RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 EFCAB5A4FU69 1503 aa5.9□□□□□ -1.47
CDH19-204ENST00000579658 ZMYM4Q5VZL5 1548 aa5.9□□□□□ -1.47
CDH19-204ENST00000579658 YEATS2Q9ULM3 1422 aa5.9□□□□□ -1.47
CDH19-204ENST00000579658 FRMPD1Q5SYB0 1578 aa5.9□□□□□ -1.47
CDH19-204ENST00000579658 CTTNBP2Q8WZ74 1663 aa5.89□□□□□ -1.47
CDH19-204ENST00000579658 MAGI2Q86UL8 1455 aa5.89□□□□□ -1.47
CDH19-204ENST00000579658 MAPK8IP2Q13387 824 aaPredicted RBP5.89□□□□□ -1.47
CDH19-204ENST00000579658 AKNAQ7Z591 1439 aa5.89□□□□□ -1.47
CDH19-204ENST00000579658 AMER1Q5JTC6 1135 aaPredicted RBP5.88□□□□□ -1.47
CDH19-204ENST00000579658 RICTORQ6R327 1708 aa5.88□□□□□ -1.47
CDH19-204ENST00000579658 FHOD3Q2V2M9 1422 aa5.87□□□□□ -1.47
CDH19-204ENST00000579658 ARID4BQ4LE39 1312 aaPredicted RBP5.87□□□□□ -1.47
CDH19-204ENST00000579658 STRCQ7RTU9 1775 aa5.86□□□□□ -1.47
CDH19-204ENST00000579658 RAPGEF2Q9Y4G8 1499 aa5.86□□□□□ -1.47
CDH19-204ENST00000579658 ZFYVE16Q7Z3T8 1539 aa5.86□□□□□ -1.47
CDH19-204ENST00000579658 DENND4BO75064 1496 aaPredicted RBP5.86□□□□□ -1.47
CDH19-204ENST00000579658 ARHGEF12Q9NZN5 1544 aa5.85□□□□□ -1.47
CDH19-204ENST00000579658 SETD1BQ9UPS6 1966 aaKnown RBP5.85□□□□□ -1.47
CDH19-204ENST00000579658 TTBK1Q5TCY1 1321 aaPredicted RBP5.85□□□□□ -1.47
CDH19-204ENST00000579658 LTBP4Q8N2S1 1624 aa5.84□□□□□ -1.47
CDH19-204ENST00000579658 UHRF1BP1Q6BDS2 1440 aa5.84□□□□□ -1.47
CDH19-204ENST00000579658 CHRDL2Q6WN34 429 aa5.84□□□□□ -1.47
CDH19-204ENST00000579658 HSPA2P54652 639 aa5.83□□□□□ -1.48
CDH19-204ENST00000579658 KCNH8Q96L42 1107 aa5.83□□□□□ -1.48
CDH19-204ENST00000579658 MED1Q15648 1581 aaPredicted RBP5.81□□□□□ -1.48
CDH19-204ENST00000579658 REREQ9P2R6 1566 aa5.81□□□□□ -1.48
CDH19-204ENST00000579658 ATP10BO94823 1461 aa5.81□□□□□ -1.48
CDH19-204ENST00000579658 C9orf84Q5VXU9 1444 aa5.81□□□□□ -1.48
CDH19-204ENST00000579658 RAPGEF6Q8TEU7 1601 aa5.8□□□□□ -1.48
CDH19-204ENST00000579658 ATP10AO60312 1499 aa5.8□□□□□ -1.48
CDH19-204ENST00000579658 RAPGEF3O95398 923 aa5.8□□□□□ -1.48
CDH19-204ENST00000579658 NCOA1Q15788 1441 aa5.79□□□□□ -1.48
CDH19-204ENST00000579658 HECW1Q76N89 1606 aa5.78□□□□□ -1.48
CDH19-204ENST00000579658 SIGLEC1Q9BZZ2 1709 aa5.78□□□□□ -1.48
CDH19-204ENST00000579658 MROH2AA6NES4 1674 aa5.78□□□□□ -1.48
CDH19-204ENST00000579658 CNTLNQ9NXG0 1405 aa5.78□□□□□ -1.48
CDH19-204ENST00000579658 AGLP35573 1532 aa5.77□□□□□ -1.48
CDH19-204ENST00000579658 C3P01024 1663 aa5.77□□□□□ -1.49
CDH19-204ENST00000579658 HOXD11P31277 338 aaPredicted RBP5.77□□□□□ -1.49
CDH19-204ENST00000579658 SAMD9Q5K651 1589 aa5.77□□□□□ -1.49
CDH19-204ENST00000579658 ZNF142P52746 1687 aaPredicted RBP5.77□□□□□ -1.49
CDH19-204ENST00000579658 PLA2R1Q13018 1463 aa5.77□□□□□ -1.49
CDH19-204ENST00000579658 NPATQ14207 1427 aa5.76□□□□□ -1.49
CDH19-204ENST00000579658 TRAPPC8Q9Y2L5 1435 aa5.76□□□□□ -1.49
CDH19-204ENST00000579658 CPS1P31327 1500 aa5.75□□□□□ -1.49
CDH19-204ENST00000579658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.74□□□□□ -1.49
CDH19-204ENST00000579658 KDM5CP41229 1560 aa5.74□□□□□ -1.49
CDH19-204ENST00000579658 ZNF518AQ6AHZ1 1483 aa5.74□□□□□ -1.49
CDH19-204ENST00000579658 UBAP1LF5GYI3 381 aa5.74□□□□□ -1.49
CDH19-204ENST00000579658 PKD2Q13563 968 aa5.74□□□□□ -1.49
CDH19-204ENST00000579658 RBM42Q9BTD8 480 aaKnown RBP5.74□□□□□ -1.49
CDH19-204ENST00000579658 MYO5CQ9NQX4 1742 aa5.73□□□□□ -1.49
CDH19-204ENST00000579658 CAMSAP1Q5T5Y3 1602 aa5.73□□□□□ -1.49
CDH19-204ENST00000579658 PPP4R3CPQ6ZMV5 832 aa5.73□□□□□ -1.49
CDH19-204ENST00000579658 SUPT6HQ7KZ85 1726 aaKnown RBP5.73□□□□□ -1.49
CDH19-204ENST00000579658 PTPRKQ15262 1439 aa5.72□□□□□ -1.49
CDH19-204ENST00000579658 PLCH2O75038 1416 aa5.72□□□□□ -1.49
CDH19-204ENST00000579658 PLEKHD1A6NEE1 506 aa5.72□□□□□ -1.49
CDH19-204ENST00000579658 NUP153P49790 1475 aaKnown RBP5.72□□□□□ -1.49
CDH19-204ENST00000579658 DIP2CQ9Y2E4 1556 aa5.72□□□□□ -1.49
CDH19-204ENST00000579658 SCAPERQ9BY12 1400 aa5.72□□□□□ -1.49
CDH19-204ENST00000579658 TOM1O60784 492 aa5.71□□□□□ -1.49
CDH19-204ENST00000579658 NPM3O75607 178 aaKnown RBP5.71□□□□□ -1.49
CDH19-204ENST00000579658 TCOF1Q13428 1488 aaKnown RBP5.71□□□□□ -1.5
CDH19-204ENST00000579658 PRXQ9BXM0 1461 aa5.71□□□□□ -1.5
CDH19-204ENST00000579658 PRKCSHP14314 528 aaPredicted RBP5.71□□□□□ -1.5
CDH19-204ENST00000579658 ESF1Q9H501 851 aaKnown RBP5.71□□□□□ -1.5
CDH19-204ENST00000579658 MLH3Q9UHC1 1453 aa5.7□□□□□ -1.5
CDH19-204ENST00000579658 MYO3AQ8NEV4 1616 aa5.7□□□□□ -1.5
CDH19-204ENST00000579658 MLECQ14165 292 aa5.7□□□□□ -1.5
CDH19-204ENST00000579658 NCBP3Q53F19 620 aaKnown RBP5.7□□□□□ -1.5
CDH19-204ENST00000579658 POLR1AO95602 1720 aaPredicted RBP5.7□□□□□ -1.5
CDH19-204ENST00000579658 DSG3P32926 999 aa5.69□□□□□ -1.5
CDH19-204ENST00000579658 EFCAB2Q5VUJ9 269 aa5.68□□□□□ -1.5
CDH19-204ENST00000579658 SYNMO15061 1565 aa5.68□□□□□ -1.5
CDH19-204ENST00000579658 CEP170BQ9Y4F5 1589 aaPredicted RBP5.68□□□□□ -1.5
CDH19-204ENST00000579658 ABCA6Q8N139 1617 aa5.68□□□□□ -1.5
CDH19-204ENST00000579658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.68□□□□□ -1.5
CDH19-204ENST00000579658 HNRNPUL2Q1KMD3 747 aaKnown RBP5.68□□□□□ -1.5
CDH19-204ENST00000579658 FAM135AQ9P2D6 1515 aa5.68□□□□□ -1.5
CDH19-204ENST00000579658 HSPA1LP34931 641 aa5.67□□□□□ -1.5
CDH19-204ENST00000579658 RNF17Q9BXT8 1623 aaKnown RBP5.67□□□□□ -1.5
CDH19-204ENST00000579658 CEBPAP49715 358 aaPredicted RBP5.67□□□□□ -1.5
CDH19-204ENST00000579658 KIF14Q15058 1648 aa5.67□□□□□ -1.5
CDH19-204ENST00000579658 ITSN2Q9NZM3 1697 aa5.66□□□□□ -1.5
CDH19-204ENST00000579658 ZNF335Q9H4Z2 1342 aaPredicted RBP5.66□□□□□ -1.5
CDH19-204ENST00000579658 A2ML1A8K2U0 1454 aa5.65□□□□□ -1.5
CDH19-204ENST00000579658 SHANK2Q9UPX8 1470 aa5.65□□□□□ -1.5
CDH19-204ENST00000579658 DEPDC5O75140 1603 aa5.65□□□□□ -1.51
CDH19-204ENST00000579658 ARHGAP5Q13017 1502 aa5.64□□□□□ -1.51
CDH19-204ENST00000579658 CLIP1P30622 1438 aa5.64□□□□□ -1.51
CDH19-204ENST00000579658 CDK11AQ9UQ88 783 aaPredicted RBP5.64□□□□□ -1.51
CDH19-204ENST00000579658 ABCC1P33527 1531 aa5.64□□□□□ -1.51
CDH19-204ENST00000579658 KIDINS220Q9ULH0 1771 aa5.63□□□□□ -1.51
CDH19-204ENST00000579658 PREX2Q70Z35 1606 aa5.63□□□□□ -1.51
CDH19-204ENST00000579658 NCKAP5LQ9HCH0 1330 aa5.63□□□□□ -1.51
CDH19-204ENST00000579658 CLTCQ00610 1675 aaKnown RBP5.63□□□□□ -1.51
CDH19-204ENST00000579658 ARID3CA6NKF2 412 aa5.63□□□□□ -1.51
CDH19-204ENST00000579658 DNMT1P26358 1616 aaKnown RBP5.63□□□□□ -1.51
CDH19-204ENST00000579658 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms