RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
ERCC4-206ENST00000574781 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
ERCC4-206ENST00000574781 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
ERCC4-206ENST00000574781 TEX14Q8IWB6 1497 aa13.45□□□□□ -0.26
ERCC4-206ENST00000574781 PRXQ9BXM0 1461 aa13.45□□□□□ -0.26
ERCC4-206ENST00000574781 MAP3K4Q9Y6R4 1608 aa13.45□□□□□ -0.26
ERCC4-206ENST00000574781 CTTNBP2Q8WZ74 1663 aa13.41□□□□□ -0.26
ERCC4-206ENST00000574781 ABCA8O94911 1581 aa13.41□□□□□ -0.26
ERCC4-206ENST00000574781 ATP10BO94823 1461 aa13.38□□□□□ -0.27
ERCC4-206ENST00000574781 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
ERCC4-206ENST00000574781 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
ERCC4-206ENST00000574781 RAPGEF3O95398 923 aa13.36□□□□□ -0.27
ERCC4-206ENST00000574781 GABBR2O75899 941 aa13.34□□□□□ -0.27
ERCC4-206ENST00000574781 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
ERCC4-206ENST00000574781 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
ERCC4-206ENST00000574781 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
ERCC4-206ENST00000574781 ATP1B4Q9UN42 357 aaPredicted RBP13.28□□□□□ -0.28
ERCC4-206ENST00000574781 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
ERCC4-206ENST00000574781 ARAP3Q8WWN8 1544 aa13.27□□□□□ -0.29
ERCC4-206ENST00000574781 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
ERCC4-206ENST00000574781 UBTFP17480 764 aaKnown RBP13.25□□□□□ -0.29
ERCC4-206ENST00000574781 KIF21BO75037 1637 aa13.24□□□□□ -0.29
ERCC4-206ENST00000574781 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
ERCC4-206ENST00000574781 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
ERCC4-206ENST00000574781 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
ERCC4-206ENST00000574781 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
ERCC4-206ENST00000574781 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
ERCC4-206ENST00000574781 EEA1Q15075 1411 aa13.22□□□□□ -0.29
ERCC4-206ENST00000574781 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
ERCC4-206ENST00000574781 NEO1Q92859 1461 aa13.2□□□□□ -0.3
ERCC4-206ENST00000574781 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
ERCC4-206ENST00000574781 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
ERCC4-206ENST00000574781 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
ERCC4-206ENST00000574781 MLECQ14165 292 aa13.17□□□□□ -0.3
ERCC4-206ENST00000574781 PTPRMP28827 1452 aa13.16□□□□□ -0.3
ERCC4-206ENST00000574781 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
ERCC4-206ENST00000574781 FANCAO15360 1455 aa13.15□□□□□ -0.3
ERCC4-206ENST00000574781 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
ERCC4-206ENST00000574781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC4-206ENST00000574781 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
ERCC4-206ENST00000574781 HSPA2P54652 639 aa13.12□□□□□ -0.31
ERCC4-206ENST00000574781 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
ERCC4-206ENST00000574781 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
ERCC4-206ENST00000574781 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
ERCC4-206ENST00000574781 SCAPERQ9BY12 1400 aa13.1□□□□□ -0.31
ERCC4-206ENST00000574781 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
ERCC4-206ENST00000574781 EFCAB5A4FU69 1503 aa13.09□□□□□ -0.31
ERCC4-206ENST00000574781 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
ERCC4-206ENST00000574781 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
ERCC4-206ENST00000574781 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
ERCC4-206ENST00000574781 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
ERCC4-206ENST00000574781 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
ERCC4-206ENST00000574781 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
ERCC4-206ENST00000574781 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
ERCC4-206ENST00000574781 PLCH2O75038 1416 aa13.07□□□□□ -0.32
ERCC4-206ENST00000574781 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
ERCC4-206ENST00000574781 FBXO41Q8TF61 875 aa13.07□□□□□ -0.32
ERCC4-206ENST00000574781 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
ERCC4-206ENST00000574781 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
ERCC4-206ENST00000574781 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
ERCC4-206ENST00000574781 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
ERCC4-206ENST00000574781 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
ERCC4-206ENST00000574781 ARHGEF40Q8TER5 1519 aa13.03□□□□□ -0.32
ERCC4-206ENST00000574781 RIMS1Q86UR5 1692 aaKnown RBP13.03□□□□□ -0.32
ERCC4-206ENST00000574781 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
ERCC4-206ENST00000574781 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
ERCC4-206ENST00000574781 HECW1Q76N89 1606 aa13.02□□□□□ -0.32
ERCC4-206ENST00000574781 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
ERCC4-206ENST00000574781 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
ERCC4-206ENST00000574781 CFAP74Q9C0B2 1584 aa13.02□□□□□ -0.33
ERCC4-206ENST00000574781 POTEMA6NI47 508 aa13.01□□□□□ -0.33
ERCC4-206ENST00000574781 MAGI2Q86UL8 1455 aa13.01□□□□□ -0.33
ERCC4-206ENST00000574781 ATP10AO60312 1499 aa13□□□□□ -0.33
ERCC4-206ENST00000574781 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
ERCC4-206ENST00000574781 ZMYM4Q5VZL5 1548 aa12.99□□□□□ -0.33
ERCC4-206ENST00000574781 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
ERCC4-206ENST00000574781 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
ERCC4-206ENST00000574781 KIF14Q15058 1648 aa12.98□□□□□ -0.33
ERCC4-206ENST00000574781 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
ERCC4-206ENST00000574781 CLIP1P30622 1438 aa12.97□□□□□ -0.33
ERCC4-206ENST00000574781 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
ERCC4-206ENST00000574781 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
ERCC4-206ENST00000574781 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
ERCC4-206ENST00000574781 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
ERCC4-206ENST00000574781 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
ERCC4-206ENST00000574781 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
ERCC4-206ENST00000574781 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
ERCC4-206ENST00000574781 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERCC4-206ENST00000574781 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
ERCC4-206ENST00000574781 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
ERCC4-206ENST00000574781 TRAPPC8Q9Y2L5 1435 aa12.92□□□□□ -0.34
ERCC4-206ENST00000574781 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
ERCC4-206ENST00000574781 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
ERCC4-206ENST00000574781 FER1L4A9Z1Z3 1794 aa12.91□□□□□ -0.34
ERCC4-206ENST00000574781 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
ERCC4-206ENST00000574781 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
ERCC4-206ENST00000574781 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
ERCC4-206ENST00000574781 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
ERCC4-206ENST00000574781 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
ERCC4-206ENST00000574781 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms