75038 1416 aa21.81■■□□□ 1.08
CDK5RAP3-218ENST00000580391 CCDC141Q6ZP82 1450 aa21.81■■□□□ 1.08
CDK5RAP3-218ENST00000580391 NCOA1Q15788 1441 aa21.81■■□□□ 1.08
CDK5RAP3-218ENST00000580391 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
CDK5RAP3-218ENST00000580391 HNRNPMP52272 730 aaKnown RBP eCLIP21.78■■□□□ 1.084e-8■■□□□ 12.7
CDK5RAP3-218ENST00000580391 ARAP3Q8WWN8 1544 aa21.77■■□□□ 1.08
CDK5RAP3-218ENST00000580391 ABCC1P33527 1531 aa21.77■■□□□ 1.08
CDK5RAP3-218ENST00000580391 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
CDK5RAP3-218ENST00000580391 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
CDK5RAP3-218ENST00000580391 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
CDK5RAP3-218ENST00000580391 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
CDK5RAP3-218ENST00000580391 DENND4BO75064 1496 aaPredicted RBP21.73■■□□□ 1.07
CDK5RAP3-218ENST00000580391 KIAA1107Q9UPP5 1409 aa21.72■■□□□ 1.07
CDK5RAP3-218ENST00000580391 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
CDK5RAP3-218ENST00000580391 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
CDK5RAP3-218ENST00000580391 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
CDK5RAP3-218ENST00000580391 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
CDK5RAP3-218ENST00000580391 EFCAB2Q5VUJ9 269 aa21.68■■□□□ 1.06
CDK5RAP3-218ENST00000580391 SIN3AQ96ST3 1273 aa21.68■■□□□ 1.06
CDK5RAP3-218ENST00000580391 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
CDK5RAP3-218ENST00000580391 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
CDK5RAP3-218ENST00000580391 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
CDK5RAP3-218ENST00000580391 FANCAO15360 1455 aa21.66■■□□□ 1.06
CDK5RAP3-218ENST00000580391 RSPH4AQ5TD94 716 aa21.66■■□□□ 1.06
CDK5RAP3-218ENST00000580391 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
CDK5RAP3-218ENST00000580391 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
CDK5RAP3-218ENST00000580391 PZPP20742 1482 aa21.62■■□□□ 1.05
CDK5RAP3-218ENST00000580391 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
CDK5RAP3-218ENST00000580391 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
CDK5RAP3-218ENST00000580391 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
CDK5RAP3-218ENST00000580391 ADGRL1O94910 1474 aa21.58■■□□□ 1.05
CDK5RAP3-218ENST00000580391 ZFYVE16Q7Z3T8 1539 aa21.58■■□□□ 1.04
CDK5RAP3-218ENST00000580391 CFAP74Q9C0B2 1584 aa21.58■■□□□ 1.04
CDK5RAP3-218ENST00000580391 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
CDK5RAP3-218ENST00000580391 INO80Q9ULG1 1556 aaPredicted RBP21.56■■□□□ 1.04
CDK5RAP3-218ENST00000580391 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
CDK5RAP3-218ENST00000580391 UNC13BO14795 1591 aa21.54■■□□□ 1.04
CDK5RAP3-218ENST00000580391 FOXD1Q16676 465 aa21.54■■□□□ 1.04
CDK5RAP3-218ENST00000580391 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
CDK5RAP3-218ENST00000580391 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
CDK5RAP3-218ENST00000580391 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
CDK5RAP3-218ENST00000580391 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.03
CDK5RAP3-218ENST00000580391 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
CDK5RAP3-218ENST00000580391 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
CDK5RAP3-218ENST00000580391 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
CDK5RAP3-218ENST00000580391 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
CDK5RAP3-218ENST00000580391 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 TIMELESSQ9UNS1 1208 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 NUP155O75694 1391 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 SPAG9O60271 1321 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 GLI2P10070 1586 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 DIP2BQ9P265 1576 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 ERBINQ96RT1 1412 aa21.48■■□□□ 1.03
CDK5RAP3-218ENST00000580391 FAM135AQ9P2D6 1515 aa21.46■■□□□ 1.03
CDK5RAP3-218ENST00000580391 KIDINS220Q9ULH0 1771 aa21.46■■□□□ 1.03
CDK5RAP3-218ENST00000580391 IQGAP3Q86VI3 1631 aa21.45■■□□□ 1.02
CDK5RAP3-218ENST00000580391 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
CDK5RAP3-218ENST00000580391 MAGI2Q86UL8 1455 aa21.43■■□□□ 1.02
CDK5RAP3-218ENST00000580391 KDM5CP41229 1560 aa21.43■■□□□ 1.02
CDK5RAP3-218ENST00000580391 RPRD2Q5VT52 1461 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP3-218ENST00000580391 NEO1Q92859 1461 aa21.42■■□□□ 1.02
CDK5RAP3-218ENST00000580391 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
CDK5RAP3-218ENST00000580391 PKD2Q13563 968 aa21.41■■□□□ 1.02
CDK5RAP3-218ENST00000580391 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.02
CDK5RAP3-218ENST00000580391 TSPOAP1O95153 1857 aa21.39■■□□□ 1.02
CDK5RAP3-218ENST00000580391 DEPDC5O75140 1603 aa21.39■■□□□ 1.01
CDK5RAP3-218ENST00000580391 HECW2Q9P2P5 1572 aa21.39■■□□□ 1.01
CDK5RAP3-218ENST00000580391 PPRC1Q5VV67 1664 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-218ENST00000580391 RICTORQ6R327 1708 aa21.37■■□□□ 1.01
CDK5RAP3-218ENST00000580391 EIF2AK4Q9P2K8 1649 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms