RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 SOX12O15370 315 aa17.44■□□□□ 0.38
PRPF8-205ENST00000572621 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
PRPF8-205ENST00000572621 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
PRPF8-205ENST00000572621 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
PRPF8-205ENST00000572621 SYAP1Q96A49 352 aaPredicted RBP17.42■□□□□ 0.38
PRPF8-205ENST00000572621 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
PRPF8-205ENST00000572621 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
PRPF8-205ENST00000572621 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
PRPF8-205ENST00000572621 IPO9Q96P70 1041 aaKnown RBP17.39■□□□□ 0.37
PRPF8-205ENST00000572621 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
PRPF8-205ENST00000572621 HSP90AA2PQ14568 343 aaPredicted RBP17.38■□□□□ 0.37
PRPF8-205ENST00000572621 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
PRPF8-205ENST00000572621 CALD1Q05682 793 aaKnown RBP17.37■□□□□ 0.37
PRPF8-205ENST00000572621 IPO8O15397 1037 aaKnown RBP17.37■□□□□ 0.37
PRPF8-205ENST00000572621 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
PRPF8-205ENST00000572621 GOLGA6L1Q8N7Z2 621 aa17.36■□□□□ 0.37
PRPF8-205ENST00000572621 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
PRPF8-205ENST00000572621 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
PRPF8-205ENST00000572621 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
PRPF8-205ENST00000572621 EEA1Q15075 1411 aa17.34■□□□□ 0.37
PRPF8-205ENST00000572621 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.37
PRPF8-205ENST00000572621 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.37
PRPF8-205ENST00000572621 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
PRPF8-205ENST00000572621 TPM4P67936 248 aa17.32■□□□□ 0.36
PRPF8-205ENST00000572621 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
PRPF8-205ENST00000572621 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
PRPF8-205ENST00000572621 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
PRPF8-205ENST00000572621 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
PRPF8-205ENST00000572621 PDE4CQ08493 712 aa17.29■□□□□ 0.36
PRPF8-205ENST00000572621 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
PRPF8-205ENST00000572621 TRIM6-TRIM34B2RNG4 842 aa17.28■□□□□ 0.36
PRPF8-205ENST00000572621 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
PRPF8-205ENST00000572621 CREBRFQ8IUR6 639 aa17.27■□□□□ 0.36
PRPF8-205ENST00000572621 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
PRPF8-205ENST00000572621 PMFBP1Q8TBY8 1022 aa17.27■□□□□ 0.36
PRPF8-205ENST00000572621 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
PRPF8-205ENST00000572621 U2AF1L5P0DN76 240 aaPredicted RBP17.27■□□□□ 0.35
PRPF8-205ENST00000572621 U2AF1Q01081 240 aaKnown RBP eCLIP17.27■□□□□ 0.352e-6■□□□□ 8.3
PRPF8-205ENST00000572621 FOXD4L5Q5VV16 416 aaPredicted RBP17.25■□□□□ 0.35
PRPF8-205ENST00000572621 FOXD4L4Q8WXT5 416 aaPredicted RBP17.25■□□□□ 0.35
PRPF8-205ENST00000572621 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
PRPF8-205ENST00000572621 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
PRPF8-205ENST00000572621 PHF14O94880 888 aa17.23■□□□□ 0.35
PRPF8-205ENST00000572621 CSPP1Q1MSJ5 1256 aa17.23■□□□□ 0.35
PRPF8-205ENST00000572621 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
PRPF8-205ENST00000572621 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
PRPF8-205ENST00000572621 FOXD1Q16676 465 aa17.22■□□□□ 0.35
PRPF8-205ENST00000572621 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
PRPF8-205ENST00000572621 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
PRPF8-205ENST00000572621 STK26Q9P289 416 aa17.21■□□□□ 0.35
PRPF8-205ENST00000572621 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
PRPF8-205ENST00000572621 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
PRPF8-205ENST00000572621 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.349e-6■■■■■ 50.1
PRPF8-205ENST00000572621 SLC4A3P48751 1232 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 PRM3Q9NNZ6 103 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 RALBP1Q15311 655 aa17.18■□□□□ 0.34
PRPF8-205ENST00000572621 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
PRPF8-205ENST00000572621 ST18O60284 1047 aa17.17■□□□□ 0.34
PRPF8-205ENST00000572621 TPM3P06753 285 aa17.17■□□□□ 0.34
PRPF8-205ENST00000572621 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
PRPF8-205ENST00000572621 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
PRPF8-205ENST00000572621 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
PRPF8-205ENST00000572621 DDX11L8A8MPP1 907 aa17.17■□□□□ 0.34
PRPF8-205ENST00000572621 GSE1Q14687 1217 aa17.16■□□□□ 0.34
PRPF8-205ENST00000572621 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
PRPF8-205ENST00000572621 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
PRPF8-205ENST00000572621 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
PRPF8-205ENST00000572621 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
PRPF8-205ENST00000572621 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
PRPF8-205ENST00000572621 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
PRPF8-205ENST00000572621 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
PRPF8-205ENST00000572621 KANK1Q14678 1352 aa17.14■□□□□ 0.33
PRPF8-205ENST00000572621 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
PRPF8-205ENST00000572621 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
PRPF8-205ENST00000572621 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
PRPF8-205ENST00000572621 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.33
PRPF8-205ENST00000572621 HMMRO75330 724 aa17.13■□□□□ 0.33
PRPF8-205ENST00000572621 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
PRPF8-205ENST00000572621 ZNF771Q7L3S4 317 aaPredicted RBP17.13■□□□□ 0.33
PRPF8-205ENST00000572621 PKD2Q13563 968 aa17.12■□□□□ 0.33
PRPF8-205ENST00000572621 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
PRPF8-205ENST00000572621 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
PRPF8-205ENST00000572621 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
PRPF8-205ENST00000572621 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
PRPF8-205ENST00000572621 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
PRPF8-205ENST00000572621 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
PRPF8-205ENST00000572621 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
PRPF8-205ENST00000572621 MLECQ14165 292 aa17.1■□□□□ 0.33
PRPF8-205ENST00000572621 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
PRPF8-205ENST00000572621 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
PRPF8-205ENST00000572621 PDE4AP27815 886 aa17.08■□□□□ 0.33
PRPF8-205ENST00000572621 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
PRPF8-205ENST00000572621 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
PRPF8-205ENST00000572621 BECN2A8MW95 431 aa17.07■□□□□ 0.32
PRPF8-205ENST00000572621 H3BQV1 296 aa17.07■□□□□ 0.32
PRPF8-205ENST00000572621 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
PRPF8-205ENST00000572621 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms