RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 DAPK1P53355 1430 aa30.43■■■□□ 2.46
CHRNE-202ENST00000572438 DNMT1P26358 1616 aaKnown RBP30.43■■■□□ 2.46
CHRNE-202ENST00000572438 NAIPQ13075 1403 aa30.41■■■□□ 2.46
CHRNE-202ENST00000572438 AKNAQ7Z591 1439 aa30.41■■■□□ 2.46
CHRNE-202ENST00000572438 ABCC5O15440 1437 aa30.4■■■□□ 2.46
CHRNE-202ENST00000572438 ZNF777Q9ULD5 760 aaPredicted RBP30.38■■■□□ 2.45
CHRNE-202ENST00000572438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.37■■■□□ 2.45
CHRNE-202ENST00000572438 CHIC2Q9UKJ5 165 aa30.37■■■□□ 2.45
CHRNE-202ENST00000572438 TTC37Q6PGP7 1564 aa30.35■■■□□ 2.45
CHRNE-202ENST00000572438 PREX2Q70Z35 1606 aa30.35■■■□□ 2.45
CHRNE-202ENST00000572438 ROCK1Q13464 1354 aa30.34■■■□□ 2.45
CHRNE-202ENST00000572438 KCNH8Q96L42 1107 aa30.31■■■□□ 2.44
CHRNE-202ENST00000572438 RRP7BPQ9NSQ0 103 aa30.31■■■□□ 2.44
CHRNE-202ENST00000572438 GCC2Q8IWJ2 1684 aa30.31■■■□□ 2.44
CHRNE-202ENST00000572438 CDC42BPBQ9Y5S2 1711 aa30.28■■■□□ 2.44
CHRNE-202ENST00000572438 WDR7Q9Y4E6 1490 aa30.27■■■□□ 2.44
CHRNE-202ENST00000572438 CYB5RLQ6IPT4 315 aa30.26■■■□□ 2.44
CHRNE-202ENST00000572438 CROCC2H7BZ55 1655 aa30.24■■■□□ 2.43
CHRNE-202ENST00000572438 MYO5CQ9NQX4 1742 aa30.23■■■□□ 2.43
CHRNE-202ENST00000572438 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
CHRNE-202ENST00000572438 ARHGAP5Q13017 1502 aa30.23■■■□□ 2.43
CHRNE-202ENST00000572438 SAMD9LQ8IVG5 1584 aa30.22■■■□□ 2.43
CHRNE-202ENST00000572438 SHANK2Q9UPX8 1470 aa30.2■■■□□ 2.43
CHRNE-202ENST00000572438 ARHGEF5Q12774 1597 aa30.2■■■□□ 2.43
CHRNE-202ENST00000572438 PLCH2O75038 1416 aa30.2■■■□□ 2.42
CHRNE-202ENST00000572438 ADGRL2O95490 1459 aa30.2■■■□□ 2.42
CHRNE-202ENST00000572438 NPM1P06748 294 aaKnown RBP eCLIP30.19■■■□□ 2.42
CHRNE-202ENST00000572438 ASXL2Q76L83 1435 aa30.19■■■□□ 2.42
CHRNE-202ENST00000572438 MBD5Q9P267 1494 aa30.18■■■□□ 2.42
CHRNE-202ENST00000572438 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
CHRNE-202ENST00000572438 NCOA1Q15788 1441 aa30.17■■■□□ 2.42
CHRNE-202ENST00000572438 HNRNPMP52272 730 aaKnown RBP eCLIP30.15■■■□□ 2.42
CHRNE-202ENST00000572438 KDM6BO15054 1643 aa30.14■■■□□ 2.42
CHRNE-202ENST00000572438 PLEKHH2Q8IVE3 1493 aa30.13■■■□□ 2.41
CHRNE-202ENST00000572438 RSPH4AQ5TD94 716 aa30.13■■■□□ 2.41
CHRNE-202ENST00000572438 ANKRD30AQ9BXX3 1397 aa30.13■■■□□ 2.41
CHRNE-202ENST00000572438 C9orf84Q5VXU9 1444 aa30.12■■■□□ 2.41
CHRNE-202ENST00000572438 CCDC141Q6ZP82 1450 aa30.12■■■□□ 2.41
CHRNE-202ENST00000572438 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
CHRNE-202ENST00000572438 KIAA1107Q9UPP5 1409 aa30.12■■■□□ 2.41
CHRNE-202ENST00000572438 ARAP3Q8WWN8 1544 aa30.12■■■□□ 2.41
CHRNE-202ENST00000572438 TSPY4P0CV99 314 aa30.1■■■□□ 2.41
CHRNE-202ENST00000572438 TSPY10P0CW01 314 aa30.1■■■□□ 2.41
CHRNE-202ENST00000572438 SYCP2Q9BX26 1530 aa30.1■■■□□ 2.41
CHRNE-202ENST00000572438 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
CHRNE-202ENST00000572438 ABCA9Q8IUA7 1624 aa30.09■■■□□ 2.41
CHRNE-202ENST00000572438 TRIM52Q96A61 297 aa30.03■■■□□ 2.4
CHRNE-202ENST00000572438 ABCC1P33527 1531 aa30■■■□□ 2.39
CHRNE-202ENST00000572438 ARHGEF12Q9NZN5 1544 aa29.99■■■□□ 2.39
CHRNE-202ENST00000572438 MAST1Q9Y2H9 1570 aa29.99■■■□□ 2.39
CHRNE-202ENST00000572438 ANKRD50Q9ULJ7 1429 aa29.97■■■□□ 2.39
CHRNE-202ENST00000572438 KIF15Q9NS87 1388 aa29.95■■■□□ 2.38
CHRNE-202ENST00000572438 SIN3AQ96ST3 1273 aa29.94■■■□□ 2.38
CHRNE-202ENST00000572438 FANCAO15360 1455 aa29.94■■■□□ 2.38
CHRNE-202ENST00000572438 DENND4BO75064 1496 aaPredicted RBP29.93■■■□□ 2.38
CHRNE-202ENST00000572438 MPHOSPH9Q99550 1183 aa29.93■■■□□ 2.38
CHRNE-202ENST00000572438 NEUROD1Q13562 356 aa29.88■■■□□ 2.37
CHRNE-202ENST00000572438 TIMELESSQ9UNS1 1208 aa29.88■■■□□ 2.37
CHRNE-202ENST00000572438 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
CHRNE-202ENST00000572438 PLXNC1O60486 1568 aa29.87■■■□□ 2.37
CHRNE-202ENST00000572438 CD109Q6YHK3 1445 aa29.84■■■□□ 2.37
CHRNE-202ENST00000572438 PZPP20742 1482 aa29.83■■■□□ 2.37
CHRNE-202ENST00000572438 ADGRL1O94910 1474 aa29.81■■■□□ 2.36
CHRNE-202ENST00000572438 SLC4A1APQ9BWU0 796 aaKnown RBP29.81■■■□□ 2.36
CHRNE-202ENST00000572438 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
CHRNE-202ENST00000572438 SCAPERQ9BY12 1400 aa29.78■■■□□ 2.36
CHRNE-202ENST00000572438 AFAP1Q8N556 730 aa29.77■■■□□ 2.36
CHRNE-202ENST00000572438 SPAG9O60271 1321 aaKnown RBP29.77■■■□□ 2.36
CHRNE-202ENST00000572438 KDM5DQ9BY66 1539 aa29.76■■■□□ 2.35
CHRNE-202ENST00000572438 DUOX2Q9NRD8 1548 aa29.76■■■□□ 2.35
CHRNE-202ENST00000572438 CFAP74Q9C0B2 1584 aa29.75■■■□□ 2.35
CHRNE-202ENST00000572438 NUP155O75694 1391 aa29.74■■■□□ 2.35
CHRNE-202ENST00000572438 ZFYVE16Q7Z3T8 1539 aa29.73■■■□□ 2.35
CHRNE-202ENST00000572438 ZNF316A6NFI3 1004 aaPredicted RBP29.73■■■□□ 2.35
CHRNE-202ENST00000572438 TONSLQ96HA7 1378 aa29.72■■■□□ 2.35
CHRNE-202ENST00000572438 ANKRD30BQ9BXX2 1392 aa29.72■■■□□ 2.35
CHRNE-202ENST00000572438 FOXD1Q16676 465 aa29.71■■■□□ 2.35
CHRNE-202ENST00000572438 ERBINQ96RT1 1412 aa29.7■■■□□ 2.35
CHRNE-202ENST00000572438 GLI2P10070 1586 aa29.7■■■□□ 2.34
CHRNE-202ENST00000572438 INO80Q9ULG1 1556 aaPredicted RBP29.68■■■□□ 2.34
CHRNE-202ENST00000572438 ATP7AQ04656 1500 aa29.66■■■□□ 2.34
CHRNE-202ENST00000572438 NEO1Q92859 1461 aa29.66■■■□□ 2.34
CHRNE-202ENST00000572438 UNC13BO14795 1591 aa29.65■■■□□ 2.34
CHRNE-202ENST00000572438 MAP3K4Q9Y6R4 1608 aa29.65■■■□□ 2.34
CHRNE-202ENST00000572438 ZNF518AQ6AHZ1 1483 aa29.65■■■□□ 2.34
CHRNE-202ENST00000572438 PPP1R15AO75807 674 aaPredicted RBP29.64■■■□□ 2.34
CHRNE-202ENST00000572438 PKD2Q13563 968 aa29.64■■■□□ 2.33
CHRNE-202ENST00000572438 POGZQ7Z3K3 1410 aa29.6■■■□□ 2.33
CHRNE-202ENST00000572438 FAM135AQ9P2D6 1515 aa29.6■■■□□ 2.33
CHRNE-202ENST00000572438 DIP2BQ9P265 1576 aa29.6■■■□□ 2.33
CHRNE-202ENST00000572438 RPRD2Q5VT52 1461 aaKnown RBP29.59■■■□□ 2.33
CHRNE-202ENST00000572438 MAGI2Q86UL8 1455 aa29.57■■■□□ 2.32
CHRNE-202ENST00000572438 KDM5CP41229 1560 aa29.56■■■□□ 2.32
CHRNE-202ENST00000572438 FAM69CQ0P6D2 419 aa29.55■■■□□ 2.32
CHRNE-202ENST00000572438 MYT1LQ9UL68 1186 aa29.54■■■□□ 2.32
CHRNE-202ENST00000572438 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
CHRNE-202ENST00000572438 KIF13AQ9H1H9 1805 aa29.53■■■□□ 2.32
CHRNE-202ENST00000572438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.52■■■□□ 2.32
CHRNE-202ENST00000572438 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.32
CHRNE-202ENST00000572438 MLH3Q9UHC1 1453 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms