RNA–Protein interactions for RNA: ENST00000577427.1

SCO1-203, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3 BASIC

Gene SCO1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-203ENST00000577427 PLEKHD1A6NEE1 506 aa28.42■■■□□ 2.14
SCO1-203ENST00000577427 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
SCO1-203ENST00000577427 KDM6BO15054 1643 aa28.4■■■□□ 2.14
SCO1-203ENST00000577427 RRP7BPQ9NSQ0 103 aa28.39■■■□□ 2.13
SCO1-203ENST00000577427 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.13
SCO1-203ENST00000577427 CFDP1Q9UEE9 299 aaPredicted RBP28.37■■■□□ 2.13
SCO1-203ENST00000577427 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
SCO1-203ENST00000577427 ERCC6L2Q5T890 1561 aa28.34■■■□□ 2.13
SCO1-203ENST00000577427 SIN3AQ96ST3 1273 aa28.34■■■□□ 2.13
SCO1-203ENST00000577427 ADGRL2O95490 1459 aa28.32■■■□□ 2.12
SCO1-203ENST00000577427 ZNF644Q9H582 1327 aaPredicted RBP28.32■■■□□ 2.12
SCO1-203ENST00000577427 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
SCO1-203ENST00000577427 PREX2Q70Z35 1606 aa28.31■■■□□ 2.12
SCO1-203ENST00000577427 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
SCO1-203ENST00000577427 ARHGEF5Q12774 1597 aa28.25■■■□□ 2.11
SCO1-203ENST00000577427 TONSLQ96HA7 1378 aa28.25■■■□□ 2.11
SCO1-203ENST00000577427 CDC42BPBQ9Y5S2 1711 aa28.25■■■□□ 2.11
SCO1-203ENST00000577427 UHRF1BP1LA0JNW5 1464 aa28.23■■■□□ 2.11
SCO1-203ENST00000577427 TRIM52Q96A61 297 aa28.21■■■□□ 2.11
SCO1-203ENST00000577427 DENND4BO75064 1496 aaPredicted RBP28.21■■■□□ 2.11
SCO1-203ENST00000577427 NCOA1Q15788 1441 aa28.2■■■□□ 2.1
SCO1-203ENST00000577427 MYO5CQ9NQX4 1742 aa28.2■■■□□ 2.1
SCO1-203ENST00000577427 ZCCHC11Q5TAX3 1644 aaKnown RBP28.2■■■□□ 2.1
SCO1-203ENST00000577427 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
SCO1-203ENST00000577427 ANKRD30AQ9BXX3 1397 aa28.18■■■□□ 2.1
SCO1-203ENST00000577427 PPP1R15AO75807 674 aaPredicted RBP28.17■■■□□ 2.1
SCO1-203ENST00000577427 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
SCO1-203ENST00000577427 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
SCO1-203ENST00000577427 MPHOSPH9Q99550 1183 aa28.14■■■□□ 2.09
SCO1-203ENST00000577427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.14■■■□□ 2.09
SCO1-203ENST00000577427 C9orf84Q5VXU9 1444 aa28.12■■■□□ 2.09
SCO1-203ENST00000577427 KDM5BQ9UGL1 1544 aa28.11■■■□□ 2.09
SCO1-203ENST00000577427 CCDC141Q6ZP82 1450 aa28.09■■■□□ 2.09
SCO1-203ENST00000577427 MIER1Q8N108 512 aa28.07■■■□□ 2.08
SCO1-203ENST00000577427 ARHGAP5Q13017 1502 aa28.06■■■□□ 2.08
SCO1-203ENST00000577427 MBD5Q9P267 1494 aa28.06■■■□□ 2.08
SCO1-203ENST00000577427 MAST1Q9Y2H9 1570 aa28.06■■■□□ 2.08
SCO1-203ENST00000577427 PZPP20742 1482 aa28.04■■■□□ 2.08
SCO1-203ENST00000577427 PLEKHH2Q8IVE3 1493 aa28.04■■■□□ 2.08
SCO1-203ENST00000577427 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
SCO1-203ENST00000577427 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
SCO1-203ENST00000577427 TSPY4P0CV99 314 aa28.01■■■□□ 2.07
SCO1-203ENST00000577427 TSPY10P0CW01 314 aa28.01■■■□□ 2.07
SCO1-203ENST00000577427 KDM5DQ9BY66 1539 aa28■■■□□ 2.07
SCO1-203ENST00000577427 ANKRD30BQ9BXX2 1392 aa28■■■□□ 2.07
SCO1-203ENST00000577427 CENPBP07199 599 aaPredicted RBP28■■■□□ 2.07
SCO1-203ENST00000577427 SYCP2Q9BX26 1530 aa28■■■□□ 2.07
SCO1-203ENST00000577427 RPRD2Q5VT52 1461 aaKnown RBP28■■■□□ 2.07
SCO1-203ENST00000577427 SLC4A1APQ9BWU0 796 aaKnown RBP27.97■■■□□ 2.07
SCO1-203ENST00000577427 KIAA1107Q9UPP5 1409 aa27.95■■■□□ 2.06
SCO1-203ENST00000577427 PLXNC1O60486 1568 aa27.95■■■□□ 2.06
SCO1-203ENST00000577427 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
SCO1-203ENST00000577427 KIF15Q9NS87 1388 aa27.93■■■□□ 2.06
SCO1-203ENST00000577427 ARAP3Q8WWN8 1544 aa27.93■■■□□ 2.06
SCO1-203ENST00000577427 PLCH2O75038 1416 aa27.91■■■□□ 2.06
SCO1-203ENST00000577427 TEX14Q8IWB6 1497 aa27.89■■■□□ 2.06
SCO1-203ENST00000577427 ABCC1P33527 1531 aa27.87■■■□□ 2.05
SCO1-203ENST00000577427 FOXD1Q16676 465 aa27.86■■■□□ 2.05
SCO1-203ENST00000577427 UNC13BO14795 1591 aa27.85■■■□□ 2.05
SCO1-203ENST00000577427 WDR7Q9Y4E6 1490 aa27.84■■■□□ 2.05
SCO1-203ENST00000577427 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
SCO1-203ENST00000577427 ABCA9Q8IUA7 1624 aa27.8■■■□□ 2.04
SCO1-203ENST00000577427 NUP155O75694 1391 aa27.8■■■□□ 2.04
SCO1-203ENST00000577427 EFCAB2Q5VUJ9 269 aa27.78■■■□□ 2.04
SCO1-203ENST00000577427 L3MBTL2Q969R5 705 aa27.78■■■□□ 2.04
SCO1-203ENST00000577427 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
SCO1-203ENST00000577427 ARHGEF12Q9NZN5 1544 aa27.77■■■□□ 2.04
SCO1-203ENST00000577427 PKD2Q13563 968 aa27.76■■■□□ 2.03
SCO1-203ENST00000577427 OSCARQ8IYS5 282 aa27.75■■■□□ 2.03
SCO1-203ENST00000577427 FAM135AQ9P2D6 1515 aa27.74■■■□□ 2.03
SCO1-203ENST00000577427 IQGAP3Q86VI3 1631 aa27.73■■■□□ 2.03
SCO1-203ENST00000577427 ERBINQ96RT1 1412 aa27.71■■■□□ 2.03
SCO1-203ENST00000577427 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.03
SCO1-203ENST00000577427 DDX10Q13206 875 aaKnown RBP27.69■■■□□ 2.02
SCO1-203ENST00000577427 POLR1AO95602 1720 aaPredicted RBP27.67■■■□□ 2.02
SCO1-203ENST00000577427 MAGI2Q86UL8 1455 aa27.67■■■□□ 2.02
SCO1-203ENST00000577427 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
SCO1-203ENST00000577427 EIF4G2P78344 907 aaKnown RBP eCLIP27.65■■■□□ 2.02
SCO1-203ENST00000577427 RTEL1-TNFRSF6BF6WH68 1400 aa27.65■■■□□ 2.02
SCO1-203ENST00000577427 ASXL2Q76L83 1435 aa27.65■■■□□ 2.02
SCO1-203ENST00000577427 ZFYVE16Q7Z3T8 1539 aa27.64■■■□□ 2.01
SCO1-203ENST00000577427 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
SCO1-203ENST00000577427 TRAPPC8Q9Y2L5 1435 aa27.62■■■□□ 2.01
SCO1-203ENST00000577427 FANCAO15360 1455 aa27.62■■■□□ 2.01
SCO1-203ENST00000577427 HSPA5P11021 654 aaKnown RBP27.61■■■□□ 2.01
SCO1-203ENST00000577427 INO80Q9ULG1 1556 aaPredicted RBP27.6■■■□□ 2.01
SCO1-203ENST00000577427 CFAP74Q9C0B2 1584 aa27.59■■■□□ 2.01
SCO1-203ENST00000577427 NBPF8Q3BBV2 869 aa27.57■■■□□ 2
SCO1-203ENST00000577427 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
SCO1-203ENST00000577427 ATP7AQ04656 1500 aa27.55■■■□□ 2
SCO1-203ENST00000577427 SPAG9O60271 1321 aaKnown RBP27.54■■■□□ 2
SCO1-203ENST00000577427 NPM1P06748 294 aaKnown RBP eCLIP27.54■■■□□ 2
SCO1-203ENST00000577427 DEPDC5O75140 1603 aa27.53■■■□□ 2
SCO1-203ENST00000577427 ADGRL1O94910 1474 aa27.52■■■□□ 2
SCO1-203ENST00000577427 RALGAPBQ86X10 1494 aa27.51■■□□□ 1.99
SCO1-203ENST00000577427 EIF2AK4Q9P2K8 1649 aaKnown RBP27.51■■□□□ 1.99
SCO1-203ENST00000577427 ANP32CO43423 234 aa27.5■■□□□ 1.99
SCO1-203ENST00000577427 SPATA31E1Q6ZUB1 1445 aa27.49■■□□□ 1.99
SCO1-203ENST00000577427 CCDC144AA2RUR9 1427 aa27.48■■□□□ 1.99
SCO1-203ENST00000577427 ATP10AO60312 1499 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms