RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
SMG6-204ENST00000570606 KIF21BO75037 1637 aa10.93□□□□□ -0.66
SMG6-204ENST00000570606 EEA1Q15075 1411 aa10.92□□□□□ -0.66
SMG6-204ENST00000570606 ABCA9Q8IUA7 1624 aa10.92□□□□□ -0.66
SMG6-204ENST00000570606 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
SMG6-204ENST00000570606 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
SMG6-204ENST00000570606 ATP10BO94823 1461 aa10.92□□□□□ -0.66
SMG6-204ENST00000570606 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
SMG6-204ENST00000570606 RANGAP1P46060 587 aaPredicted RBP10.89□□□□□ -0.67
SMG6-204ENST00000570606 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
SMG6-204ENST00000570606 DSG3P32926 999 aa10.88□□□□□ -0.67
SMG6-204ENST00000570606 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
SMG6-204ENST00000570606 NUP153P49790 1475 aaKnown RBP10.87□□□□□ -0.67
SMG6-204ENST00000570606 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
SMG6-204ENST00000570606 NEO1Q92859 1461 aa10.85□□□□□ -0.67
SMG6-204ENST00000570606 CFAP74Q9C0B2 1584 aa10.85□□□□□ -0.67
SMG6-204ENST00000570606 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
SMG6-204ENST00000570606 FRMPD1Q5SYB0 1578 aa10.84□□□□□ -0.67
SMG6-204ENST00000570606 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
SMG6-204ENST00000570606 TTC37Q6PGP7 1564 aa10.82□□□□□ -0.68
SMG6-204ENST00000570606 RICTORQ6R327 1708 aa10.81□□□□□ -0.68
SMG6-204ENST00000570606 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
SMG6-204ENST00000570606 RAPGEF3O95398 923 aa10.8□□□□□ -0.68
SMG6-204ENST00000570606 BCORL1Q5H9F3 1711 aa10.8□□□□□ -0.68
SMG6-204ENST00000570606 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
SMG6-204ENST00000570606 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
SMG6-204ENST00000570606 HECW1Q76N89 1606 aa10.79□□□□□ -0.68
SMG6-204ENST00000570606 MADDQ8WXG6 1647 aa10.79□□□□□ -0.68
SMG6-204ENST00000570606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMG6-204ENST00000570606 PLEKHD1A6NEE1 506 aa10.78□□□□□ -0.68
SMG6-204ENST00000570606 FANCAO15360 1455 aa10.78□□□□□ -0.68
SMG6-204ENST00000570606 DENND4BO75064 1496 aaPredicted RBP10.78□□□□□ -0.68
SMG6-204ENST00000570606 PTPRMP28827 1452 aa10.77□□□□□ -0.69
SMG6-204ENST00000570606 ARID4BQ4LE39 1312 aaPredicted RBP10.77□□□□□ -0.69
SMG6-204ENST00000570606 AKNAQ7Z591 1439 aa10.76□□□□□ -0.69
SMG6-204ENST00000570606 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
SMG6-204ENST00000570606 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
SMG6-204ENST00000570606 MYO5CQ9NQX4 1742 aa10.75□□□□□ -0.69
SMG6-204ENST00000570606 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
SMG6-204ENST00000570606 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
SMG6-204ENST00000570606 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
SMG6-204ENST00000570606 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
SMG6-204ENST00000570606 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
SMG6-204ENST00000570606 KIF14Q15058 1648 aa10.73□□□□□ -0.69
SMG6-204ENST00000570606 ATP1B4Q9UN42 357 aaPredicted RBP10.72□□□□□ -0.69
SMG6-204ENST00000570606 ARHGAP35Q9NRY4 1499 aa10.72□□□□□ -0.69
SMG6-204ENST00000570606 PCF11O94913 1555 aaKnown RBP10.72□□□□□ -0.69
SMG6-204ENST00000570606 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
SMG6-204ENST00000570606 POGZQ7Z3K3 1410 aa10.71□□□□□ -0.69
SMG6-204ENST00000570606 SIGLEC1Q9BZZ2 1709 aa10.7□□□□□ -0.7
SMG6-204ENST00000570606 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
SMG6-204ENST00000570606 MAGI2Q86UL8 1455 aa10.69□□□□□ -0.7
SMG6-204ENST00000570606 YEATS2Q9ULM3 1422 aa10.69□□□□□ -0.7
SMG6-204ENST00000570606 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
SMG6-204ENST00000570606 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
SMG6-204ENST00000570606 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
SMG6-204ENST00000570606 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
SMG6-204ENST00000570606 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
SMG6-204ENST00000570606 PLCH2O75038 1416 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 CLIP1P30622 1438 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 SCAPERQ9BY12 1400 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 CDK11AQ9UQ88 783 aaPredicted RBP10.68□□□□□ -0.7
SMG6-204ENST00000570606 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
SMG6-204ENST00000570606 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
SMG6-204ENST00000570606 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
SMG6-204ENST00000570606 MLECQ14165 292 aa10.65□□□□□ -0.7
SMG6-204ENST00000570606 ZNF518AQ6AHZ1 1483 aa10.65□□□□□ -0.7
SMG6-204ENST00000570606 C9orf84Q5VXU9 1444 aa10.65□□□□□ -0.7
SMG6-204ENST00000570606 CCDC18Q5T9S5 1454 aa10.64□□□□□ -0.71
SMG6-204ENST00000570606 EFCAB2Q5VUJ9 269 aa10.64□□□□□ -0.71
SMG6-204ENST00000570606 PREX2Q70Z35 1606 aa10.64□□□□□ -0.71
SMG6-204ENST00000570606 KDM5CP41229 1560 aa10.64□□□□□ -0.71
SMG6-204ENST00000570606 CDC42BPBQ9Y5S2 1711 aa10.64□□□□□ -0.71
SMG6-204ENST00000570606 ATP10AO60312 1499 aa10.62□□□□□ -0.71
SMG6-204ENST00000570606 ITSN2Q9NZM3 1697 aa10.62□□□□□ -0.71
SMG6-204ENST00000570606 ARHGEF12Q9NZN5 1544 aa10.62□□□□□ -0.71
SMG6-204ENST00000570606 DIP2CQ9Y2E4 1556 aa10.61□□□□□ -0.71
SMG6-204ENST00000570606 PREX1Q8TCU6 1659 aa10.61□□□□□ -0.71
SMG6-204ENST00000570606 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
SMG6-204ENST00000570606 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
SMG6-204ENST00000570606 CASKIN1Q8WXD9 1431 aa10.6□□□□□ -0.71
SMG6-204ENST00000570606 ABCC1P33527 1531 aa10.6□□□□□ -0.71
SMG6-204ENST00000570606 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
SMG6-204ENST00000570606 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
SMG6-204ENST00000570606 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
SMG6-204ENST00000570606 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
SMG6-204ENST00000570606 HSPA2P54652 639 aa10.58□□□□□ -0.72
SMG6-204ENST00000570606 AFAP1Q8N556 730 aa10.56□□□□□ -0.72
SMG6-204ENST00000570606 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
SMG6-204ENST00000570606 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
SMG6-204ENST00000570606 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
SMG6-204ENST00000570606 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
SMG6-204ENST00000570606 KIDINS220Q9ULH0 1771 aa10.54□□□□□ -0.72
SMG6-204ENST00000570606 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
SMG6-204ENST00000570606 C3P01024 1663 aa10.54□□□□□ -0.72
SMG6-204ENST00000570606 SAMD9LQ8IVG5 1584 aa10.54□□□□□ -0.72
SMG6-204ENST00000570606 UHRF1BP1Q6BDS2 1440 aa10.53□□□□□ -0.72
SMG6-204ENST00000570606 AGLP35573 1532 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms