RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 GPATCH8Q9UKJ3 1502 aaKnown RBP17.04■□□□□ 0.32
SLC12A4-215ENST00000575857 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
SLC12A4-215ENST00000575857 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
SLC12A4-215ENST00000575857 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
SLC12A4-215ENST00000575857 PREX2Q70Z35 1606 aa17.01■□□□□ 0.31
SLC12A4-215ENST00000575857 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
SLC12A4-215ENST00000575857 APLP2Q06481 763 aa17■□□□□ 0.31
SLC12A4-215ENST00000575857 CDC42BPAQ5VT25 1732 aa17■□□□□ 0.31
SLC12A4-215ENST00000575857 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
SLC12A4-215ENST00000575857 PTPRMP28827 1452 aa16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 CFAP74Q9C0B2 1584 aa16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 ARHGAP5Q13017 1502 aa16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
SLC12A4-215ENST00000575857 ADAMTSL3P82987 1691 aa16.97■□□□□ 0.31
SLC12A4-215ENST00000575857 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
SLC12A4-215ENST00000575857 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
SLC12A4-215ENST00000575857 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
SLC12A4-215ENST00000575857 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
SLC12A4-215ENST00000575857 ABCC1P33527 1531 aa16.92■□□□□ 0.3
SLC12A4-215ENST00000575857 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
SLC12A4-215ENST00000575857 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
SLC12A4-215ENST00000575857 MADDQ8WXG6 1647 aa16.92■□□□□ 0.3
SLC12A4-215ENST00000575857 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
SLC12A4-215ENST00000575857 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
SLC12A4-215ENST00000575857 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
SLC12A4-215ENST00000575857 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
SLC12A4-215ENST00000575857 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
SLC12A4-215ENST00000575857 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
SLC12A4-215ENST00000575857 KIAA1107Q9UPP5 1409 aa16.89■□□□□ 0.29
SLC12A4-215ENST00000575857 ARHGEF40Q8TER5 1519 aa16.89■□□□□ 0.29
SLC12A4-215ENST00000575857 ZNF644Q9H582 1327 aaPredicted RBP16.89■□□□□ 0.29
SLC12A4-215ENST00000575857 YEATS2Q9ULM3 1422 aa16.88■□□□□ 0.29
SLC12A4-215ENST00000575857 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
SLC12A4-215ENST00000575857 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
SLC12A4-215ENST00000575857 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
SLC12A4-215ENST00000575857 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
SLC12A4-215ENST00000575857 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
SLC12A4-215ENST00000575857 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
SLC12A4-215ENST00000575857 MBD5Q9P267 1494 aa16.86■□□□□ 0.29
SLC12A4-215ENST00000575857 SYCP2Q9BX26 1530 aa16.86■□□□□ 0.29
SLC12A4-215ENST00000575857 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
SLC12A4-215ENST00000575857 HSPA2P54652 639 aa16.85■□□□□ 0.29
SLC12A4-215ENST00000575857 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
SLC12A4-215ENST00000575857 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
SLC12A4-215ENST00000575857 KDM5CP41229 1560 aa16.85■□□□□ 0.29
SLC12A4-215ENST00000575857 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC12A4-215ENST00000575857 FBXO41Q8TF61 875 aa16.84■□□□□ 0.29
SLC12A4-215ENST00000575857 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
SLC12A4-215ENST00000575857 MLECQ14165 292 aa16.83■□□□□ 0.28
SLC12A4-215ENST00000575857 RIMS1Q86UR5 1692 aaKnown RBP16.83■□□□□ 0.28
SLC12A4-215ENST00000575857 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
SLC12A4-215ENST00000575857 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
SLC12A4-215ENST00000575857 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
SLC12A4-215ENST00000575857 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
SLC12A4-215ENST00000575857 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
SLC12A4-215ENST00000575857 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
SLC12A4-215ENST00000575857 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
SLC12A4-215ENST00000575857 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
SLC12A4-215ENST00000575857 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
SLC12A4-215ENST00000575857 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
SLC12A4-215ENST00000575857 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
SLC12A4-215ENST00000575857 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
SLC12A4-215ENST00000575857 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
SLC12A4-215ENST00000575857 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
SLC12A4-215ENST00000575857 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
SLC12A4-215ENST00000575857 ATP10AO60312 1499 aa16.72■□□□□ 0.27
SLC12A4-215ENST00000575857 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
SLC12A4-215ENST00000575857 ABCC5O15440 1437 aa16.71■□□□□ 0.27
SLC12A4-215ENST00000575857 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
SLC12A4-215ENST00000575857 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
SLC12A4-215ENST00000575857 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
SLC12A4-215ENST00000575857 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
SLC12A4-215ENST00000575857 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
SLC12A4-215ENST00000575857 DAPK1P53355 1430 aa16.68■□□□□ 0.26
SLC12A4-215ENST00000575857 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
SLC12A4-215ENST00000575857 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
SLC12A4-215ENST00000575857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
SLC12A4-215ENST00000575857 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
SLC12A4-215ENST00000575857 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
SLC12A4-215ENST00000575857 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
SLC12A4-215ENST00000575857 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
SLC12A4-215ENST00000575857 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
SLC12A4-215ENST00000575857 FAM50AQ14320 339 aaKnown RBP16.65■□□□□ 0.26
SLC12A4-215ENST00000575857 AGLP35573 1532 aa16.64■□□□□ 0.25
SLC12A4-215ENST00000575857 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
SLC12A4-215ENST00000575857 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
SLC12A4-215ENST00000575857 A2MP01023 1474 aa16.63■□□□□ 0.25
SLC12A4-215ENST00000575857 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
SLC12A4-215ENST00000575857 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
SLC12A4-215ENST00000575857 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
SLC12A4-215ENST00000575857 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
SLC12A4-215ENST00000575857 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
SLC12A4-215ENST00000575857 NCOA1Q15788 1441 aa16.57■□□□□ 0.24
SLC12A4-215ENST00000575857 KIF15Q9NS87 1388 aa16.56■□□□□ 0.24
SLC12A4-215ENST00000575857 CHIC2Q9UKJ5 165 aa16.56■□□□□ 0.24
SLC12A4-215ENST00000575857 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
SLC12A4-215ENST00000575857 PREX1Q8TCU6 1659 aa16.54■□□□□ 0.24
SLC12A4-215ENST00000575857 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms