RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
E4F1-209ENST00000569796 MCCP23508 829 aa21.63■■□□□ 1.05
E4F1-209ENST00000569796 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
E4F1-209ENST00000569796 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
E4F1-209ENST00000569796 ZNF330Q9Y3S2 320 aaPredicted RBP21.61■■□□□ 1.05
E4F1-209ENST00000569796 HSCBQ8IWL3 235 aa21.61■■□□□ 1.05
E4F1-209ENST00000569796 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
E4F1-209ENST00000569796 APBB1O00213 710 aa21.6■■□□□ 1.05
E4F1-209ENST00000569796 CSB-PGBD3P0DP91 1061 aa21.59■■□□□ 1.05
E4F1-209ENST00000569796 HDGFL2Q7Z4V5 671 aaPredicted RBP21.57■■□□□ 1.04
E4F1-209ENST00000569796 CFAP44Q96MT7 982 aa21.57■■□□□ 1.04
E4F1-209ENST00000569796 SPRYD3Q8NCJ5 442 aa21.56■■□□□ 1.04
E4F1-209ENST00000569796 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
E4F1-209ENST00000569796 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
E4F1-209ENST00000569796 GNL2Q13823 731 aaKnown RBP21.54■■□□□ 1.04
E4F1-209ENST00000569796 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
E4F1-209ENST00000569796 CCDC9Q9Y3X0 531 aaKnown RBP21.5■■□□□ 1.03
E4F1-209ENST00000569796 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
E4F1-209ENST00000569796 DRC7Q8IY82 874 aa21.48■■□□□ 1.03
E4F1-209ENST00000569796 ARID3AQ99856 593 aa21.48■■□□□ 1.03
E4F1-209ENST00000569796 PKD2Q13563 968 aa21.48■■□□□ 1.03
E4F1-209ENST00000569796 TNNT3P45378 269 aaPredicted RBP21.48■■□□□ 1.03
E4F1-209ENST00000569796 CUX2O14529 1486 aa21.48■■□□□ 1.03
E4F1-209ENST00000569796 NACADO15069 1562 aa21.47■■□□□ 1.03
E4F1-209ENST00000569796 KIAA1211Q6ZU35 1233 aa21.47■■□□□ 1.03
E4F1-209ENST00000569796 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
E4F1-209ENST00000569796 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.037e-10■□□□□ 10.6
E4F1-209ENST00000569796 FOXD1Q16676 465 aa21.46■■□□□ 1.03
E4F1-209ENST00000569796 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
E4F1-209ENST00000569796 HSPA5P11021 654 aaKnown RBP21.45■■□□□ 1.02
E4F1-209ENST00000569796 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
E4F1-209ENST00000569796 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
E4F1-209ENST00000569796 TMX4Q9H1E5 349 aaPredicted RBP21.43■■□□□ 1.02
E4F1-209ENST00000569796 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
E4F1-209ENST00000569796 CHMP3Q9Y3E7 222 aa21.4■■□□□ 1.02
E4F1-209ENST00000569796 GORABQ5T7V8 394 aa21.39■■□□□ 1.01
E4F1-209ENST00000569796 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
E4F1-209ENST00000569796 ROCK2O75116 1388 aaKnown RBP21.38■■□□□ 1.01
E4F1-209ENST00000569796 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
E4F1-209ENST00000569796 KIAA2012Q0VF49 1180 aa21.37■■□□□ 1.01
E4F1-209ENST00000569796 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
E4F1-209ENST00000569796 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
E4F1-209ENST00000569796 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
E4F1-209ENST00000569796 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
E4F1-209ENST00000569796 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
E4F1-209ENST00000569796 STK31Q9BXU1 1019 aa21.34■■□□□ 1.01
E4F1-209ENST00000569796 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
E4F1-209ENST00000569796 PTMSP20962 102 aa21.33■■□□□ 1.01
E4F1-209ENST00000569796 NUTM2DQ5VT03 806 aaPredicted RBP21.33■■□□□ 1
E4F1-209ENST00000569796 CCER2I3L3R5 266 aa21.32■■□□□ 1
E4F1-209ENST00000569796 EFCAB2Q5VUJ9 269 aa21.32■■□□□ 1
E4F1-209ENST00000569796 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
E4F1-209ENST00000569796 NUP155O75694 1391 aa21.31■■□□□ 1
E4F1-209ENST00000569796 G3V3G9 751 aa21.3■■□□□ 1
E4F1-209ENST00000569796 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
E4F1-209ENST00000569796 RWDD1Q9H446 243 aaPredicted RBP21.3■■□□□ 1
E4F1-209ENST00000569796 EIF3AQ14152 1382 aaKnown RBP21.3■■□□□ 1
E4F1-209ENST00000569796 KIF3BO15066 747 aa21.29■■□□□ 1
E4F1-209ENST00000569796 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
E4F1-209ENST00000569796 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
E4F1-209ENST00000569796 GPATCH3Q96I76 525 aa21.29■■□□□ 1
E4F1-209ENST00000569796 EID1Q9Y6B2 187 aa21.28■■□□□ 1
E4F1-209ENST00000569796 GBP4Q96PP9 640 aa21.27■■□□□ 1
E4F1-209ENST00000569796 RCAN3Q9UKA8 241 aa21.27■■□□□ 1
E4F1-209ENST00000569796 HSP90B1P14625 803 aaKnown RBP21.27■□□□□ 0.99
E4F1-209ENST00000569796 SLC4A10Q6U841 1118 aa21.27■□□□□ 0.99
E4F1-209ENST00000569796 LTV1Q96GA3 475 aaPredicted RBP21.27■□□□□ 0.99
E4F1-209ENST00000569796 SOGA1O94964 1423 aa21.26■□□□□ 0.99
E4F1-209ENST00000569796 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
E4F1-209ENST00000569796 GZF1Q9H116 711 aaPredicted RBP21.26■□□□□ 0.99
E4F1-209ENST00000569796 RALBP1Q15311 655 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 HDAC5Q9UQL6 1122 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
E4F1-209ENST00000569796 AMPHP49418 695 aa21.23■□□□□ 0.99
E4F1-209ENST00000569796 TPM4P67936 248 aa21.23■□□□□ 0.99
E4F1-209ENST00000569796 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
E4F1-209ENST00000569796 NOC3LQ8WTT2 800 aaKnown RBP21.22■□□□□ 0.99
E4F1-209ENST00000569796 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
E4F1-209ENST00000569796 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
E4F1-209ENST00000569796 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
E4F1-209ENST00000569796 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
E4F1-209ENST00000569796 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.99
E4F1-209ENST00000569796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.2■□□□□ 0.99
E4F1-209ENST00000569796 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
E4F1-209ENST00000569796 SYAP1Q96A49 352 aaPredicted RBP21.2■□□□□ 0.98
E4F1-209ENST00000569796 FRAT2O75474 233 aaPredicted RBP21.2■□□□□ 0.98
E4F1-209ENST00000569796 RASSF8Q8NHQ8 419 aa21.2■□□□□ 0.98
E4F1-209ENST00000569796 HMMRO75330 724 aa21.19■□□□□ 0.98
E4F1-209ENST00000569796 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.981e-6■■■□□ 16.8
E4F1-209ENST00000569796 WASHC2CQ9Y4E1 1318 aa21.19■□□□□ 0.98
E4F1-209ENST00000569796 CCDC34Q96HJ3 373 aa21.19■□□□□ 0.98
E4F1-209ENST00000569796 GOLGA6L3A6NEY3 463 aa21.19■□□□□ 0.98
E4F1-209ENST00000569796 TOMM22Q9NS69 142 aa21.19■□□□□ 0.98
E4F1-209ENST00000569796 PDE4CQ08493 712 aa21.18■□□□□ 0.98
E4F1-209ENST00000569796 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
E4F1-209ENST00000569796 PRM3Q9NNZ6 103 aa21.18■□□□□ 0.98
E4F1-209ENST00000569796 GOLGA6L1Q8N7Z2 621 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms