RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
SMARCD2-205ENST00000577686 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
SMARCD2-205ENST00000577686 KIF14Q15058 1648 aa23.35■■□□□ 1.33
SMARCD2-205ENST00000577686 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.33
SMARCD2-205ENST00000577686 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.32
SMARCD2-205ENST00000577686 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
SMARCD2-205ENST00000577686 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
SMARCD2-205ENST00000577686 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-205ENST00000577686 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
SMARCD2-205ENST00000577686 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
SMARCD2-205ENST00000577686 ATP10AO60312 1499 aa23.29■■□□□ 1.32
SMARCD2-205ENST00000577686 ZNF518AQ6AHZ1 1483 aa23.29■■□□□ 1.32
SMARCD2-205ENST00000577686 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
SMARCD2-205ENST00000577686 MLECQ14165 292 aa23.27■■□□□ 1.32
SMARCD2-205ENST00000577686 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
SMARCD2-205ENST00000577686 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
SMARCD2-205ENST00000577686 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
SMARCD2-205ENST00000577686 FER1L4A9Z1Z3 1794 aa23.24■■□□□ 1.31
SMARCD2-205ENST00000577686 ARHGEF12Q9NZN5 1544 aa23.2■■□□□ 1.3
SMARCD2-205ENST00000577686 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
SMARCD2-205ENST00000577686 KDM5CP41229 1560 aa23.18■■□□□ 1.3
SMARCD2-205ENST00000577686 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
SMARCD2-205ENST00000577686 HSPA2P54652 639 aa23.16■■□□□ 1.3
SMARCD2-205ENST00000577686 AFAP1Q8N556 730 aa23.14■■□□□ 1.29
SMARCD2-205ENST00000577686 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-205ENST00000577686 REREQ9P2R6 1566 aa23.12■■□□□ 1.29
SMARCD2-205ENST00000577686 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
SMARCD2-205ENST00000577686 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
SMARCD2-205ENST00000577686 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
SMARCD2-205ENST00000577686 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
SMARCD2-205ENST00000577686 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
SMARCD2-205ENST00000577686 ABCC1P33527 1531 aa23.09■■□□□ 1.29
SMARCD2-205ENST00000577686 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.28
SMARCD2-205ENST00000577686 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.28
SMARCD2-205ENST00000577686 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
SMARCD2-205ENST00000577686 CDC42BPBQ9Y5S2 1711 aa23.07■■□□□ 1.28
SMARCD2-205ENST00000577686 AGLP35573 1532 aa23.05■■□□□ 1.28
SMARCD2-205ENST00000577686 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
SMARCD2-205ENST00000577686 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
SMARCD2-205ENST00000577686 TRAPPC8Q9Y2L5 1435 aa23.02■■□□□ 1.28
SMARCD2-205ENST00000577686 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
SMARCD2-205ENST00000577686 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
SMARCD2-205ENST00000577686 CERKQ8TCT0 537 aa23.01■■□□□ 1.27
SMARCD2-205ENST00000577686 ZNF777Q9ULD5 760 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-205ENST00000577686 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
SMARCD2-205ENST00000577686 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
SMARCD2-205ENST00000577686 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
SMARCD2-205ENST00000577686 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
SMARCD2-205ENST00000577686 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 KIDINS220Q9ULH0 1771 aa22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 CFDP1Q9UEE9 299 aaPredicted RBP22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
SMARCD2-205ENST00000577686 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
SMARCD2-205ENST00000577686 C3P01024 1663 aa22.91■■□□□ 1.26
SMARCD2-205ENST00000577686 PTPRTO14522 1441 aa22.88■■□□□ 1.25
SMARCD2-205ENST00000577686 NPATQ14207 1427 aa22.87■■□□□ 1.25
SMARCD2-205ENST00000577686 ATP7AQ04656 1500 aa22.87■■□□□ 1.25
SMARCD2-205ENST00000577686 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
SMARCD2-205ENST00000577686 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
SMARCD2-205ENST00000577686 STRCQ7RTU9 1775 aa22.83■■□□□ 1.24
SMARCD2-205ENST00000577686 A2MP01023 1474 aa22.82■■□□□ 1.24
SMARCD2-205ENST00000577686 EHBP1L1Q8N3D4 1523 aa22.82■■□□□ 1.24
SMARCD2-205ENST00000577686 INO80Q9ULG1 1556 aaPredicted RBP22.81■■□□□ 1.24
SMARCD2-205ENST00000577686 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
SMARCD2-205ENST00000577686 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
SMARCD2-205ENST00000577686 PLXNC1O60486 1568 aa22.78■■□□□ 1.24
SMARCD2-205ENST00000577686 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
SMARCD2-205ENST00000577686 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-205ENST00000577686 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
SMARCD2-205ENST00000577686 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
SMARCD2-205ENST00000577686 GGT6Q6P531 493 aa22.74■■□□□ 1.23
SMARCD2-205ENST00000577686 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
SMARCD2-205ENST00000577686 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
SMARCD2-205ENST00000577686 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
SMARCD2-205ENST00000577686 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
SMARCD2-205ENST00000577686 CLTCQ00610 1675 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-205ENST00000577686 RSPH4AQ5TD94 716 aa22.69■■□□□ 1.22
SMARCD2-205ENST00000577686 PLA2R1Q13018 1463 aa22.68■■□□□ 1.22
SMARCD2-205ENST00000577686 PKD2Q13563 968 aa22.68■■□□□ 1.22
SMARCD2-205ENST00000577686 PTPRKQ15262 1439 aa22.67■■□□□ 1.22
SMARCD2-205ENST00000577686 ZNF142P52746 1687 aaPredicted RBP22.67■■□□□ 1.22
SMARCD2-205ENST00000577686 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
SMARCD2-205ENST00000577686 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
SMARCD2-205ENST00000577686 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
SMARCD2-205ENST00000577686 ZNF644Q9H582 1327 aaPredicted RBP22.65■■□□□ 1.22
SMARCD2-205ENST00000577686 CEP170BQ9Y4F5 1589 aaPredicted RBP22.65■■□□□ 1.22
SMARCD2-205ENST00000577686 FAM135AQ9P2D6 1515 aa22.65■■□□□ 1.22
SMARCD2-205ENST00000577686 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.22
SMARCD2-205ENST00000577686 LTBP4Q8N2S1 1624 aa22.64■■□□□ 1.21
SMARCD2-205ENST00000577686 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
SMARCD2-205ENST00000577686 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
SMARCD2-205ENST00000577686 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
SMARCD2-205ENST00000577686 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
SMARCD2-205ENST00000577686 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
SMARCD2-205ENST00000577686 KIF3BO15066 747 aa22.58■■□□□ 1.21
SMARCD2-205ENST00000577686 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
SMARCD2-205ENST00000577686 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms