RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 BCORL1Q5H9F3 1711 aa8.78□□□□□ -1
CYLD-216ENST00000569891 TTC37Q6PGP7 1564 aa8.78□□□□□ -1
CYLD-216ENST00000569891 ITSN2Q9NZM3 1697 aa8.77□□□□□ -1.01
CYLD-216ENST00000569891 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
CYLD-216ENST00000569891 UACAQ9BZF9 1416 aa8.77□□□□□ -1.01
CYLD-216ENST00000569891 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
CYLD-216ENST00000569891 NUP153P49790 1475 aaKnown RBP8.77□□□□□ -1.01
CYLD-216ENST00000569891 ABCA9Q8IUA7 1624 aa8.76□□□□□ -1.01
CYLD-216ENST00000569891 CFDP1Q9UEE9 299 aaPredicted RBP8.76□□□□□ -1.01
CYLD-216ENST00000569891 AKNAQ7Z591 1439 aa8.76□□□□□ -1.01
CYLD-216ENST00000569891 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
CYLD-216ENST00000569891 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
CYLD-216ENST00000569891 PTPN23Q9H3S7 1636 aa8.75□□□□□ -1.01
CYLD-216ENST00000569891 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
CYLD-216ENST00000569891 CDK13Q14004 1512 aaKnown RBP8.74□□□□□ -1.01
CYLD-216ENST00000569891 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
CYLD-216ENST00000569891 PLB1Q6P1J6 1458 aa8.73□□□□□ -1.01
CYLD-216ENST00000569891 TSPY4P0CV99 314 aa8.73□□□□□ -1.01
CYLD-216ENST00000569891 TSPY10P0CW01 314 aa8.73□□□□□ -1.01
CYLD-216ENST00000569891 PLEKHH2Q8IVE3 1493 aa8.73□□□□□ -1.01
CYLD-216ENST00000569891 HFM1A2PYH4 1435 aa8.72□□□□□ -1.01
CYLD-216ENST00000569891 ROCK1Q13464 1354 aa8.72□□□□□ -1.01
CYLD-216ENST00000569891 ARID3CA6NKF2 412 aa8.72□□□□□ -1.01
CYLD-216ENST00000569891 UHRF1BP1LA0JNW5 1464 aa8.72□□□□□ -1.01
CYLD-216ENST00000569891 SETD1AO15047 1707 aaKnown RBP8.71□□□□□ -1.02
CYLD-216ENST00000569891 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
CYLD-216ENST00000569891 DIP2BQ9P265 1576 aa8.7□□□□□ -1.02
CYLD-216ENST00000569891 CENPFP49454 3210 aa8.7□□□□□ -1.02
CYLD-216ENST00000569891 ANKRD30AQ9BXX3 1397 aa8.7□□□□□ -1.02
CYLD-216ENST00000569891 ATP10BO94823 1461 aa8.69□□□□□ -1.02
CYLD-216ENST00000569891 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
CYLD-216ENST00000569891 ZNF777Q9ULD5 760 aaPredicted RBP8.68□□□□□ -1.02
CYLD-216ENST00000569891 ARHGEF12Q9NZN5 1544 aa8.66□□□□□ -1.02
CYLD-216ENST00000569891 DAPK1P53355 1430 aa8.66□□□□□ -1.02
CYLD-216ENST00000569891 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
CYLD-216ENST00000569891 EFCAB2Q5VUJ9 269 aa8.66□□□□□ -1.02
CYLD-216ENST00000569891 IFT172Q9UG01 1749 aa8.66□□□□□ -1.02
CYLD-216ENST00000569891 KIDINS220Q9ULH0 1771 aa8.65□□□□□ -1.02
CYLD-216ENST00000569891 ZNF316A6NFI3 1004 aaPredicted RBP8.65□□□□□ -1.02
CYLD-216ENST00000569891 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.02
CYLD-216ENST00000569891 GPATCH8Q9UKJ3 1502 aaKnown RBP8.65□□□□□ -1.02
CYLD-216ENST00000569891 CAMSAP2Q08AD1 1489 aa8.65□□□□□ -1.02
CYLD-216ENST00000569891 ABCC10Q5T3U5 1492 aa8.65□□□□□ -1.02
CYLD-216ENST00000569891 SHANK2Q9UPX8 1470 aa8.65□□□□□ -1.02
CYLD-216ENST00000569891 TONSLQ96HA7 1378 aa8.65□□□□□ -1.02
CYLD-216ENST00000569891 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
CYLD-216ENST00000569891 NAIPQ13075 1403 aa8.63□□□□□ -1.03
CYLD-216ENST00000569891 GCC2Q8IWJ2 1684 aa8.63□□□□□ -1.03
CYLD-216ENST00000569891 RRP7BPQ9NSQ0 103 aa8.63□□□□□ -1.03
CYLD-216ENST00000569891 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
CYLD-216ENST00000569891 MYO5BQ9ULV0 1848 aa8.63□□□□□ -1.03
CYLD-216ENST00000569891 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
CYLD-216ENST00000569891 ARHGAP5Q13017 1502 aa8.62□□□□□ -1.03
CYLD-216ENST00000569891 COL17A1Q9UMD9 1497 aaPredicted RBP8.62□□□□□ -1.03
CYLD-216ENST00000569891 ARHGEF5Q12774 1597 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 CCDC141Q6ZP82 1450 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 ADGRL2O95490 1459 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 ABCC5O15440 1437 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
CYLD-216ENST00000569891 ARAP3Q8WWN8 1544 aa8.61□□□□□ -1.03
CYLD-216ENST00000569891 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
CYLD-216ENST00000569891 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
CYLD-216ENST00000569891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.59□□□□□ -1.03
CYLD-216ENST00000569891 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
CYLD-216ENST00000569891 MYO5CQ9NQX4 1742 aa8.59□□□□□ -1.03
CYLD-216ENST00000569891 WDR7Q9Y4E6 1490 aa8.59□□□□□ -1.03
CYLD-216ENST00000569891 PLCH2O75038 1416 aa8.58□□□□□ -1.04
CYLD-216ENST00000569891 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
CYLD-216ENST00000569891 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
CYLD-216ENST00000569891 INO80Q9ULG1 1556 aaPredicted RBP8.58□□□□□ -1.04
CYLD-216ENST00000569891 PTPRKQ15262 1439 aa8.57□□□□□ -1.04
CYLD-216ENST00000569891 ANKRD50Q9ULJ7 1429 aa8.57□□□□□ -1.04
CYLD-216ENST00000569891 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
CYLD-216ENST00000569891 NCOA1Q15788 1441 aa8.57□□□□□ -1.04
CYLD-216ENST00000569891 MYT1LQ9UL68 1186 aa8.57□□□□□ -1.04
CYLD-216ENST00000569891 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
CYLD-216ENST00000569891 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
CYLD-216ENST00000569891 LAMA3Q16787 3333 aa8.56□□□□□ -1.04
CYLD-216ENST00000569891 CFAP74Q9C0B2 1584 aa8.56□□□□□ -1.04
CYLD-216ENST00000569891 MAPKBP1O60336 1514 aa8.55□□□□□ -1.04
CYLD-216ENST00000569891 KIF15Q9NS87 1388 aa8.55□□□□□ -1.04
CYLD-216ENST00000569891 CEP152O94986 1710 aa8.55□□□□□ -1.04
CYLD-216ENST00000569891 MARF1Q9Y4F3 1742 aaKnown RBP8.55□□□□□ -1.04
CYLD-216ENST00000569891 KANK1Q14678 1352 aa8.54□□□□□ -1.04
CYLD-216ENST00000569891 VWDEQ8N2E2 1590 aa8.54□□□□□ -1.04
CYLD-216ENST00000569891 MAST1Q9Y2H9 1570 aa8.54□□□□□ -1.04
CYLD-216ENST00000569891 ABCA6Q8N139 1617 aa8.54□□□□□ -1.04
CYLD-216ENST00000569891 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
CYLD-216ENST00000569891 SPAG9O60271 1321 aaKnown RBP8.53□□□□□ -1.04
CYLD-216ENST00000569891 HNRNPMP52272 730 aaKnown RBP eCLIP8.53□□□□□ -1.04
CYLD-216ENST00000569891 RTEL1-TNFRSF6BF6WH68 1400 aa8.53□□□□□ -1.04
CYLD-216ENST00000569891 KDM5CP41229 1560 aa8.53□□□□□ -1.04
CYLD-216ENST00000569891 MROH2AA6NES4 1674 aa8.52□□□□□ -1.05
CYLD-216ENST00000569891 ASXL2Q76L83 1435 aa8.52□□□□□ -1.05
CYLD-216ENST00000569891 NUP155O75694 1391 aa8.52□□□□□ -1.05
CYLD-216ENST00000569891 DUOX2Q9NRD8 1548 aa8.52□□□□□ -1.05
CYLD-216ENST00000569891 GLI2P10070 1586 aa8.52□□□□□ -1.05
CYLD-216ENST00000569891 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms