RNA–Protein interactions for RNA: ENST00000572102.5

TVP23A-204, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 5

Gene TVP23A, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-204ENST00000572102 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
TVP23A-204ENST00000572102 LRRIQ1Q96JM4 1722 aa14.06□□□□□ -0.16
TVP23A-204ENST00000572102 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
TVP23A-204ENST00000572102 CDK13Q14004 1512 aaKnown RBP14.06□□□□□ -0.16
TVP23A-204ENST00000572102 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
TVP23A-204ENST00000572102 FGD1P98174 961 aa14.05□□□□□ -0.16
TVP23A-204ENST00000572102 MAGI3Q5TCQ9 1506 aa14.05□□□□□ -0.16
TVP23A-204ENST00000572102 TAF7LQ5H9L4 462 aa14.04□□□□□ -0.16
TVP23A-204ENST00000572102 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
TVP23A-204ENST00000572102 IRX6P78412 446 aaPredicted RBP14.04□□□□□ -0.16
TVP23A-204ENST00000572102 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
TVP23A-204ENST00000572102 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
TVP23A-204ENST00000572102 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
TVP23A-204ENST00000572102 ZNF644Q9H582 1327 aaPredicted RBP14.03□□□□□ -0.16
TVP23A-204ENST00000572102 FOXD1Q16676 465 aa14.01□□□□□ -0.17
TVP23A-204ENST00000572102 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
TVP23A-204ENST00000572102 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
TVP23A-204ENST00000572102 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
TVP23A-204ENST00000572102 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
TVP23A-204ENST00000572102 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
TVP23A-204ENST00000572102 IGSF3O75054 1194 aa13.98□□□□□ -0.17
TVP23A-204ENST00000572102 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
TVP23A-204ENST00000572102 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
TVP23A-204ENST00000572102 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
TVP23A-204ENST00000572102 DISP1Q96F81 1524 aa13.96□□□□□ -0.17
TVP23A-204ENST00000572102 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
TVP23A-204ENST00000572102 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-204ENST00000572102 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
TVP23A-204ENST00000572102 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
TVP23A-204ENST00000572102 KIAA0556O60303 1618 aa13.94□□□□□ -0.18
TVP23A-204ENST00000572102 NAIPQ13075 1403 aa13.94□□□□□ -0.18
TVP23A-204ENST00000572102 PPP1R15AO75807 674 aaPredicted RBP13.93□□□□□ -0.18
TVP23A-204ENST00000572102 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
TVP23A-204ENST00000572102 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
TVP23A-204ENST00000572102 SUPT6HQ7KZ85 1726 aaKnown RBP13.92□□□□□ -0.18
TVP23A-204ENST00000572102 SALL2Q9Y467 1007 aaPredicted RBP13.92□□□□□ -0.18
TVP23A-204ENST00000572102 PLB1Q6P1J6 1458 aa13.91□□□□□ -0.18
TVP23A-204ENST00000572102 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
TVP23A-204ENST00000572102 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
TVP23A-204ENST00000572102 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
TVP23A-204ENST00000572102 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
TVP23A-204ENST00000572102 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
TVP23A-204ENST00000572102 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
TVP23A-204ENST00000572102 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
TVP23A-204ENST00000572102 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
TVP23A-204ENST00000572102 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
TVP23A-204ENST00000572102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.86□□□□□ -0.19
TVP23A-204ENST00000572102 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
TVP23A-204ENST00000572102 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
TVP23A-204ENST00000572102 KDM6BO15054 1643 aa13.86□□□□□ -0.19
TVP23A-204ENST00000572102 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
TVP23A-204ENST00000572102 UACAQ9BZF9 1416 aa13.85□□□□□ -0.19
TVP23A-204ENST00000572102 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
TVP23A-204ENST00000572102 CDK11BP21127 795 aaKnown RBP13.84□□□□□ -0.19
TVP23A-204ENST00000572102 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
TVP23A-204ENST00000572102 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
TVP23A-204ENST00000572102 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
TVP23A-204ENST00000572102 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
TVP23A-204ENST00000572102 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
TVP23A-204ENST00000572102 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
TVP23A-204ENST00000572102 RAPGEF6Q8TEU7 1601 aa13.78□□□□□ -0.2
TVP23A-204ENST00000572102 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
TVP23A-204ENST00000572102 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
TVP23A-204ENST00000572102 ABCC5O15440 1437 aa13.78□□□□□ -0.2
TVP23A-204ENST00000572102 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
TVP23A-204ENST00000572102 DAPK1P53355 1430 aa13.77□□□□□ -0.21
TVP23A-204ENST00000572102 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
TVP23A-204ENST00000572102 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
TVP23A-204ENST00000572102 HNRNPMP52272 730 aaKnown RBP eCLIP13.76□□□□□ -0.21
TVP23A-204ENST00000572102 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
TVP23A-204ENST00000572102 ABCA8O94911 1581 aa13.75□□□□□ -0.21
TVP23A-204ENST00000572102 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
TVP23A-204ENST00000572102 AAMPQ13685 434 aa13.74□□□□□ -0.21
TVP23A-204ENST00000572102 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
TVP23A-204ENST00000572102 KIF14Q15058 1648 aa13.74□□□□□ -0.21
TVP23A-204ENST00000572102 HSPA5P11021 654 aaKnown RBP13.74□□□□□ -0.21
TVP23A-204ENST00000572102 PTPRGP23470 1445 aa13.74□□□□□ -0.21
TVP23A-204ENST00000572102 GPATCH8Q9UKJ3 1502 aaKnown RBP13.71□□□□□ -0.21
TVP23A-204ENST00000572102 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
TVP23A-204ENST00000572102 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
TVP23A-204ENST00000572102 ATP10BO94823 1461 aa13.7□□□□□ -0.22
TVP23A-204ENST00000572102 ANP32CO43423 234 aa13.7□□□□□ -0.22
TVP23A-204ENST00000572102 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
TVP23A-204ENST00000572102 CAMSAP2Q08AD1 1489 aa13.69□□□□□ -0.22
TVP23A-204ENST00000572102 PKD2Q13563 968 aa13.68□□□□□ -0.22
TVP23A-204ENST00000572102 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-204ENST00000572102 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
TVP23A-204ENST00000572102 KDM5BQ9UGL1 1544 aa13.66□□□□□ -0.22
TVP23A-204ENST00000572102 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
TVP23A-204ENST00000572102 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
TVP23A-204ENST00000572102 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 EIF4G2P78344 907 aaKnown RBP eCLIP13.65□□□□□ -0.22
TVP23A-204ENST00000572102 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
TVP23A-204ENST00000572102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
TVP23A-204ENST00000572102 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms