RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 TOM1O60784 492 aa10.93□□□□□ -0.66
SNX11-204ENST00000577310 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
SNX11-204ENST00000577310 PIP4K2BP78356 416 aa10.91□□□□□ -0.66
SNX11-204ENST00000577310 RGS17Q9UGC6 210 aaPredicted RBP10.91□□□□□ -0.66
SNX11-204ENST00000577310 C3P01024 1663 aa10.9□□□□□ -0.66
SNX11-204ENST00000577310 CFAP74Q9C0B2 1584 aa10.89□□□□□ -0.67
SNX11-204ENST00000577310 CAMSAP1Q5T5Y3 1602 aa10.87□□□□□ -0.67
SNX11-204ENST00000577310 ATP10BO94823 1461 aa10.87□□□□□ -0.67
SNX11-204ENST00000577310 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
SNX11-204ENST00000577310 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
SNX11-204ENST00000577310 ATP10AO60312 1499 aa10.87□□□□□ -0.67
SNX11-204ENST00000577310 GOLGA3Q08378 1498 aa10.86□□□□□ -0.67
SNX11-204ENST00000577310 C9orf84Q5VXU9 1444 aa10.84□□□□□ -0.67
SNX11-204ENST00000577310 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
SNX11-204ENST00000577310 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
SNX11-204ENST00000577310 PKD2Q13563 968 aa10.82□□□□□ -0.68
SNX11-204ENST00000577310 PTPRKQ15262 1439 aa10.82□□□□□ -0.68
SNX11-204ENST00000577310 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
SNX11-204ENST00000577310 CPS1P31327 1500 aa10.81□□□□□ -0.68
SNX11-204ENST00000577310 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
SNX11-204ENST00000577310 CTTNBP2Q8WZ74 1663 aa10.8□□□□□ -0.68
SNX11-204ENST00000577310 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
SNX11-204ENST00000577310 PLA2R1Q13018 1463 aa10.8□□□□□ -0.68
SNX11-204ENST00000577310 ALKQ9UM73 1620 aa10.78□□□□□ -0.68
SNX11-204ENST00000577310 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
SNX11-204ENST00000577310 TCOF1Q13428 1488 aaKnown RBP10.78□□□□□ -0.68
SNX11-204ENST00000577310 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
SNX11-204ENST00000577310 PPP6R1Q9UPN7 881 aa10.77□□□□□ -0.69
SNX11-204ENST00000577310 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNX11-204ENST00000577310 NPATQ14207 1427 aa10.75□□□□□ -0.69
SNX11-204ENST00000577310 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
SNX11-204ENST00000577310 ZNF142P52746 1687 aaPredicted RBP10.75□□□□□ -0.69
SNX11-204ENST00000577310 SCAPERQ9BY12 1400 aa10.74□□□□□ -0.69
SNX11-204ENST00000577310 AGLP35573 1532 aa10.74□□□□□ -0.69
SNX11-204ENST00000577310 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
SNX11-204ENST00000577310 CNTLNQ9NXG0 1405 aa10.73□□□□□ -0.69
SNX11-204ENST00000577310 SHANK2Q9UPX8 1470 aa10.73□□□□□ -0.69
SNX11-204ENST00000577310 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
SNX11-204ENST00000577310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.71□□□□□ -0.69
SNX11-204ENST00000577310 HNRNPUL2Q1KMD3 747 aaKnown RBP10.71□□□□□ -0.69
SNX11-204ENST00000577310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNX11-204ENST00000577310 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
SNX11-204ENST00000577310 RAPGEF6Q8TEU7 1601 aa10.69□□□□□ -0.7
SNX11-204ENST00000577310 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
SNX11-204ENST00000577310 CEP170BQ9Y4F5 1589 aaPredicted RBP10.69□□□□□ -0.7
SNX11-204ENST00000577310 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
SNX11-204ENST00000577310 SENP3Q9H4L4 574 aaPredicted RBP10.68□□□□□ -0.7
SNX11-204ENST00000577310 DIP2CQ9Y2E4 1556 aa10.67□□□□□ -0.7
SNX11-204ENST00000577310 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
SNX11-204ENST00000577310 KDM5CP41229 1560 aa10.65□□□□□ -0.7
SNX11-204ENST00000577310 RNF17Q9BXT8 1623 aaKnown RBP10.65□□□□□ -0.7
SNX11-204ENST00000577310 PLCH2O75038 1416 aa10.64□□□□□ -0.71
SNX11-204ENST00000577310 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
SNX11-204ENST00000577310 ZMYM3Q14202 1370 aa10.64□□□□□ -0.71
SNX11-204ENST00000577310 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
SNX11-204ENST00000577310 NUP153P49790 1475 aaKnown RBP10.62□□□□□ -0.71
SNX11-204ENST00000577310 NEURL4Q96JN8 1562 aa10.62□□□□□ -0.71
SNX11-204ENST00000577310 DNMT1P26358 1616 aaKnown RBP10.61□□□□□ -0.71
SNX11-204ENST00000577310 MYO5CQ9NQX4 1742 aa10.61□□□□□ -0.71
SNX11-204ENST00000577310 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
SNX11-204ENST00000577310 MLH3Q9UHC1 1453 aa10.6□□□□□ -0.71
SNX11-204ENST00000577310 P3H3Q8IVL6 736 aa10.59□□□□□ -0.71
SNX11-204ENST00000577310 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
SNX11-204ENST00000577310 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
SNX11-204ENST00000577310 SYNMO15061 1565 aa10.59□□□□□ -0.71
SNX11-204ENST00000577310 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
SNX11-204ENST00000577310 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
SNX11-204ENST00000577310 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
SNX11-204ENST00000577310 A2ML1A8K2U0 1454 aa10.57□□□□□ -0.72
SNX11-204ENST00000577310 FOXD1Q16676 465 aa10.56□□□□□ -0.72
SNX11-204ENST00000577310 FAM135BQ49AJ0 1406 aa10.56□□□□□ -0.72
SNX11-204ENST00000577310 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
SNX11-204ENST00000577310 TRIM52Q96A61 297 aa10.54□□□□□ -0.72
SNX11-204ENST00000577310 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
SNX11-204ENST00000577310 MED14O60244 1454 aa10.54□□□□□ -0.72
SNX11-204ENST00000577310 KIDINS220Q9ULH0 1771 aa10.53□□□□□ -0.72
SNX11-204ENST00000577310 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
SNX11-204ENST00000577310 ZNF772Q68DY9 489 aaPredicted RBP10.53□□□□□ -0.72
SNX11-204ENST00000577310 ANKLE2Q86XL3 938 aa10.53□□□□□ -0.72
SNX11-204ENST00000577310 CDK12Q9NYV4 1490 aaPredicted RBP10.53□□□□□ -0.72
SNX11-204ENST00000577310 XIRP1Q702N8 1843 aaKnown RBP10.53□□□□□ -0.72
SNX11-204ENST00000577310 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SNX11-204ENST00000577310 IQGAP1P46940 1657 aa10.51□□□□□ -0.73
SNX11-204ENST00000577310 NPHP4O75161 1426 aaPredicted RBP10.5□□□□□ -0.73
SNX11-204ENST00000577310 CDK13Q14004 1512 aaKnown RBP10.5□□□□□ -0.73
SNX11-204ENST00000577310 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
SNX11-204ENST00000577310 RXRBP28702 533 aa10.49□□□□□ -0.73
SNX11-204ENST00000577310 EP400Q96L91 3159 aa10.49□□□□□ -0.73
SNX11-204ENST00000577310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNX11-204ENST00000577310 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
SNX11-204ENST00000577310 ROBO1Q9Y6N7 1651 aa10.48□□□□□ -0.73
SNX11-204ENST00000577310 ARHGAP5Q13017 1502 aa10.48□□□□□ -0.73
SNX11-204ENST00000577310 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
SNX11-204ENST00000577310 THEMISQ8N1K5 641 aaPredicted RBP10.47□□□□□ -0.73
SNX11-204ENST00000577310 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
SNX11-204ENST00000577310 JCADQ9P266 1359 aa10.47□□□□□ -0.73
SNX11-204ENST00000577310 ABCC1P33527 1531 aa10.46□□□□□ -0.74
SNX11-204ENST00000577310 CDC42BPBQ9Y5S2 1711 aa10.45□□□□□ -0.74
SNX11-204ENST00000577310 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
SNX11-204ENST00000577310 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms