RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 PTPN23Q9H3S7 1636 aa24.96■■□□□ 1.59
ERCC4-208ENST00000576348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.95■■□□□ 1.59
ERCC4-208ENST00000576348 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.58
ERCC4-208ENST00000576348 PREX2Q70Z35 1606 aa24.94■■□□□ 1.58
ERCC4-208ENST00000576348 TCOF1Q13428 1488 aaKnown RBP24.94■■□□□ 1.58
ERCC4-208ENST00000576348 GLI2P10070 1586 aa24.93■■□□□ 1.58
ERCC4-208ENST00000576348 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
ERCC4-208ENST00000576348 CDC42BPAQ5VT25 1732 aa24.93■■□□□ 1.58
ERCC4-208ENST00000576348 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
ERCC4-208ENST00000576348 CAMSAP2Q08AD1 1489 aa24.92■■□□□ 1.58
ERCC4-208ENST00000576348 ARAP3Q8WWN8 1544 aa24.91■■□□□ 1.58
ERCC4-208ENST00000576348 FANCAO15360 1455 aa24.89■■□□□ 1.57
ERCC4-208ENST00000576348 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.57
ERCC4-208ENST00000576348 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
ERCC4-208ENST00000576348 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
ERCC4-208ENST00000576348 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
ERCC4-208ENST00000576348 SAMD9LQ8IVG5 1584 aa24.82■■□□□ 1.56
ERCC4-208ENST00000576348 MAP3K4Q9Y6R4 1608 aa24.82■■□□□ 1.56
ERCC4-208ENST00000576348 KIAA1107Q9UPP5 1409 aa24.81■■□□□ 1.56
ERCC4-208ENST00000576348 RSPH4AQ5TD94 716 aa24.81■■□□□ 1.56
ERCC4-208ENST00000576348 CFAP74Q9C0B2 1584 aa24.8■■□□□ 1.56
ERCC4-208ENST00000576348 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
ERCC4-208ENST00000576348 TEX14Q8IWB6 1497 aa24.79■■□□□ 1.56
ERCC4-208ENST00000576348 DAPK1P53355 1430 aa24.78■■□□□ 1.56
ERCC4-208ENST00000576348 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
ERCC4-208ENST00000576348 NEO1Q92859 1461 aa24.78■■□□□ 1.56
ERCC4-208ENST00000576348 TSPY4P0CV99 314 aa24.78■■□□□ 1.56
ERCC4-208ENST00000576348 TSPY10P0CW01 314 aa24.78■■□□□ 1.56
ERCC4-208ENST00000576348 SYCP2Q9BX26 1530 aa24.77■■□□□ 1.56
ERCC4-208ENST00000576348 CHIC2Q9UKJ5 165 aa24.76■■□□□ 1.55
ERCC4-208ENST00000576348 ABCC5O15440 1437 aa24.76■■□□□ 1.55
ERCC4-208ENST00000576348 SCAPERQ9BY12 1400 aa24.76■■□□□ 1.55
ERCC4-208ENST00000576348 ABCC1P33527 1531 aa24.76■■□□□ 1.55
ERCC4-208ENST00000576348 CCDC141Q6ZP82 1450 aa24.75■■□□□ 1.55
ERCC4-208ENST00000576348 DNMT1P26358 1616 aaKnown RBP24.73■■□□□ 1.55
ERCC4-208ENST00000576348 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
ERCC4-208ENST00000576348 ARHGEF5Q12774 1597 aa24.72■■□□□ 1.55
ERCC4-208ENST00000576348 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.55
ERCC4-208ENST00000576348 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
ERCC4-208ENST00000576348 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
ERCC4-208ENST00000576348 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
ERCC4-208ENST00000576348 C9orf84Q5VXU9 1444 aa24.69■■□□□ 1.54
ERCC4-208ENST00000576348 TRAPPC8Q9Y2L5 1435 aa24.68■■□□□ 1.54
ERCC4-208ENST00000576348 SHANK2Q9UPX8 1470 aa24.67■■□□□ 1.54
ERCC4-208ENST00000576348 TSPOAP1O95153 1857 aa24.66■■□□□ 1.54
ERCC4-208ENST00000576348 SPAG9O60271 1321 aaKnown RBP24.66■■□□□ 1.54
ERCC4-208ENST00000576348 DENND4BO75064 1496 aaPredicted RBP24.66■■□□□ 1.54
ERCC4-208ENST00000576348 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
ERCC4-208ENST00000576348 ANKRD30AQ9BXX3 1397 aa24.66■■□□□ 1.54
ERCC4-208ENST00000576348 RRP7BPQ9NSQ0 103 aa24.65■■□□□ 1.54
ERCC4-208ENST00000576348 ROCK1Q13464 1354 aa24.64■■□□□ 1.53
ERCC4-208ENST00000576348 POGZQ7Z3K3 1410 aa24.63■■□□□ 1.53
ERCC4-208ENST00000576348 ZNF518AQ6AHZ1 1483 aa24.63■■□□□ 1.53
ERCC4-208ENST00000576348 PPRC1Q5VV67 1664 aaKnown RBP24.6■■□□□ 1.53
ERCC4-208ENST00000576348 CROCC2H7BZ55 1655 aa24.59■■□□□ 1.53
ERCC4-208ENST00000576348 RAPGEF3O95398 923 aa24.59■■□□□ 1.53
ERCC4-208ENST00000576348 SETD5Q9C0A6 1442 aa24.59■■□□□ 1.53
ERCC4-208ENST00000576348 HFM1A2PYH4 1435 aa24.58■■□□□ 1.53
ERCC4-208ENST00000576348 ADGRL2O95490 1459 aa24.58■■□□□ 1.52
ERCC4-208ENST00000576348 NCOA1Q15788 1441 aa24.56■■□□□ 1.52
ERCC4-208ENST00000576348 KIF15Q9NS87 1388 aa24.55■■□□□ 1.52
ERCC4-208ENST00000576348 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
ERCC4-208ENST00000576348 RTEL1-TNFRSF6BF6WH68 1400 aa24.54■■□□□ 1.52
ERCC4-208ENST00000576348 NAIPQ13075 1403 aa24.53■■□□□ 1.52
ERCC4-208ENST00000576348 ADGBQ8N7X0 1667 aa24.53■■□□□ 1.52
ERCC4-208ENST00000576348 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
ERCC4-208ENST00000576348 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
ERCC4-208ENST00000576348 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
ERCC4-208ENST00000576348 KDM5CP41229 1560 aa24.49■■□□□ 1.51
ERCC4-208ENST00000576348 MLH3Q9UHC1 1453 aa24.48■■□□□ 1.51
ERCC4-208ENST00000576348 ANKRD50Q9ULJ7 1429 aa24.46■■□□□ 1.51
ERCC4-208ENST00000576348 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
ERCC4-208ENST00000576348 HECW2Q9P2P5 1572 aa24.46■■□□□ 1.51
ERCC4-208ENST00000576348 INO80Q9ULG1 1556 aaPredicted RBP24.46■■□□□ 1.51
ERCC4-208ENST00000576348 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
ERCC4-208ENST00000576348 HRCP23327 699 aa24.44■■□□□ 1.5
ERCC4-208ENST00000576348 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
ERCC4-208ENST00000576348 RICTORQ6R327 1708 aa24.43■■□□□ 1.5
ERCC4-208ENST00000576348 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
ERCC4-208ENST00000576348 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
ERCC4-208ENST00000576348 COL17A1Q9UMD9 1497 aaPredicted RBP24.42■■□□□ 1.5
ERCC4-208ENST00000576348 FRMPD1Q5SYB0 1578 aa24.42■■□□□ 1.5
ERCC4-208ENST00000576348 ZMYM4Q5VZL5 1548 aa24.41■■□□□ 1.5
ERCC4-208ENST00000576348 MAGI2Q86UL8 1455 aa24.41■■□□□ 1.5
ERCC4-208ENST00000576348 ERBINQ96RT1 1412 aa24.38■■□□□ 1.49
ERCC4-208ENST00000576348 KDM6BO15054 1643 aa24.38■■□□□ 1.49
ERCC4-208ENST00000576348 DHX29Q7Z478 1369 aaKnown RBP24.37■■□□□ 1.49
ERCC4-208ENST00000576348 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
ERCC4-208ENST00000576348 A2MP01023 1474 aa24.36■■□□□ 1.49
ERCC4-208ENST00000576348 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
ERCC4-208ENST00000576348 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
ERCC4-208ENST00000576348 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
ERCC4-208ENST00000576348 KIF3BO15066 747 aa24.31■■□□□ 1.48
ERCC4-208ENST00000576348 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
ERCC4-208ENST00000576348 ATP10AO60312 1499 aa24.31■■□□□ 1.48
ERCC4-208ENST00000576348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.3■■□□□ 1.48
ERCC4-208ENST00000576348 NUP155O75694 1391 aa24.28■■□□□ 1.48
ERCC4-208ENST00000576348 ARHGEF40Q8TER5 1519 aa24.26■■□□□ 1.47
ERCC4-208ENST00000576348 KANK1Q14678 1352 aa24.25■■□□□ 1.47
ERCC4-208ENST00000576348 SLC4A1APQ9BWU0 796 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms