RNA–Protein interactions for RNA: ENST00000572795.1

PITPNM3-203, Transcript of PITPNM family member 3, humanhuman

TSL 1 (best)

Gene PITPNM3, Length 5,369 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-203ENST00000572795 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
PITPNM3-203ENST00000572795 JPH4Q96JJ6 628 aa16.69■□□□□ 0.26
PITPNM3-203ENST00000572795 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
PITPNM3-203ENST00000572795 MS4A1P11836 297 aa16.68■□□□□ 0.26
PITPNM3-203ENST00000572795 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
PITPNM3-203ENST00000572795 PTMSP20962 102 aa16.66■□□□□ 0.26
PITPNM3-203ENST00000572795 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
PITPNM3-203ENST00000572795 PKD2Q13563 968 aa16.65■□□□□ 0.26
PITPNM3-203ENST00000572795 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
PITPNM3-203ENST00000572795 TMF1P82094 1093 aa16.65■□□□□ 0.26
PITPNM3-203ENST00000572795 FHOD3Q2V2M9 1422 aa16.64■□□□□ 0.25
PITPNM3-203ENST00000572795 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
PITPNM3-203ENST00000572795 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
PITPNM3-203ENST00000572795 NRDCO43847 1150 aa16.63■□□□□ 0.25
PITPNM3-203ENST00000572795 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
PITPNM3-203ENST00000572795 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
PITPNM3-203ENST00000572795 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
PITPNM3-203ENST00000572795 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
PITPNM3-203ENST00000572795 RSPH4AQ5TD94 716 aa16.59■□□□□ 0.25
PITPNM3-203ENST00000572795 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
PITPNM3-203ENST00000572795 NUP155O75694 1391 aa16.59■□□□□ 0.25
PITPNM3-203ENST00000572795 CFAP44Q96MT7 982 aa16.58■□□□□ 0.25
PITPNM3-203ENST00000572795 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
PITPNM3-203ENST00000572795 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
PITPNM3-203ENST00000572795 CC2D1BQ5T0F9 858 aaKnown RBP16.56■□□□□ 0.24
PITPNM3-203ENST00000572795 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 KIF3BO15066 747 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 GBP4Q96PP9 640 aa16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
PITPNM3-203ENST00000572795 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
PITPNM3-203ENST00000572795 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PITPNM3-203ENST00000572795 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
PITPNM3-203ENST00000572795 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
PITPNM3-203ENST00000572795 PTPRGP23470 1445 aa16.52■□□□□ 0.24
PITPNM3-203ENST00000572795 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
PITPNM3-203ENST00000572795 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
PITPNM3-203ENST00000572795 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
PITPNM3-203ENST00000572795 STK26Q9P289 416 aa16.51■□□□□ 0.23
PITPNM3-203ENST00000572795 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
PITPNM3-203ENST00000572795 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
PITPNM3-203ENST00000572795 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
PITPNM3-203ENST00000572795 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
PITPNM3-203ENST00000572795 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
PITPNM3-203ENST00000572795 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
PITPNM3-203ENST00000572795 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
PITPNM3-203ENST00000572795 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
PITPNM3-203ENST00000572795 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
PITPNM3-203ENST00000572795 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
PITPNM3-203ENST00000572795 MCCP23508 829 aa16.46■□□□□ 0.23
PITPNM3-203ENST00000572795 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
PITPNM3-203ENST00000572795 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
PITPNM3-203ENST00000572795 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
PITPNM3-203ENST00000572795 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
PITPNM3-203ENST00000572795 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
PITPNM3-203ENST00000572795 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
PITPNM3-203ENST00000572795 SOX12O15370 315 aa16.43■□□□□ 0.22
PITPNM3-203ENST00000572795 IGF1RP08069 1367 aa16.43■□□□□ 0.22
PITPNM3-203ENST00000572795 DRC7Q8IY82 874 aa16.42■□□□□ 0.22
PITPNM3-203ENST00000572795 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
PITPNM3-203ENST00000572795 SPRYD3Q8NCJ5 442 aa16.42■□□□□ 0.22
PITPNM3-203ENST00000572795 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
PITPNM3-203ENST00000572795 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
PITPNM3-203ENST00000572795 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
PITPNM3-203ENST00000572795 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
PITPNM3-203ENST00000572795 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
PITPNM3-203ENST00000572795 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
PITPNM3-203ENST00000572795 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
PITPNM3-203ENST00000572795 RALBP1Q15311 655 aa16.37■□□□□ 0.21
PITPNM3-203ENST00000572795 TNNT3P45378 269 aaPredicted RBP16.36■□□□□ 0.21
PITPNM3-203ENST00000572795 FGD1P98174 961 aa16.36■□□□□ 0.21
PITPNM3-203ENST00000572795 KCNJ4P48050 445 aa16.35■□□□□ 0.21
PITPNM3-203ENST00000572795 GSE1Q14687 1217 aa16.35■□□□□ 0.21
PITPNM3-203ENST00000572795 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
PITPNM3-203ENST00000572795 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
PITPNM3-203ENST00000572795 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
PITPNM3-203ENST00000572795 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
PITPNM3-203ENST00000572795 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
PITPNM3-203ENST00000572795 NPHP1O15259 732 aa16.32■□□□□ 0.2
PITPNM3-203ENST00000572795 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
PITPNM3-203ENST00000572795 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
PITPNM3-203ENST00000572795 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
PITPNM3-203ENST00000572795 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
PITPNM3-203ENST00000572795 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
PITPNM3-203ENST00000572795 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
PITPNM3-203ENST00000572795 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
PITPNM3-203ENST00000572795 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
PITPNM3-203ENST00000572795 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
PITPNM3-203ENST00000572795 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
PITPNM3-203ENST00000572795 ARID3AQ99856 593 aa16.28■□□□□ 0.2
PITPNM3-203ENST00000572795 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
PITPNM3-203ENST00000572795 CFTRP13569 1480 aa16.28■□□□□ 0.2
PITPNM3-203ENST00000572795 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
PITPNM3-203ENST00000572795 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
PITPNM3-203ENST00000572795 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
PITPNM3-203ENST00000572795 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms