RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-210ENST00000576148 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
RAB40B-210ENST00000576148 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
RAB40B-210ENST00000576148 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
RAB40B-210ENST00000576148 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
RAB40B-210ENST00000576148 TOM1O60784 492 aa12.87□□□□□ -0.35
RAB40B-210ENST00000576148 RICTORQ6R327 1708 aa12.87□□□□□ -0.35
RAB40B-210ENST00000576148 ZMYM4Q5VZL5 1548 aa12.87□□□□□ -0.35
RAB40B-210ENST00000576148 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
RAB40B-210ENST00000576148 SUPT5HO00267 1087 aaKnown RBP12.85□□□□□ -0.35
RAB40B-210ENST00000576148 ATP10AO60312 1499 aa12.84□□□□□ -0.35
RAB40B-210ENST00000576148 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
RAB40B-210ENST00000576148 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
RAB40B-210ENST00000576148 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
RAB40B-210ENST00000576148 ESF1Q9H501 851 aaKnown RBP12.82□□□□□ -0.36
RAB40B-210ENST00000576148 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
RAB40B-210ENST00000576148 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
RAB40B-210ENST00000576148 PKD2Q13563 968 aa12.78□□□□□ -0.36
RAB40B-210ENST00000576148 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
RAB40B-210ENST00000576148 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
RAB40B-210ENST00000576148 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
RAB40B-210ENST00000576148 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.37
RAB40B-210ENST00000576148 SCAPERQ9BY12 1400 aa12.76□□□□□ -0.37
RAB40B-210ENST00000576148 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
RAB40B-210ENST00000576148 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-210ENST00000576148 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
RAB40B-210ENST00000576148 PTPRKQ15262 1439 aa12.71□□□□□ -0.38
RAB40B-210ENST00000576148 C3P01024 1663 aa12.7□□□□□ -0.38
RAB40B-210ENST00000576148 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
RAB40B-210ENST00000576148 CTTNBP2Q8WZ74 1663 aa12.68□□□□□ -0.38
RAB40B-210ENST00000576148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB40B-210ENST00000576148 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
RAB40B-210ENST00000576148 NPATQ14207 1427 aa12.67□□□□□ -0.38
RAB40B-210ENST00000576148 CNTLNQ9NXG0 1405 aa12.67□□□□□ -0.38
RAB40B-210ENST00000576148 CPS1P31327 1500 aa12.67□□□□□ -0.38
RAB40B-210ENST00000576148 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
RAB40B-210ENST00000576148 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
RAB40B-210ENST00000576148 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
RAB40B-210ENST00000576148 PLCH2O75038 1416 aa12.64□□□□□ -0.39
RAB40B-210ENST00000576148 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
RAB40B-210ENST00000576148 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
RAB40B-210ENST00000576148 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
RAB40B-210ENST00000576148 AGLP35573 1532 aa12.62□□□□□ -0.39
RAB40B-210ENST00000576148 ZMYM3Q14202 1370 aa12.62□□□□□ -0.39
RAB40B-210ENST00000576148 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
RAB40B-210ENST00000576148 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB40B-210ENST00000576148 REREQ9P2R6 1566 aa12.59□□□□□ -0.39
RAB40B-210ENST00000576148 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
RAB40B-210ENST00000576148 ALKQ9UM73 1620 aa12.56□□□□□ -0.4
RAB40B-210ENST00000576148 CEP170BQ9Y4F5 1589 aaPredicted RBP12.55□□□□□ -0.4
RAB40B-210ENST00000576148 KDM5CP41229 1560 aa12.54□□□□□ -0.4
RAB40B-210ENST00000576148 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
RAB40B-210ENST00000576148 SRCAPQ6ZRS2 3230 aa12.53□□□□□ -0.4
RAB40B-210ENST00000576148 ZNF142P52746 1687 aaPredicted RBP12.52□□□□□ -0.4
RAB40B-210ENST00000576148 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
RAB40B-210ENST00000576148 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
RAB40B-210ENST00000576148 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
RAB40B-210ENST00000576148 MROH2AA6NES4 1674 aa12.51□□□□□ -0.41
RAB40B-210ENST00000576148 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
RAB40B-210ENST00000576148 ABCA6Q8N139 1617 aa12.49□□□□□ -0.41
RAB40B-210ENST00000576148 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
RAB40B-210ENST00000576148 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
RAB40B-210ENST00000576148 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
RAB40B-210ENST00000576148 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
RAB40B-210ENST00000576148 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-210ENST00000576148 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
RAB40B-210ENST00000576148 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.42
RAB40B-210ENST00000576148 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
RAB40B-210ENST00000576148 NEURL4Q96JN8 1562 aa12.44□□□□□ -0.42
RAB40B-210ENST00000576148 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-210ENST00000576148 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
RAB40B-210ENST00000576148 MYO5CQ9NQX4 1742 aa12.43□□□□□ -0.42
RAB40B-210ENST00000576148 GGT6Q6P531 493 aa12.43□□□□□ -0.42
RAB40B-210ENST00000576148 THEMISQ8N1K5 641 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-210ENST00000576148 RNF17Q9BXT8 1623 aaKnown RBP12.43□□□□□ -0.42
RAB40B-210ENST00000576148 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-210ENST00000576148 FAM135BQ49AJ0 1406 aa12.42□□□□□ -0.42
RAB40B-210ENST00000576148 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
RAB40B-210ENST00000576148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB40B-210ENST00000576148 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.42
RAB40B-210ENST00000576148 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
RAB40B-210ENST00000576148 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
RAB40B-210ENST00000576148 CLTCQ00610 1675 aaKnown RBP12.4□□□□□ -0.42
RAB40B-210ENST00000576148 MED14O60244 1454 aa12.39□□□□□ -0.43
RAB40B-210ENST00000576148 FOXD1Q16676 465 aa12.38□□□□□ -0.43
RAB40B-210ENST00000576148 RXRBP28702 533 aa12.37□□□□□ -0.43
RAB40B-210ENST00000576148 TNRQ92752 1358 aa12.37□□□□□ -0.43
RAB40B-210ENST00000576148 KIDINS220Q9ULH0 1771 aa12.36□□□□□ -0.43
RAB40B-210ENST00000576148 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
RAB40B-210ENST00000576148 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
RAB40B-210ENST00000576148 SYNMO15061 1565 aa12.35□□□□□ -0.43
RAB40B-210ENST00000576148 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
RAB40B-210ENST00000576148 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-210ENST00000576148 ABCC1P33527 1531 aa12.34□□□□□ -0.43
RAB40B-210ENST00000576148 KIF14Q15058 1648 aa12.33□□□□□ -0.43
RAB40B-210ENST00000576148 JCADQ9P266 1359 aa12.33□□□□□ -0.44
RAB40B-210ENST00000576148 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
RAB40B-210ENST00000576148 CLIP1P30622 1438 aa12.32□□□□□ -0.44
RAB40B-210ENST00000576148 TROQ12816 1431 aaPredicted RBP12.32□□□□□ -0.44
RAB40B-210ENST00000576148 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms