RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
GDE1-205ENST00000569899 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
GDE1-205ENST00000569899 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
GDE1-205ENST00000569899 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
GDE1-205ENST00000569899 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
GDE1-205ENST00000569899 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.09
GDE1-205ENST00000569899 PLEKHG5O94827 1062 aa15.58■□□□□ 0.09
GDE1-205ENST00000569899 CREBZFQ9NS37 354 aa15.58■□□□□ 0.09
GDE1-205ENST00000569899 ABCA8O94911 1581 aa15.57■□□□□ 0.08
GDE1-205ENST00000569899 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
GDE1-205ENST00000569899 NUP153P49790 1475 aaKnown RBP15.55■□□□□ 0.08
GDE1-205ENST00000569899 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
GDE1-205ENST00000569899 CDK13Q14004 1512 aaKnown RBP15.54■□□□□ 0.08
GDE1-205ENST00000569899 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
GDE1-205ENST00000569899 EPRSP07814 1512 aaKnown RBP15.53■□□□□ 0.08
GDE1-205ENST00000569899 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
GDE1-205ENST00000569899 SPOCK2Q92563 424 aa15.52■□□□□ 0.08
GDE1-205ENST00000569899 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
GDE1-205ENST00000569899 PTPRGP23470 1445 aa15.51■□□□□ 0.07
GDE1-205ENST00000569899 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
GDE1-205ENST00000569899 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
GDE1-205ENST00000569899 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
GDE1-205ENST00000569899 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
GDE1-205ENST00000569899 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
GDE1-205ENST00000569899 ARID3CA6NKF2 412 aa15.46■□□□□ 0.06
GDE1-205ENST00000569899 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.06
GDE1-205ENST00000569899 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
GDE1-205ENST00000569899 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
GDE1-205ENST00000569899 UACAQ9BZF9 1416 aa15.44■□□□□ 0.06
GDE1-205ENST00000569899 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
GDE1-205ENST00000569899 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
GDE1-205ENST00000569899 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
GDE1-205ENST00000569899 TRIM26Q12899 539 aaPredicted RBP15.43■□□□□ 0.06
GDE1-205ENST00000569899 MTUS2Q5JR59 1369 aa15.42■□□□□ 0.06
GDE1-205ENST00000569899 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
GDE1-205ENST00000569899 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
GDE1-205ENST00000569899 ZCCHC11Q5TAX3 1644 aaKnown RBP15.41■□□□□ 0.06
GDE1-205ENST00000569899 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
GDE1-205ENST00000569899 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
GDE1-205ENST00000569899 ATP10BO94823 1461 aa15.4■□□□□ 0.06
GDE1-205ENST00000569899 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
GDE1-205ENST00000569899 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
GDE1-205ENST00000569899 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
GDE1-205ENST00000569899 KIF14Q15058 1648 aa15.37■□□□□ 0.05
GDE1-205ENST00000569899 NCOA2Q15596 1464 aa15.37■□□□□ 0.05
GDE1-205ENST00000569899 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
GDE1-205ENST00000569899 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
GDE1-205ENST00000569899 KDM5BQ9UGL1 1544 aa15.34■□□□□ 0.05
GDE1-205ENST00000569899 NUBP1P53384 320 aa15.33■□□□□ 0.04
GDE1-205ENST00000569899 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
GDE1-205ENST00000569899 PKD2Q13563 968 aa15.32■□□□□ 0.04
GDE1-205ENST00000569899 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
GDE1-205ENST00000569899 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
GDE1-205ENST00000569899 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
GDE1-205ENST00000569899 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
GDE1-205ENST00000569899 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
GDE1-205ENST00000569899 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
GDE1-205ENST00000569899 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.03
GDE1-205ENST00000569899 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
GDE1-205ENST00000569899 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
GDE1-205ENST00000569899 TTC37Q6PGP7 1564 aa15.26■□□□□ 0.03
GDE1-205ENST00000569899 ABCC10Q5T3U5 1492 aa15.25■□□□□ 0.03
GDE1-205ENST00000569899 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
GDE1-205ENST00000569899 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
GDE1-205ENST00000569899 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
GDE1-205ENST00000569899 PREX2Q70Z35 1606 aa15.22■□□□□ 0.03
GDE1-205ENST00000569899 MYO5CQ9NQX4 1742 aa15.22■□□□□ 0.03
GDE1-205ENST00000569899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
GDE1-205ENST00000569899 WDR7Q9Y4E6 1490 aa15.21■□□□□ 0.03
GDE1-205ENST00000569899 CDC42BPBQ9Y5S2 1711 aa15.21■□□□□ 0.02
GDE1-205ENST00000569899 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
GDE1-205ENST00000569899 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
GDE1-205ENST00000569899 DCAF8Q5TAQ9 597 aa15.18■□□□□ 0.02
GDE1-205ENST00000569899 ASXL2Q76L83 1435 aa15.18■□□□□ 0.02
GDE1-205ENST00000569899 MIA2Q96PC5 1412 aa15.18■□□□□ 0.02
GDE1-205ENST00000569899 GSE1Q14687 1217 aa15.17■□□□□ 0.02
GDE1-205ENST00000569899 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
GDE1-205ENST00000569899 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
GDE1-205ENST00000569899 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
GDE1-205ENST00000569899 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
GDE1-205ENST00000569899 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
GDE1-205ENST00000569899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.15■□□□□ 0.02
GDE1-205ENST00000569899 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
GDE1-205ENST00000569899 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
GDE1-205ENST00000569899 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
GDE1-205ENST00000569899 DNMT1P26358 1616 aaKnown RBP15.13■□□□□ 0.01
GDE1-205ENST00000569899 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
GDE1-205ENST00000569899 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
GDE1-205ENST00000569899 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
GDE1-205ENST00000569899 ITGAEP38570 1179 aa15.11■□□□□ 0.01
GDE1-205ENST00000569899 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
GDE1-205ENST00000569899 PTPRKQ15262 1439 aa15.08■□□□□ 0
GDE1-205ENST00000569899 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
GDE1-205ENST00000569899 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
GDE1-205ENST00000569899 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
GDE1-205ENST00000569899 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
GDE1-205ENST00000569899 DAPK1P53355 1430 aa15.06■□□□□ 0
GDE1-205ENST00000569899 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
GDE1-205ENST00000569899 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
GDE1-205ENST00000569899 DIP2BQ9P265 1576 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms